EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000023834 (Gene tree)
Gene ID: 105984316
Gene Symbol: Patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 21671 bases
Position: chrKN672369.1:2088788-2110458
Accession: 105984316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000021852	zf-C2H2	PF00096.26	1.8e-26	1	5
ENSDORP00000021852	zf-C2H2	PF00096.26	1.8e-26	2	5
ENSDORP00000021852	zf-C2H2	PF00096.26	1.8e-26	3	5
ENSDORP00000021852	zf-C2H2	PF00096.26	1.8e-26	4	5
ENSDORP00000021852	zf-C2H2	PF00096.26	1.8e-26	5	5
ENSDORP00000026921	zf-C2H2	PF00096.26	3.6e-20	1	4
ENSDORP00000026921	zf-C2H2	PF00096.26	3.6e-20	2	4
ENSDORP00000026921	zf-C2H2	PF00096.26	3.6e-20	3	4
ENSDORP00000026921	zf-C2H2	PF00096.26	3.6e-20	4	4
ENSDORP00000022811	zf-C2H2	PF00096.26	9.9e-16	1	3
ENSDORP00000022811	zf-C2H2	PF00096.26	9.9e-16	2	3
ENSDORP00000022811	zf-C2H2	PF00096.26	9.9e-16	3	3
ENSDORP00000021852	zf-met	PF12874.7	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000030583	-	3583	XM_013014461	ENSDORP00000021852	687 (aa)	XP_012869915	A0A1S3EZS7
ENSDORT00000035089	-	204	-	ENSDORP00000017739	68 (aa)	-	UPI000BACF10B
ENSDORT00000025709	-	3445	XM_013014460	ENSDORP00000026921	641 (aa)	XP_012869914	A0A1S3F173
ENSDORT00000026928	-	309	-	ENSDORP00000016733	102 (aa)	-	UPI000BACF63F
ENSDORT00000024489	-	2687	XM_013014462	ENSDORP00000022811	537 (aa)	XP_012869916	A0A1S3EZT4

Gene Model

Click here to download ENSDORG00000023834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000023834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000023834	Patz1	82	37.895	ENSDORG00000026644	Zbtb14	57	37.895
ENSDORG00000023834	Patz1	56	35.542	ENSDORG00000006054	Mynn	54	35.542
ENSDORG00000023834	Patz1	74	39.815	ENSDORG00000006492	Zbtb24	69	33.735
ENSDORG00000023834	Patz1	80	46.429	ENSDORG00000005538	Bcl6b	92	46.429
ENSDORG00000023834	Patz1	52	34.118	ENSDORG00000011934	Zfp1	55	38.202
ENSDORG00000023834	Patz1	53	31.050	ENSDORG00000026133	-	90	31.050
ENSDORG00000023834	Patz1	51	31.548	ENSDORG00000009702	Zfp574	50	35.417
ENSDORG00000023834	Patz1	52	35.465	ENSDORG00000007739	Prdm5	81	44.565
ENSDORG00000023834	Patz1	65	31.333	ENSDORG00000023595	Zfp35	81	40.816
ENSDORG00000023834	Patz1	54	33.171	ENSDORG00000009396	Zfp354a	75	33.171
ENSDORG00000023834	Patz1	51	42.045	ENSDORG00000013725	Wt1	76	42.045
ENSDORG00000023834	Patz1	59	31.683	ENSDORG00000024150	-	74	33.333
ENSDORG00000023834	Patz1	79	38.043	ENSDORG00000009677	Zbtb48	86	38.043
ENSDORG00000023834	Patz1	51	30.818	ENSDORG00000027637	Zfp319	79	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000023834	Patz1	100	99.376	ENSG00000100105	PATZ1	100	99.376	Homo_sapiens
ENSDORG00000023834	Patz1	99	60.038	ENSAPOG00000018447	patz1	100	57.478	Acanthochromis_polyacanthus
ENSDORG00000023834	Patz1	100	99.563	ENSAMEG00000007074	PATZ1	100	99.563	Ailuropoda_melanoleuca
ENSDORG00000023834	Patz1	100	60.425	ENSACIG00000016779	patz1	100	60.155	Amphilophus_citrinellus
ENSDORG00000023834	Patz1	100	57.703	ENSAPEG00000013354	patz1	100	57.843	Amphiprion_percula
ENSDORG00000023834	Patz1	100	62.549	ENSATEG00000011260	patz1	100	62.353	Anabas_testudineus
ENSDORG00000023834	Patz1	85	91.781	ENSAPLG00000003934	PATZ1	99	90.753	Anas_platyrhynchos
ENSDORG00000023834	Patz1	100	99.376	ENSANAG00000029603	PATZ1	100	99.376	Aotus_nancymaae
ENSDORG00000023834	Patz1	97	62.712	ENSAMXG00000002273	patz1	98	62.335	Astyanax_mexicanus
ENSDORG00000023834	Patz1	100	99.563	ENSBTAG00000005478	PATZ1	100	99.563	Bos_taurus
ENSDORG00000023834	Patz1	100	99.376	ENSCJAG00000010978	PATZ1	100	99.376	Callithrix_jacchus
ENSDORG00000023834	Patz1	100	99.709	ENSCAFG00000013087	PATZ1	100	99.709	Canis_familiaris
ENSDORG00000023834	Patz1	100	99.127	ENSCHIG00000020203	PATZ1	100	99.127	Capra_hircus
ENSDORG00000023834	Patz1	100	99.272	ENSTSYG00000033183	PATZ1	100	99.272	Carlito_syrichta
ENSDORG00000023834	Patz1	100	99.376	ENSCCAG00000028772	PATZ1	100	99.376	Cebus_capucinus
ENSDORG00000023834	Patz1	100	99.376	ENSCATG00000006101	PATZ1	100	99.376	Cercocebus_atys
ENSDORG00000023834	Patz1	100	89.420	ENSCPBG00000011277	PATZ1	100	88.406	Chrysemys_picta_bellii
ENSDORG00000023834	Patz1	100	99.376	ENSCANG00000024972	PATZ1	100	99.376	Colobus_angolensis_palliatus
ENSDORG00000023834	Patz1	100	97.089	ENSCGRG00001004071	Patz1	100	97.089	Cricetulus_griseus_chok1gshd
ENSDORG00000023834	Patz1	93	97.823	ENSCGRG00000004814	Patz1	100	97.823	Cricetulus_griseus_crigri
ENSDORG00000023834	Patz1	100	55.168	ENSCSEG00000001385	patz1	100	55.139	Cynoglossus_semilaevis
ENSDORG00000023834	Patz1	100	59.145	ENSCVAG00000007684	patz1	100	58.936	Cyprinodon_variegatus
ENSDORG00000023834	Patz1	97	60.679	ENSDARG00000076584	patz1	98	58.663	Danio_rerio
ENSDORG00000023834	Patz1	90	99.031	ENSDNOG00000003183	PATZ1	100	99.031	Dasypus_novemcinctus
ENSDORG00000023834	Patz1	100	99.272	ENSECAG00000025030	PATZ1	100	99.272	Equus_caballus
ENSDORG00000023834	Patz1	99	62.075	ENSELUG00000002333	patz1	100	60.139	Esox_lucius
ENSDORG00000023834	Patz1	100	99.709	ENSFCAG00000030253	PATZ1	100	99.709	Felis_catus
ENSDORG00000023834	Patz1	86	91.864	ENSFALG00000007450	PATZ1	99	90.971	Ficedula_albicollis
ENSDORG00000023834	Patz1	96	97.856	ENSFDAG00000005614	PATZ1	100	97.856	Fukomys_damarensis
ENSDORG00000023834	Patz1	100	57.771	ENSFHEG00000014755	patz1	100	57.771	Fundulus_heteroclitus
ENSDORG00000023834	Patz1	98	55.230	ENSGMOG00000001062	patz1	98	54.848	Gadus_morhua
ENSDORG00000023834	Patz1	100	88.777	ENSGALG00000006934	PATZ1	100	88.058	Gallus_gallus
ENSDORG00000023834	Patz1	100	58.915	ENSGAFG00000010053	patz1	100	58.003	Gambusia_affinis
ENSDORG00000023834	Patz1	85	92.281	ENSGAGG00000003214	PATZ1	100	91.252	Gopherus_agassizii
ENSDORG00000023834	Patz1	100	99.532	ENSGGOG00000017171	PATZ1	100	99.532	Gorilla_gorilla
ENSDORG00000023834	Patz1	98	63.043	ENSHCOG00000017644	patz1	93	58.136	Hippocampus_comes
ENSDORG00000023834	Patz1	97	60.489	ENSIPUG00000017653	patz1	97	59.959	Ictalurus_punctatus
ENSDORG00000023834	Patz1	100	99.376	ENSSTOG00000020707	PATZ1	100	99.376	Ictidomys_tridecemlineatus
ENSDORG00000023834	Patz1	100	97.242	ENSJJAG00000015259	Patz1	100	97.242	Jaculus_jaculus
ENSDORG00000023834	Patz1	100	57.670	ENSKMAG00000008157	patz1	100	57.627	Kryptolebias_marmoratus
ENSDORG00000023834	Patz1	100	98.690	ENSLAFG00000002317	PATZ1	100	98.690	Loxodonta_africana
ENSDORG00000023834	Patz1	100	99.220	ENSMFAG00000040968	PATZ1	100	99.220	Macaca_fascicularis
ENSDORG00000023834	Patz1	100	99.220	ENSMNEG00000037588	PATZ1	100	99.220	Macaca_nemestrina
ENSDORG00000023834	Patz1	100	99.376	ENSMLEG00000030938	PATZ1	100	99.376	Mandrillus_leucophaeus
ENSDORG00000023834	Patz1	100	57.625	ENSMAMG00000023652	patz1	100	57.771	Mastacembelus_armatus
ENSDORG00000023834	Patz1	85	88.034	ENSMGAG00000008439	PATZ1	100	87.009	Meleagris_gallopavo
ENSDORG00000023834	Patz1	100	98.908	ENSMAUG00000004129	Patz1	100	98.908	Mesocricetus_auratus
ENSDORG00000023834	Patz1	100	99.272	ENSMICG00000005430	PATZ1	100	99.272	Microcebus_murinus
ENSDORG00000023834	Patz1	100	98.752	ENSMOCG00000014488	Patz1	100	98.752	Microtus_ochrogaster
ENSDORG00000023834	Patz1	99	55.273	ENSMMOG00000021679	patz1	100	54.690	Mola_mola
ENSDORG00000023834	Patz1	100	57.284	ENSMALG00000021172	patz1	100	56.860	Monopterus_albus
ENSDORG00000023834	Patz1	100	99.064	MGP_CAROLIEiJ_G0016007	Patz1	100	99.064	Mus_caroli
ENSDORG00000023834	Patz1	100	99.220	ENSMUSG00000020453	Patz1	100	99.220	Mus_musculus
ENSDORG00000023834	Patz1	100	99.220	MGP_PahariEiJ_G0016884	Patz1	100	99.220	Mus_pahari
ENSDORG00000023834	Patz1	100	99.220	MGP_SPRETEiJ_G0016846	Patz1	100	99.220	Mus_spretus
ENSDORG00000023834	Patz1	100	99.418	ENSMLUG00000009942	PATZ1	100	99.418	Myotis_lucifugus
ENSDORG00000023834	Patz1	100	99.220	ENSNGAG00000010268	Patz1	100	99.220	Nannospalax_galili
ENSDORG00000023834	Patz1	100	60.232	ENSNBRG00000016032	patz1	100	59.961	Neolamprologus_brichardi
ENSDORG00000023834	Patz1	68	94.194	ENSMEUG00000016293	PATZ1	99	94.181	Notamacropus_eugenii
ENSDORG00000023834	Patz1	100	98.836	ENSODEG00000003589	PATZ1	100	98.836	Octodon_degus
ENSDORG00000023834	Patz1	100	58.918	ENSONIG00000004248	patz1	100	58.712	Oreochromis_niloticus
ENSDORG00000023834	Patz1	100	93.469	ENSOANG00000014654	PATZ1	100	93.759	Ornithorhynchus_anatinus
ENSDORG00000023834	Patz1	100	58.779	ENSORLG00020010937	patz1	100	58.626	Oryzias_latipes_hni
ENSDORG00000023834	Patz1	100	58.150	ENSORLG00015007396	patz1	100	58.003	Oryzias_latipes_hsok
ENSDORG00000023834	Patz1	100	57.459	ENSOMEG00000006636	patz1	100	57.459	Oryzias_melastigma
ENSDORG00000023834	Patz1	100	99.127	ENSOGAG00000027905	PATZ1	100	99.127	Otolemur_garnettii
ENSDORG00000023834	Patz1	100	99.532	ENSPPAG00000033227	PATZ1	100	99.532	Pan_paniscus
ENSDORG00000023834	Patz1	100	99.709	ENSPPRG00000001573	PATZ1	100	99.709	Panthera_pardus
ENSDORG00000023834	Patz1	86	99.663	ENSPTIG00000007937	PATZ1	91	99.663	Panthera_tigris_altaica
ENSDORG00000023834	Patz1	100	99.532	ENSPTRG00000014268	PATZ1	100	99.532	Pan_troglodytes
ENSDORG00000023834	Patz1	100	99.376	ENSPANG00000006821	PATZ1	100	99.272	Papio_anubis
ENSDORG00000023834	Patz1	100	62.313	ENSPKIG00000019584	patz1	100	61.754	Paramormyrops_kingsleyae
ENSDORG00000023834	Patz1	60	83.535	ENSPSIG00000016553	-	91	82.809	Pelodiscus_sinensis
ENSDORG00000023834	Patz1	58	96.212	ENSPSIG00000011562	-	100	96.571	Pelodiscus_sinensis
ENSDORG00000023834	Patz1	100	57.022	ENSPMGG00000010196	patz1	100	57.022	Periophthalmus_magnuspinnatus
ENSDORG00000023834	Patz1	100	98.908	ENSPEMG00000005321	Patz1	100	98.908	Peromyscus_maniculatus_bairdii
ENSDORG00000023834	Patz1	100	57.625	ENSPLAG00000010425	patz1	100	57.771	Poecilia_latipinna
ENSDORG00000023834	Patz1	100	57.709	ENSPMEG00000000255	patz1	100	57.856	Poecilia_mexicana
ENSDORG00000023834	Patz1	100	57.044	ENSPREG00000002440	patz1	100	57.182	Poecilia_reticulata
ENSDORG00000023834	Patz1	100	99.127	ENSPPYG00000011732	PATZ1	100	99.127	Pongo_abelii
ENSDORG00000023834	Patz1	100	99.127	ENSPCOG00000019729	PATZ1	100	99.127	Propithecus_coquereli
ENSDORG00000023834	Patz1	100	99.563	ENSPVAG00000001749	PATZ1	100	99.563	Pteropus_vampyrus
ENSDORG00000023834	Patz1	100	59.384	ENSPNYG00000013542	patz1	100	59.187	Pundamilia_nyererei
ENSDORG00000023834	Patz1	84	60.616	ENSPNAG00000017222	patz1	99	60.552	Pygocentrus_nattereri
ENSDORG00000023834	Patz1	100	99.376	ENSRBIG00000044231	PATZ1	100	99.376	Rhinopithecus_bieti
ENSDORG00000023834	Patz1	100	99.376	ENSRROG00000037155	PATZ1	100	99.376	Rhinopithecus_roxellana
ENSDORG00000023834	Patz1	100	99.376	ENSSBOG00000003894	PATZ1	100	99.376	Saimiri_boliviensis_boliviensis
ENSDORG00000023834	Patz1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSDORG00000023834	Patz1	100	87.198	ENSSPUG00000015298	PATZ1	100	86.344	Sphenodon_punctatus
ENSDORG00000023834	Patz1	85	99.141	ENSSSCG00000010027	PATZ1	100	99.141	Sus_scrofa
ENSDORG00000023834	Patz1	100	58.207	ENSTRUG00000015366	patz1	100	57.931	Takifugu_rubripes
ENSDORG00000023834	Patz1	100	99.563	ENSTTRG00000010279	PATZ1	100	99.563	Tursiops_truncatus
ENSDORG00000023834	Patz1	100	99.688	ENSUAMG00000015014	PATZ1	100	99.688	Ursus_americanus
ENSDORG00000023834	Patz1	100	73.188	ENSXETG00000004190	patz1	100	72.464	Xenopus_tropicalis
ENSDORG00000023834	Patz1	100	58.003	ENSXMAG00000015531	patz1	100	58.150	Xiphophorus_maculatus