EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000023857 (Gene tree)
Gene ID: 105989925
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 13524 bases
Position: chrKN672407.1:1114175-1127698
Accession: 105989925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000024564	PRP38	PF03371.15	3.6e-39	1	2
ENSDORP00000024564	PRP38	PF03371.15	3.6e-39	2	2
ENSDORP00000023454	PRP38	PF03371.15	4.2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000025359	-	813	XM_013022194	ENSDORP00000024564	270 (aa)	XP_012877648	UPI000BAD0573
ENSDORT00000026249	-	768	-	ENSDORP00000023454	255 (aa)	-	UPI000BAD2298

Gene Model

Click here to download ENSDORG00000023857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000023857's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000023857	-	82	68.821	ENSDORG00000025371	-	62	95.833
ENSDORG00000023857	-	82	68.821	ENSDORG00000023691	-	62	95.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000023857	-	100	86.538	ENSG00000134748	PRPF38A	100	86.538	Homo_sapiens
ENSDORG00000023857	-	64	96.875	ENSAPOG00000011652	prpf38a	85	96.875	Acanthochromis_polyacanthus
ENSDORG00000023857	-	100	86.538	ENSAMEG00000009319	PRPF38A	100	86.538	Ailuropoda_melanoleuca
ENSDORG00000023857	-	66	70.776	ENSACIG00000012292	prpf38a	76	70.742	Amphilophus_citrinellus
ENSDORG00000023857	-	64	96.875	ENSAOCG00000018004	prpf38a	85	96.875	Amphiprion_ocellaris
ENSDORG00000023857	-	64	96.875	ENSAPEG00000021414	prpf38a	85	96.875	Amphiprion_percula
ENSDORG00000023857	-	64	97.917	ENSATEG00000004608	prpf38a	85	97.917	Anabas_testudineus
ENSDORG00000023857	-	76	80.567	ENSAPLG00000005827	PRPF38A	81	100.000	Anas_platyrhynchos
ENSDORG00000023857	-	100	97.917	ENSACAG00000008249	PRPF38A	100	82.692	Anolis_carolinensis
ENSDORG00000023857	-	100	57.093	ENSANAG00000029204	-	100	57.292	Aotus_nancymaae
ENSDORG00000023857	-	100	86.538	ENSANAG00000027839	PRPF38A	100	86.538	Aotus_nancymaae
ENSDORG00000023857	-	64	95.833	ENSACLG00000021595	prpf38a	85	95.833	Astatotilapia_calliptera
ENSDORG00000023857	-	100	97.917	ENSAMXG00000029274	prpf38a	100	70.607	Astyanax_mexicanus
ENSDORG00000023857	-	100	86.538	ENSBTAG00000002720	PRPF38A	100	86.538	Bos_taurus
ENSDORG00000023857	-	57	50.256	WBGene00008380	prp-38	67	50.463	Caenorhabditis_elegans
ENSDORG00000023857	-	100	86.538	ENSCJAG00000021594	PRPF38A	100	86.538	Callithrix_jacchus
ENSDORG00000023857	-	100	86.538	ENSCAFG00000003740	PRPF38A	100	86.538	Canis_familiaris
ENSDORG00000023857	-	100	86.538	ENSCAFG00020010939	PRPF38A	100	86.538	Canis_lupus_dingo
ENSDORG00000023857	-	100	86.538	ENSCHIG00000024730	PRPF38A	100	86.538	Capra_hircus
ENSDORG00000023857	-	100	86.538	ENSTSYG00000009868	-	100	86.538	Carlito_syrichta
ENSDORG00000023857	-	83	98.113	ENSTSYG00000031994	-	95	83.643	Carlito_syrichta
ENSDORG00000023857	-	100	86.538	ENSCPOG00000005079	PRPF38A	100	86.538	Cavia_porcellus
ENSDORG00000023857	-	100	85.577	ENSCCAG00000026502	PRPF38A	100	85.577	Cebus_capucinus
ENSDORG00000023857	-	100	56.856	ENSCATG00000044190	-	100	56.667	Cercocebus_atys
ENSDORG00000023857	-	100	86.538	ENSCATG00000032296	PRPF38A	100	86.538	Cercocebus_atys
ENSDORG00000023857	-	100	86.538	ENSCLAG00000005816	PRPF38A	100	86.538	Chinchilla_lanigera
ENSDORG00000023857	-	95	97.917	ENSCHOG00000008388	PRPF38A	77	97.917	Choloepus_hoffmanni
ENSDORG00000023857	-	100	84.615	ENSCPBG00000014791	PRPF38A	100	84.615	Chrysemys_picta_bellii
ENSDORG00000023857	-	62	57.619	ENSCSAVG00000009580	-	78	53.390	Ciona_savignyi
ENSDORG00000023857	-	95	91.558	ENSCANG00000032608	PRPF38A	77	81.818	Colobus_angolensis_palliatus
ENSDORG00000023857	-	70	75.688	ENSCGRG00001002557	-	78	75.688	Cricetulus_griseus_chok1gshd
ENSDORG00000023857	-	100	86.218	ENSCGRG00001018502	-	100	86.218	Cricetulus_griseus_chok1gshd
ENSDORG00000023857	-	100	86.218	ENSCGRG00000014868	Prpf38a	100	86.218	Cricetulus_griseus_crigri
ENSDORG00000023857	-	66	71.233	ENSCSEG00000001269	prpf38a	79	71.179	Cynoglossus_semilaevis
ENSDORG00000023857	-	64	97.917	ENSCVAG00000012305	prpf38a	85	97.917	Cyprinodon_variegatus
ENSDORG00000023857	-	100	95.833	ENSDARG00000039213	prpf38a	85	95.833	Danio_rerio
ENSDORG00000023857	-	100	86.538	ENSDNOG00000042326	PRPF38A	100	86.538	Dasypus_novemcinctus
ENSDORG00000023857	-	57	60.406	FBgn0050342	Prp38	57	60.638	Drosophila_melanogaster
ENSDORG00000023857	-	72	66.807	ENSEBUG00000012588	prpf38a	75	66.094	Eptatretus_burgeri
ENSDORG00000023857	-	100	86.538	ENSEASG00005014427	PRPF38A	100	86.538	Equus_asinus_asinus
ENSDORG00000023857	-	100	86.538	ENSECAG00000022628	PRPF38A	100	86.538	Equus_caballus
ENSDORG00000023857	-	64	96.875	ENSELUG00000021094	prpf38a	85	96.875	Esox_lucius
ENSDORG00000023857	-	100	86.538	ENSFCAG00000002518	PRPF38A	100	86.538	Felis_catus
ENSDORG00000023857	-	85	81.181	ENSFALG00000005598	-	100	81.181	Ficedula_albicollis
ENSDORG00000023857	-	99	72.026	ENSFALG00000003612	-	77	72.727	Ficedula_albicollis
ENSDORG00000023857	-	100	86.218	ENSFDAG00000011287	PRPF38A	100	86.218	Fukomys_damarensis
ENSDORG00000023857	-	63	96.875	ENSFHEG00000014317	prpf38a	71	96.875	Fundulus_heteroclitus
ENSDORG00000023857	-	100	84.295	ENSGALG00000010627	PRPF38A	100	84.295	Gallus_gallus
ENSDORG00000023857	-	80	97.917	ENSGAFG00000012422	prpf38a	85	97.917	Gambusia_affinis
ENSDORG00000023857	-	95	85.088	ENSGACG00000005423	prpf38a	89	88.073	Gasterosteus_aculeatus
ENSDORG00000023857	-	100	84.936	ENSGAGG00000020547	PRPF38A	100	84.936	Gopherus_agassizii
ENSDORG00000023857	-	100	86.538	ENSGGOG00000003940	PRPF38A	100	86.538	Gorilla_gorilla
ENSDORG00000023857	-	52	95.833	ENSHBUG00000020572	prpf38a	59	95.833	Haplochromis_burtoni
ENSDORG00000023857	-	100	73.510	ENSHGLG00000007918	-	100	74.172	Heterocephalus_glaber_female
ENSDORG00000023857	-	100	86.538	ENSHGLG00000000475	PRPF38A	100	86.538	Heterocephalus_glaber_female
ENSDORG00000023857	-	100	73.510	ENSHGLG00100003928	-	100	74.172	Heterocephalus_glaber_male
ENSDORG00000023857	-	100	86.538	ENSHGLG00100008935	PRPF38A	100	86.538	Heterocephalus_glaber_male
ENSDORG00000023857	-	85	55.882	ENSHCOG00000020781	prpf38a	59	70.745	Hippocampus_comes
ENSDORG00000023857	-	95	96.875	ENSIPUG00000005757	prpf38a	85	96.875	Ictalurus_punctatus
ENSDORG00000023857	-	100	86.538	ENSSTOG00000015610	PRPF38A	100	86.538	Ictidomys_tridecemlineatus
ENSDORG00000023857	-	100	85.256	ENSJJAG00000015811	Prpf38a	100	85.256	Jaculus_jaculus
ENSDORG00000023857	-	64	96.875	ENSKMAG00000006588	prpf38a	85	96.875	Kryptolebias_marmoratus
ENSDORG00000023857	-	95	94.792	ENSLBEG00000020585	prpf38a	85	94.792	Labrus_bergylta
ENSDORG00000023857	-	100	96.875	ENSLACG00000011495	PRPF38A	100	80.128	Latimeria_chalumnae
ENSDORG00000023857	-	100	68.371	ENSLOCG00000006262	prpf38a	100	69.649	Lepisosteus_oculatus
ENSDORG00000023857	-	100	86.538	ENSLAFG00000025862	PRPF38A	100	86.538	Loxodonta_africana
ENSDORG00000023857	-	100	86.538	ENSMFAG00000039449	PRPF38A	100	86.538	Macaca_fascicularis
ENSDORG00000023857	-	85	83.824	ENSMMUG00000014333	PRPF38A	98	83.824	Macaca_mulatta
ENSDORG00000023857	-	100	57.191	ENSMNEG00000040242	-	100	56.856	Macaca_nemestrina
ENSDORG00000023857	-	100	86.538	ENSMNEG00000031221	PRPF38A	100	86.538	Macaca_nemestrina
ENSDORG00000023857	-	100	86.538	ENSMLEG00000041105	PRPF38A	100	86.538	Mandrillus_leucophaeus
ENSDORG00000023857	-	80	96.875	ENSMAMG00000015431	prpf38a	100	69.010	Mastacembelus_armatus
ENSDORG00000023857	-	64	95.833	ENSMZEG00005017838	prpf38a	85	95.833	Maylandia_zebra
ENSDORG00000023857	-	95	97.917	ENSMGAG00000011176	PRPF38A	100	83.612	Meleagris_gallopavo
ENSDORG00000023857	-	82	79.545	ENSMAUG00000018029	-	87	77.489	Mesocricetus_auratus
ENSDORG00000023857	-	100	86.538	ENSMICG00000014193	PRPF38A	100	86.538	Microcebus_murinus
ENSDORG00000023857	-	100	86.218	ENSMOCG00000013080	Prpf38a	100	86.218	Microtus_ochrogaster
ENSDORG00000023857	-	80	96.875	ENSMMOG00000016972	prpf38a	74	96.875	Mola_mola
ENSDORG00000023857	-	100	83.387	ENSMODG00000000644	PRPF38A	100	84.984	Monodelphis_domestica
ENSDORG00000023857	-	64	95.833	ENSMALG00000019363	prpf38a	82	95.833	Monopterus_albus
ENSDORG00000023857	-	100	98.958	MGP_CAROLIEiJ_G0026269	Prpf38a	100	85.256	Mus_caroli
ENSDORG00000023857	-	100	98.958	ENSMUSG00000063800	Prpf38a	100	85.256	Mus_musculus
ENSDORG00000023857	-	100	98.958	MGP_PahariEiJ_G0028602	Prpf38a	100	85.256	Mus_pahari
ENSDORG00000023857	-	100	98.958	MGP_SPRETEiJ_G0027238	Prpf38a	100	84.936	Mus_spretus
ENSDORG00000023857	-	100	86.538	ENSMPUG00000006896	PRPF38A	100	86.538	Mustela_putorius_furo
ENSDORG00000023857	-	100	86.218	ENSNGAG00000011884	Prpf38a	100	86.218	Nannospalax_galili
ENSDORG00000023857	-	66	68.950	ENSNBRG00000004013	prpf38a	74	68.996	Neolamprologus_brichardi
ENSDORG00000023857	-	91	85.467	ENSNLEG00000017999	PRPF38A	93	85.467	Nomascus_leucogenys
ENSDORG00000023857	-	100	70.290	ENSNLEG00000033398	-	94	70.290	Nomascus_leucogenys
ENSDORG00000023857	-	96	73.432	ENSNLEG00000012592	-	99	73.432	Nomascus_leucogenys
ENSDORG00000023857	-	100	81.410	ENSMEUG00000003860	PRPF38A	100	81.410	Notamacropus_eugenii
ENSDORG00000023857	-	67	100.000	ENSOPRG00000008985	PRPF38A	96	81.385	Ochotona_princeps
ENSDORG00000023857	-	100	86.538	ENSODEG00000005869	PRPF38A	100	86.538	Octodon_degus
ENSDORG00000023857	-	64	96.875	ENSONIG00000007816	prpf38a	85	96.875	Oreochromis_niloticus
ENSDORG00000023857	-	100	64.103	ENSOANG00000009541	-	100	64.103	Ornithorhynchus_anatinus
ENSDORG00000023857	-	100	86.538	ENSOCUG00000000963	PRPF38A	100	86.538	Oryctolagus_cuniculus
ENSDORG00000023857	-	95	97.917	ENSORLG00000013485	prpf38a	84	97.917	Oryzias_latipes
ENSDORG00000023857	-	95	97.917	ENSORLG00020002130	prpf38a	84	97.917	Oryzias_latipes_hni
ENSDORG00000023857	-	95	97.917	ENSORLG00015021393	prpf38a	84	97.917	Oryzias_latipes_hsok
ENSDORG00000023857	-	95	96.875	ENSOMEG00000016333	prpf38a	85	96.875	Oryzias_melastigma
ENSDORG00000023857	-	100	86.538	ENSOGAG00000005423	PRPF38A	100	86.538	Otolemur_garnettii
ENSDORG00000023857	-	100	86.538	ENSOARG00000005373	PRPF38A	100	86.538	Ovis_aries
ENSDORG00000023857	-	100	86.538	ENSPPAG00000030905	PRPF38A	100	86.538	Pan_paniscus
ENSDORG00000023857	-	100	70.569	ENSPPAG00000033867	-	100	70.569	Pan_paniscus
ENSDORG00000023857	-	100	86.538	ENSPPRG00000013268	PRPF38A	100	86.538	Panthera_pardus
ENSDORG00000023857	-	100	86.538	ENSPTIG00000015419	PRPF38A	100	86.538	Panthera_tigris_altaica
ENSDORG00000023857	-	100	86.538	ENSPTRG00000000739	PRPF38A	100	86.538	Pan_troglodytes
ENSDORG00000023857	-	100	86.538	ENSPANG00000015483	PRPF38A	100	86.538	Papio_anubis
ENSDORG00000023857	-	100	67.308	ENSPKIG00000011439	prpf38a	100	68.590	Paramormyrops_kingsleyae
ENSDORG00000023857	-	100	84.295	ENSPSIG00000017487	PRPF38A	100	84.295	Pelodiscus_sinensis
ENSDORG00000023857	-	65	73.148	ENSPMGG00000021352	prpf38a	99	67.208	Periophthalmus_magnuspinnatus
ENSDORG00000023857	-	100	83.934	ENSPEMG00000011212	-	100	83.934	Peromyscus_maniculatus_bairdii
ENSDORG00000023857	-	100	86.218	ENSPEMG00000023277	-	100	86.218	Peromyscus_maniculatus_bairdii
ENSDORG00000023857	-	100	83.387	ENSPCIG00000022369	-	100	84.984	Phascolarctos_cinereus
ENSDORG00000023857	-	79	97.917	ENSPFOG00000004248	prpf38a	85	97.917	Poecilia_formosa
ENSDORG00000023857	-	64	97.917	ENSPLAG00000010328	prpf38a	85	97.917	Poecilia_latipinna
ENSDORG00000023857	-	64	97.917	ENSPMEG00000011804	prpf38a	85	97.917	Poecilia_mexicana
ENSDORG00000023857	-	94	97.917	ENSPREG00000002835	prpf38a	92	63.576	Poecilia_reticulata
ENSDORG00000023857	-	100	78.233	ENSPPYG00000001348	PRPF38A	100	78.233	Pongo_abelii
ENSDORG00000023857	-	100	85.897	ENSPCAG00000013328	PRPF38A	100	85.897	Procavia_capensis
ENSDORG00000023857	-	100	65.385	ENSPCOG00000020709	-	76	65.801	Propithecus_coquereli
ENSDORG00000023857	-	100	86.538	ENSPCOG00000016387	-	100	86.538	Propithecus_coquereli
ENSDORG00000023857	-	100	86.538	ENSPVAG00000009803	PRPF38A	100	86.538	Pteropus_vampyrus
ENSDORG00000023857	-	64	95.833	ENSPNYG00000005571	prpf38a	85	95.833	Pundamilia_nyererei
ENSDORG00000023857	-	100	96.875	ENSPNAG00000010399	prpf38a	100	70.607	Pygocentrus_nattereri
ENSDORG00000023857	-	100	85.897	ENSRNOG00000009451	Prpf38a	100	85.897	Rattus_norvegicus
ENSDORG00000023857	-	95	91.558	ENSRBIG00000036442	PRPF38A	100	86.538	Rhinopithecus_bieti
ENSDORG00000023857	-	100	74.419	ENSRBIG00000034053	-	100	72.868	Rhinopithecus_bieti
ENSDORG00000023857	-	100	75.194	ENSRROG00000034606	-	100	73.643	Rhinopithecus_roxellana
ENSDORG00000023857	-	98	66.993	ENSRROG00000040003	-	99	59.477	Rhinopithecus_roxellana
ENSDORG00000023857	-	100	86.538	ENSRROG00000032788	PRPF38A	100	86.538	Rhinopithecus_roxellana
ENSDORG00000023857	-	100	86.538	ENSSBOG00000019515	PRPF38A	100	86.538	Saimiri_boliviensis_boliviensis
ENSDORG00000023857	-	84	98.148	ENSSHAG00000006906	-	100	82.288	Sarcophilus_harrisii
ENSDORG00000023857	-	96	59.539	ENSSHAG00000006029	-	74	66.063	Sarcophilus_harrisii
ENSDORG00000023857	-	100	97.917	ENSSFOG00015013572	prpf38a	100	68.051	Scleropages_formosus
ENSDORG00000023857	-	64	98.958	ENSSMAG00000015379	prpf38a	84	98.958	Scophthalmus_maximus
ENSDORG00000023857	-	64	97.917	ENSSDUG00000001324	prpf38a	85	97.917	Seriola_dumerili
ENSDORG00000023857	-	64	97.917	ENSSLDG00000014803	prpf38a	85	97.917	Seriola_lalandi_dorsalis
ENSDORG00000023857	-	83	100.000	ENSSARG00000014458	PRPF38A	100	71.111	Sorex_araneus
ENSDORG00000023857	-	100	82.692	ENSSPUG00000013259	PRPF38A	100	82.692	Sphenodon_punctatus
ENSDORG00000023857	-	66	87.151	ENSSPAG00000010449	prpf38a	100	71.852	Stegastes_partitus
ENSDORG00000023857	-	100	86.538	ENSSSCG00000028288	PRPF38A	100	86.538	Sus_scrofa
ENSDORG00000023857	-	100	80.128	ENSTGUG00000008995	PRPF38A	100	80.128	Taeniopygia_guttata
ENSDORG00000023857	-	72	96.875	ENSTRUG00000003374	prpf38a	63	96.875	Takifugu_rubripes
ENSDORG00000023857	-	66	69.955	ENSTNIG00000005533	prpf38a	84	95.833	Tetraodon_nigroviridis
ENSDORG00000023857	-	100	85.897	ENSTBEG00000000725	PRPF38A	100	85.897	Tupaia_belangeri
ENSDORG00000023857	-	100	86.538	ENSTTRG00000016139	PRPF38A	100	86.538	Tursiops_truncatus
ENSDORG00000023857	-	100	86.538	ENSUAMG00000000625	PRPF38A	100	86.538	Ursus_americanus
ENSDORG00000023857	-	100	86.538	ENSUMAG00000022674	PRPF38A	100	86.538	Ursus_maritimus
ENSDORG00000023857	-	70	81.385	ENSVPAG00000000907	PRPF38A	100	80.769	Vicugna_pacos
ENSDORG00000023857	-	100	86.538	ENSVVUG00000004475	PRPF38A	100	86.538	Vulpes_vulpes
ENSDORG00000023857	-	100	96.875	ENSXETG00000008060	prpf38a	85	96.875	Xenopus_tropicalis
ENSDORG00000023857	-	66	72.398	ENSXCOG00000007393	prpf38a	77	72.294	Xiphophorus_couchianus
ENSDORG00000023857	-	64	97.917	ENSXMAG00000026143	prpf38a	85	97.917	Xiphophorus_maculatus