EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000023909 (Gene tree)
Gene ID: -
Gene Symbol: Spen
Alias: Mint
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 55055 bases
Position: chrKN672407.1:10459308-10514362
Accession: 105989955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000026524	RRM_1	PF00076.22	8.9e-28	1	3
ENSDORP00000026524	RRM_1	PF00076.22	8.9e-28	2	3
ENSDORP00000026524	RRM_1	PF00076.22	8.9e-28	3	3
ENSDORP00000026371	RRM_1	PF00076.22	2.3e-23	1	2
ENSDORP00000026371	RRM_1	PF00076.22	2.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000030872	-	10524	XM_013022225	ENSDORP00000026524	3507 (aa)	XP_012877679	UPI000BAD2B56
ENSDORT00000029685	-	10347	-	ENSDORP00000026371	3448 (aa)	-	UPI000BAD0B25

Gene Model

Click here to download ENSDORG00000023909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000023909's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000023909	Spen	99	80.295	ENSG00000065526	SPEN	96	98.955	Homo_sapiens
ENSDORG00000023909	Spen	81	83.626	ENSAPOG00000011411	si:ch1073-335m2.2	85	83.626	Acanthochromis_polyacanthus
ENSDORG00000023909	Spen	96	77.241	ENSAPOG00000009853	-	81	71.667	Acanthochromis_polyacanthus
ENSDORG00000023909	Spen	99	79.470	ENSAMEG00000011817	SPEN	99	79.220	Ailuropoda_melanoleuca
ENSDORG00000023909	Spen	82	77.778	ENSAOCG00000008077	si:ch1073-335m2.2	82	77.778	Amphiprion_ocellaris
ENSDORG00000023909	Spen	96	77.241	ENSAOCG00000014505	-	96	44.195	Amphiprion_ocellaris
ENSDORG00000023909	Spen	89	77.241	ENSAPEG00000010288	-	96	44.178	Amphiprion_percula
ENSDORG00000023909	Spen	81	83.626	ENSAPEG00000013515	si:ch1073-335m2.2	87	83.626	Amphiprion_percula
ENSDORG00000023909	Spen	73	84.615	ENSATEG00000007674	si:ch1073-335m2.2	72	84.615	Anabas_testudineus
ENSDORG00000023909	Spen	97	78.621	ENSATEG00000005627	-	90	47.321	Anabas_testudineus
ENSDORG00000023909	Spen	100	64.294	ENSAPLG00000012618	SPEN	99	64.168	Anas_platyrhynchos
ENSDORG00000023909	Spen	100	57.684	ENSACAG00000013761	SPEN	99	57.872	Anolis_carolinensis
ENSDORG00000023909	Spen	99	79.608	ENSANAG00000034428	SPEN	99	77.481	Aotus_nancymaae
ENSDORG00000023909	Spen	76	84.211	ENSACLG00000021433	si:ch1073-335m2.2	85	84.211	Astatotilapia_calliptera
ENSDORG00000023909	Spen	91	77.241	ENSACLG00000016922	-	90	45.962	Astatotilapia_calliptera
ENSDORG00000023909	Spen	99	79.452	ENSAMXG00000012485	spen	99	43.619	Astyanax_mexicanus
ENSDORG00000023909	Spen	99	79.619	ENSBTAG00000018729	SPEN	99	79.647	Bos_taurus
ENSDORG00000023909	Spen	99	79.173	ENSCJAG00000008527	SPEN	99	76.965	Callithrix_jacchus
ENSDORG00000023909	Spen	87	77.166	ENSCAFG00000016132	-	98	76.799	Canis_familiaris
ENSDORG00000023909	Spen	99	80.188	ENSCHIG00000025070	SPEN	99	79.873	Capra_hircus
ENSDORG00000023909	Spen	92	78.177	ENSTSYG00000036016	SPEN	99	76.533	Carlito_syrichta
ENSDORG00000023909	Spen	100	76.897	ENSCAPG00000013803	SPEN	99	76.934	Cavia_aperea
ENSDORG00000023909	Spen	100	75.458	ENSCPOG00000014036	SPEN	100	76.175	Cavia_porcellus
ENSDORG00000023909	Spen	99	75.929	ENSCCAG00000020258	SPEN	99	74.571	Cebus_capucinus
ENSDORG00000023909	Spen	95	100.000	ENSCATG00000015079	SPEN	99	99.029	Cercocebus_atys
ENSDORG00000023909	Spen	100	77.862	ENSCLAG00000002018	SPEN	100	77.356	Chinchilla_lanigera
ENSDORG00000023909	Spen	99	80.300	ENSCSAG00000000841	SPEN	99	78.291	Chlorocebus_sabaeus
ENSDORG00000023909	Spen	100	64.703	ENSCPBG00000010477	SPEN	99	65.048	Chrysemys_picta_bellii
ENSDORG00000023909	Spen	99	80.011	ENSCANG00000034547	SPEN	99	77.854	Colobus_angolensis_palliatus
ENSDORG00000023909	Spen	99	77.713	ENSCGRG00001007725	Spen	99	77.713	Cricetulus_griseus_chok1gshd
ENSDORG00000023909	Spen	99	77.131	ENSCGRG00000010581	Spen	100	76.938	Cricetulus_griseus_crigri
ENSDORG00000023909	Spen	96	80.690	ENSCSEG00000003915	-	89	45.742	Cynoglossus_semilaevis
ENSDORG00000023909	Spen	87	62.182	ENSCVAG00000009075	si:ch1073-335m2.2	94	62.182	Cyprinodon_variegatus
ENSDORG00000023909	Spen	100	41.669	ENSCVAG00000016346	-	93	45.899	Cyprinodon_variegatus
ENSDORG00000023909	Spen	71	63.600	ENSDARG00000074332	si:ch1073-335m2.2	75	63.600	Danio_rerio
ENSDORG00000023909	Spen	97	67.470	ENSDARG00000074245	spen	81	84.545	Danio_rerio
ENSDORG00000023909	Spen	99	79.221	ENSDNOG00000041948	SPEN	99	83.695	Dasypus_novemcinctus
ENSDORG00000023909	Spen	68	96.491	ENSETEG00000016692	-	66	96.639	Echinops_telfairi
ENSDORG00000023909	Spen	95	100.000	ENSEASG00005015911	SPEN	99	100.000	Equus_asinus_asinus
ENSDORG00000023909	Spen	95	100.000	ENSECAG00000008833	SPEN	99	100.000	Equus_caballus
ENSDORG00000023909	Spen	72	95.349	ENSEEUG00000010255	SPEN	76	95.349	Erinaceus_europaeus
ENSDORG00000023909	Spen	82	64.032	ENSELUG00000007726	si:ch1073-335m2.2	87	64.032	Esox_lucius
ENSDORG00000023909	Spen	89	61.229	ENSFALG00000003551	SPEN	100	61.103	Ficedula_albicollis
ENSDORG00000023909	Spen	99	78.091	ENSFDAG00000010212	SPEN	74	78.368	Fukomys_damarensis
ENSDORG00000023909	Spen	86	73.206	ENSFHEG00000004544	si:ch1073-335m2.2	86	73.206	Fundulus_heteroclitus
ENSDORG00000023909	Spen	79	75.342	ENSGMOG00000008397	-	84	75.342	Gadus_morhua
ENSDORG00000023909	Spen	79	80.447	ENSGMOG00000008156	si:ch1073-335m2.2	83	80.447	Gadus_morhua
ENSDORG00000023909	Spen	100	64.227	ENSGALG00000036932	SPEN	99	64.020	Gallus_gallus
ENSDORG00000023909	Spen	96	43.553	ENSGAFG00000015819	-	81	70.833	Gambusia_affinis
ENSDORG00000023909	Spen	71	84.024	ENSGAFG00000021570	si:ch1073-335m2.2	85	84.024	Gambusia_affinis
ENSDORG00000023909	Spen	97	44.473	ENSGACG00000005341	-	99	44.777	Gasterosteus_aculeatus
ENSDORG00000023909	Spen	62	81.176	ENSGACG00000001176	si:ch1073-335m2.2	63	81.176	Gasterosteus_aculeatus
ENSDORG00000023909	Spen	100	64.979	ENSGAGG00000020785	SPEN	99	67.089	Gopherus_agassizii
ENSDORG00000023909	Spen	99	80.339	ENSGGOG00000012041	SPEN	99	77.957	Gorilla_gorilla
ENSDORG00000023909	Spen	96	77.241	ENSHBUG00000020626	-	90	45.922	Haplochromis_burtoni
ENSDORG00000023909	Spen	82	84.211	ENSHBUG00000023253	si:ch1073-335m2.2	81	84.211	Haplochromis_burtoni
ENSDORG00000023909	Spen	99	76.906	ENSHGLG00000019259	SPEN	99	76.648	Heterocephalus_glaber_female
ENSDORG00000023909	Spen	89	81.117	ENSHGLG00100019294	SPEN	95	81.117	Heterocephalus_glaber_male
ENSDORG00000023909	Spen	81	67.059	ENSHCOG00000006004	si:ch1073-335m2.2	83	81.250	Hippocampus_comes
ENSDORG00000023909	Spen	72	77.273	ENSIPUG00000018212	si:ch1073-335m2.2	77	77.273	Ictalurus_punctatus
ENSDORG00000023909	Spen	99	78.912	ENSIPUG00000021668	spen	95	78.000	Ictalurus_punctatus
ENSDORG00000023909	Spen	99	81.710	ENSSTOG00000021428	SPEN	100	81.798	Ictidomys_tridecemlineatus
ENSDORG00000023909	Spen	99	80.055	ENSJJAG00000010882	Spen	99	80.443	Jaculus_jaculus
ENSDORG00000023909	Spen	88	83.041	ENSKMAG00000021725	si:ch1073-335m2.2	84	83.041	Kryptolebias_marmoratus
ENSDORG00000023909	Spen	97	76.552	ENSKMAG00000003882	-	89	45.235	Kryptolebias_marmoratus
ENSDORG00000023909	Spen	75	77.348	ENSLBEG00000020855	si:ch1073-335m2.2	81	81.065	Labrus_bergylta
ENSDORG00000023909	Spen	75	41.901	ENSLBEG00000019129	-	88	42.117	Labrus_bergylta
ENSDORG00000023909	Spen	96	81.863	ENSLACG00000003258	SPEN	99	81.863	Latimeria_chalumnae
ENSDORG00000023909	Spen	97	51.603	ENSLOCG00000007896	si:ch1073-335m2.2	97	51.279	Lepisosteus_oculatus
ENSDORG00000023909	Spen	99	79.117	ENSLAFG00000004524	SPEN	99	82.720	Loxodonta_africana
ENSDORG00000023909	Spen	99	80.044	ENSMFAG00000041974	SPEN	99	77.884	Macaca_fascicularis
ENSDORG00000023909	Spen	99	80.071	ENSMMUG00000008026	SPEN	99	77.911	Macaca_mulatta
ENSDORG00000023909	Spen	99	80.207	ENSMNEG00000042402	SPEN	99	78.047	Macaca_nemestrina
ENSDORG00000023909	Spen	99	80.355	ENSMLEG00000039293	SPEN	99	77.993	Mandrillus_leucophaeus
ENSDORG00000023909	Spen	79	83.832	ENSMAMG00000023870	si:ch1073-335m2.2	85	83.832	Mastacembelus_armatus
ENSDORG00000023909	Spen	76	84.211	ENSMZEG00005011762	si:ch1073-335m2.2	85	84.211	Maylandia_zebra
ENSDORG00000023909	Spen	82	42.523	ENSMZEG00005021491	-	90	42.803	Maylandia_zebra
ENSDORG00000023909	Spen	99	77.282	ENSMAUG00000008318	Spen	99	77.081	Mesocricetus_auratus
ENSDORG00000023909	Spen	99	80.416	ENSMICG00000030994	SPEN	99	78.378	Microcebus_murinus
ENSDORG00000023909	Spen	99	77.955	ENSMOCG00000016083	Spen	99	77.790	Microtus_ochrogaster
ENSDORG00000023909	Spen	100	63.724	ENSMODG00000003411	SPEN	99	63.846	Monodelphis_domestica
ENSDORG00000023909	Spen	96	77.931	ENSMALG00000008625	-	89	46.697	Monopterus_albus
ENSDORG00000023909	Spen	99	77.150	MGP_CAROLIEiJ_G0026745	Spen	99	76.929	Mus_caroli
ENSDORG00000023909	Spen	99	76.671	ENSMUSG00000040761	Spen	99	76.726	Mus_musculus
ENSDORG00000023909	Spen	99	76.396	MGP_PahariEiJ_G0029076	Spen	99	76.259	Mus_pahari
ENSDORG00000023909	Spen	99	76.995	MGP_SPRETEiJ_G0027724	Spen	99	76.885	Mus_spretus
ENSDORG00000023909	Spen	99	78.910	ENSMPUG00000016317	SPEN	100	78.221	Mustela_putorius_furo
ENSDORG00000023909	Spen	94	77.912	ENSMLUG00000010144	SPEN	99	93.738	Myotis_lucifugus
ENSDORG00000023909	Spen	98	80.540	ENSNGAG00000000641	Spen	99	80.540	Nannospalax_galili
ENSDORG00000023909	Spen	77	84.211	ENSNBRG00000005733	si:ch1073-335m2.2	82	84.211	Neolamprologus_brichardi
ENSDORG00000023909	Spen	83	41.942	ENSNBRG00000022090	-	90	42.004	Neolamprologus_brichardi
ENSDORG00000023909	Spen	99	80.229	ENSNLEG00000007652	SPEN	99	77.829	Nomascus_leucogenys
ENSDORG00000023909	Spen	91	93.750	ENSMEUG00000002422	SPEN	91	93.750	Notamacropus_eugenii
ENSDORG00000023909	Spen	93	85.727	ENSOPRG00000015800	SPEN	93	85.727	Ochotona_princeps
ENSDORG00000023909	Spen	100	77.496	ENSODEG00000016644	SPEN	99	77.681	Octodon_degus
ENSDORG00000023909	Spen	97	44.778	ENSONIG00000006573	-	95	79.924	Oreochromis_niloticus
ENSDORG00000023909	Spen	100	77.020	ENSOCUG00000010840	SPEN	99	77.184	Oryctolagus_cuniculus
ENSDORG00000023909	Spen	89	37.790	ENSORLG00000028894	-	96	40.646	Oryzias_latipes
ENSDORG00000023909	Spen	79	81.871	ENSORLG00000018414	si:ch1073-335m2.2	87	63.636	Oryzias_latipes
ENSDORG00000023909	Spen	89	38.300	ENSORLG00020007735	-	96	40.757	Oryzias_latipes_hni
ENSDORG00000023909	Spen	75	81.871	ENSORLG00020009351	si:ch1073-335m2.2	87	63.636	Oryzias_latipes_hni
ENSDORG00000023909	Spen	75	81.988	ENSORLG00015005537	si:ch1073-335m2.2	85	66.516	Oryzias_latipes_hsok
ENSDORG00000023909	Spen	96	77.665	ENSORLG00015022085	-	94	77.665	Oryzias_latipes_hsok
ENSDORG00000023909	Spen	78	83.908	ENSOMEG00000007639	-	77	83.908	Oryzias_melastigma
ENSDORG00000023909	Spen	83	69.856	ENSOMEG00000004509	si:ch1073-335m2.2	85	69.856	Oryzias_melastigma
ENSDORG00000023909	Spen	99	80.060	ENSOGAG00000025110	SPEN	99	78.306	Otolemur_garnettii
ENSDORG00000023909	Spen	99	79.567	ENSOARG00000008477	SPEN	99	79.310	Ovis_aries
ENSDORG00000023909	Spen	99	80.306	ENSPPAG00000035690	SPEN	99	77.942	Pan_paniscus
ENSDORG00000023909	Spen	99	80.267	ENSPTRG00000000210	SPEN	99	77.942	Pan_troglodytes
ENSDORG00000023909	Spen	99	78.980	ENSPANG00000006293	SPEN	99	76.629	Papio_anubis
ENSDORG00000023909	Spen	94	84.043	ENSPKIG00000002617	SPEN	98	84.043	Paramormyrops_kingsleyae
ENSDORG00000023909	Spen	100	46.594	ENSPKIG00000010492	si:ch1073-335m2.2	88	80.769	Paramormyrops_kingsleyae
ENSDORG00000023909	Spen	100	63.626	ENSPSIG00000008026	SPEN	99	63.492	Pelodiscus_sinensis
ENSDORG00000023909	Spen	99	77.704	ENSPEMG00000022997	Spen	100	77.621	Peromyscus_maniculatus_bairdii
ENSDORG00000023909	Spen	75	85.207	ENSPFOG00000017986	si:ch1073-335m2.2	86	85.207	Poecilia_formosa
ENSDORG00000023909	Spen	83	85.207	ENSPLAG00000016625	si:ch1073-335m2.2	82	85.207	Poecilia_latipinna
ENSDORG00000023909	Spen	77	85.207	ENSPMEG00000002674	si:ch1073-335m2.2	94	85.207	Poecilia_mexicana
ENSDORG00000023909	Spen	96	43.602	ENSPMEG00000006764	-	81	70.833	Poecilia_mexicana
ENSDORG00000023909	Spen	96	43.864	ENSPREG00000010399	-	81	70.833	Poecilia_reticulata
ENSDORG00000023909	Spen	89	85.207	ENSPREG00000005357	si:ch1073-335m2.2	95	85.207	Poecilia_reticulata
ENSDORG00000023909	Spen	99	80.562	ENSPPYG00000001834	SPEN	99	78.209	Pongo_abelii
ENSDORG00000023909	Spen	88	90.714	ENSPCAG00000009543	SPEN	92	85.933	Procavia_capensis
ENSDORG00000023909	Spen	99	79.421	ENSPCOG00000021735	SPEN	99	77.625	Propithecus_coquereli
ENSDORG00000023909	Spen	81	89.264	ENSPVAG00000013794	SPEN	82	89.329	Pteropus_vampyrus
ENSDORG00000023909	Spen	76	84.211	ENSPNYG00000009042	si:ch1073-335m2.2	86	84.211	Pundamilia_nyererei
ENSDORG00000023909	Spen	96	77.241	ENSPNYG00000012379	-	90	45.922	Pundamilia_nyererei
ENSDORG00000023909	Spen	88	70.476	ENSPNAG00000011452	si:ch1073-335m2.2	88	70.476	Pygocentrus_nattereri
ENSDORG00000023909	Spen	99	80.556	ENSPNAG00000020795	spen	78	75.104	Pygocentrus_nattereri
ENSDORG00000023909	Spen	99	76.989	ENSRNOG00000033556	Spen	100	76.395	Rattus_norvegicus
ENSDORG00000023909	Spen	99	80.515	ENSRBIG00000039654	SPEN	99	77.991	Rhinopithecus_bieti
ENSDORG00000023909	Spen	99	80.207	ENSRROG00000035686	SPEN	100	77.756	Rhinopithecus_roxellana
ENSDORG00000023909	Spen	98	85.373	ENSSBOG00000028770	SPEN	99	85.373	Saimiri_boliviensis_boliviensis
ENSDORG00000023909	Spen	100	64.347	ENSSHAG00000004960	SPEN	99	93.169	Sarcophilus_harrisii
ENSDORG00000023909	Spen	90	89.655	ENSSFOG00015010267	si:ch1073-335m2.2	93	55.525	Scleropages_formosus
ENSDORG00000023909	Spen	88	40.953	ENSSFOG00015007131	si:ch1073-335m2.2	95	47.708	Scleropages_formosus
ENSDORG00000023909	Spen	89	77.931	ENSSMAG00000008996	-	89	47.134	Scophthalmus_maximus
ENSDORG00000023909	Spen	62	73.077	ENSSMAG00000000125	si:ch1073-335m2.2	88	73.077	Scophthalmus_maximus
ENSDORG00000023909	Spen	85	74.038	ENSSDUG00000008416	si:ch1073-335m2.2	85	83.626	Seriola_dumerili
ENSDORG00000023909	Spen	96	78.621	ENSSDUG00000003476	-	81	72.727	Seriola_dumerili
ENSDORG00000023909	Spen	89	78.621	ENSSLDG00000012950	-	81	72.727	Seriola_lalandi_dorsalis
ENSDORG00000023909	Spen	85	73.558	ENSSLDG00000023347	si:ch1073-335m2.2	86	73.558	Seriola_lalandi_dorsalis
ENSDORG00000023909	Spen	89	61.581	ENSSPUG00000001866	-	99	66.519	Sphenodon_punctatus
ENSDORG00000023909	Spen	85	84.211	ENSSPAG00000012454	si:ch1073-335m2.2	92	84.211	Stegastes_partitus
ENSDORG00000023909	Spen	99	77.241	ENSSPAG00000006014	-	81	71.667	Stegastes_partitus
ENSDORG00000023909	Spen	85	78.805	ENSSSCG00000034484	SPEN	99	78.537	Sus_scrofa
ENSDORG00000023909	Spen	96	42.641	ENSTRUG00000024350	-	90	44.907	Takifugu_rubripes
ENSDORG00000023909	Spen	52	80.226	ENSTRUG00000021008	si:ch1073-335m2.2	64	80.226	Takifugu_rubripes
ENSDORG00000023909	Spen	94	72.774	ENSTNIG00000010907	-	89	73.028	Tetraodon_nigroviridis
ENSDORG00000023909	Spen	84	82.456	ENSTNIG00000014666	si:ch1073-335m2.2	83	82.456	Tetraodon_nigroviridis
ENSDORG00000023909	Spen	74	99.275	ENSTBEG00000003628	SPEN	77	93.925	Tupaia_belangeri
ENSDORG00000023909	Spen	81	96.279	ENSTTRG00000015704	SPEN	79	96.279	Tursiops_truncatus
ENSDORG00000023909	Spen	99	79.679	ENSUAMG00000009600	SPEN	99	79.542	Ursus_americanus
ENSDORG00000023909	Spen	100	78.664	ENSUMAG00000021641	SPEN	99	78.438	Ursus_maritimus
ENSDORG00000023909	Spen	95	100.000	ENSVVUG00000028951	SPEN	99	100.000	Vulpes_vulpes
ENSDORG00000023909	Spen	66	84.024	ENSXCOG00000004516	si:ch1073-335m2.2	81	84.024	Xiphophorus_couchianus
ENSDORG00000023909	Spen	79	84.024	ENSXMAG00000029887	si:ch1073-335m2.2	85	84.024	Xiphophorus_maculatus
ENSDORG00000023909	Spen	96	43.361	ENSXMAG00000021384	-	81	68.750	Xiphophorus_maculatus