EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000023928 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 528 bases
Position: chrKN672547.1:2560461-2560988
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000023562	RRM_1	PF00076.22	3.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000036363	-	435	-	ENSDORP00000023562	144 (aa)	-	UPI000BACF815

Gene Model

Click here to download ENSDORG00000023928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000023928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000023928	-	92	72.455	ENSDORG00000028966	-	58	73.596

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000023928	-	85	91.803	ENSG00000100836	PABPN1	79	91.729	Homo_sapiens
ENSDORG00000023928	-	85	81.967	ENSAPOG00000016425	pabpn1	56	82.707	Acanthochromis_polyacanthus
ENSDORG00000023928	-	85	91.803	ENSAMEG00000007048	BCL2L2-PABPN1	70	91.729	Ailuropoda_melanoleuca
ENSDORG00000023928	-	85	81.967	ENSACIG00000021744	pabpn1	74	82.707	Amphilophus_citrinellus
ENSDORG00000023928	-	85	81.967	ENSAOCG00000015805	pabpn1	56	82.707	Amphiprion_ocellaris
ENSDORG00000023928	-	85	81.967	ENSAPEG00000009623	pabpn1	56	82.707	Amphiprion_percula
ENSDORG00000023928	-	85	81.967	ENSATEG00000020531	pabpn1	56	82.707	Anabas_testudineus
ENSDORG00000023928	-	85	83.607	ENSAMXG00000000452	pabpn1	74	84.211	Astyanax_mexicanus
ENSDORG00000023928	-	92	80.690	ENSBTAG00000050594	-	62	81.410	Bos_taurus
ENSDORG00000023928	-	85	90.984	ENSBTAG00000053753	-	50	90.977	Bos_taurus
ENSDORG00000023928	-	90	58.015	WBGene00003904	pabp-2	64	58.015	Caenorhabditis_elegans
ENSDORG00000023928	-	85	89.344	ENSCJAG00000004407	-	67	89.474	Callithrix_jacchus
ENSDORG00000023928	-	85	91.803	ENSTSYG00000033996	BCL2L2-PABPN1	75	91.729	Carlito_syrichta
ENSDORG00000023928	-	73	92.381	ENSCAPG00000009461	-	75	92.381	Cavia_aperea
ENSDORG00000023928	-	85	81.148	ENSCHOG00000004798	BCL2L2-PABPN1	57	81.955	Choloepus_hoffmanni
ENSDORG00000023928	-	85	89.344	ENSCPBG00000026060	-	75	89.474	Chrysemys_picta_bellii
ENSDORG00000023928	-	90	63.077	ENSCING00000012468	-	74	52.976	Ciona_intestinalis
ENSDORG00000023928	-	90	60.769	ENSCSAVG00000002001	-	79	60.606	Ciona_savignyi
ENSDORG00000023928	-	85	91.803	ENSCANG00000009750	BCL2L2-PABPN1	75	91.729	Colobus_angolensis_palliatus
ENSDORG00000023928	-	85	90.984	ENSCGRG00001019696	Pabpn1	75	90.977	Cricetulus_griseus_chok1gshd
ENSDORG00000023928	-	85	90.984	ENSCGRG00000011102	Pabpn1	83	90.977	Cricetulus_griseus_crigri
ENSDORG00000023928	-	85	81.148	ENSCSEG00000008774	pabpn1	57	81.955	Cynoglossus_semilaevis
ENSDORG00000023928	-	85	81.967	ENSCVAG00000003152	pabpn1	56	82.707	Cyprinodon_variegatus
ENSDORG00000023928	-	85	82.787	ENSDARG00000045373	pabpn1	60	83.459	Danio_rerio
ENSDORG00000023928	-	85	59.350	ENSDARG00000087996	pabpn1l	75	59.350	Danio_rerio
ENSDORG00000023928	-	90	64.615	FBgn0005648	Pabp2	58	64.615	Drosophila_melanogaster
ENSDORG00000023928	-	100	62.570	ENSEBUG00000002322	pabpn1	77	62.570	Eptatretus_burgeri
ENSDORG00000023928	-	92	69.277	ENSEEUG00000012973	-	60	70.621	Erinaceus_europaeus
ENSDORG00000023928	-	85	85.246	ENSELUG00000022654	pabpn1	55	85.714	Esox_lucius
ENSDORG00000023928	-	85	92.623	ENSFDAG00000018381	BCL2L2-PABPN1	75	92.481	Fukomys_damarensis
ENSDORG00000023928	-	85	80.328	ENSFHEG00000007215	pabpn1	57	81.203	Fundulus_heteroclitus
ENSDORG00000023928	-	85	81.967	ENSGAFG00000017099	pabpn1	56	82.707	Gambusia_affinis
ENSDORG00000023928	-	85	82.114	ENSGACG00000002167	pabpn1	54	82.836	Gasterosteus_aculeatus
ENSDORG00000023928	-	92	74.242	ENSGGOG00000025919	-	77	74.825	Gorilla_gorilla
ENSDORG00000023928	-	85	81.967	ENSHBUG00000019523	pabpn1	56	82.707	Haplochromis_burtoni
ENSDORG00000023928	-	85	92.623	ENSHGLG00000002927	-	84	92.481	Heterocephalus_glaber_female
ENSDORG00000023928	-	92	74.658	ENSHGLG00000018588	-	59	75.796	Heterocephalus_glaber_female
ENSDORG00000023928	-	92	63.522	ENSHGLG00000009842	-	100	65.294	Heterocephalus_glaber_female
ENSDORG00000023928	-	85	92.623	ENSHGLG00100006673	-	84	92.481	Heterocephalus_glaber_male
ENSDORG00000023928	-	85	86.066	ENSHGLG00100018935	-	74	86.466	Heterocephalus_glaber_male
ENSDORG00000023928	-	92	74.658	ENSHGLG00100015565	-	60	75.796	Heterocephalus_glaber_male
ENSDORG00000023928	-	92	63.855	ENSHCOG00000004655	pabpn1	76	65.537	Hippocampus_comes
ENSDORG00000023928	-	85	80.328	ENSIPUG00000000180	-	58	81.203	Ictalurus_punctatus
ENSDORG00000023928	-	85	82.787	ENSIPUG00000008085	PABPN1	56	83.459	Ictalurus_punctatus
ENSDORG00000023928	-	85	91.803	ENSSTOG00000029847	BCL2L2-PABPN1	75	91.729	Ictidomys_tridecemlineatus
ENSDORG00000023928	-	85	91.803	ENSJJAG00000023507	Gm20521	75	91.729	Jaculus_jaculus
ENSDORG00000023928	-	85	81.967	ENSKMAG00000018748	pabpn1	56	82.707	Kryptolebias_marmoratus
ENSDORG00000023928	-	85	81.967	ENSLBEG00000027266	pabpn1	56	82.707	Labrus_bergylta
ENSDORG00000023928	-	85	85.366	ENSLACG00000000646	pabpn1	59	85.821	Latimeria_chalumnae
ENSDORG00000023928	-	92	62.879	ENSLOCG00000004694	pabpn1l	61	62.879	Lepisosteus_oculatus
ENSDORG00000023928	-	74	90.566	ENSLAFG00000031227	-	70	90.566	Loxodonta_africana
ENSDORG00000023928	-	85	91.803	ENSMFAG00000032183	BCL2L2-PABPN1	75	91.729	Macaca_fascicularis
ENSDORG00000023928	-	67	87.500	ENSMFAG00000031355	-	67	87.500	Macaca_fascicularis
ENSDORG00000023928	-	85	91.803	ENSMMUG00000014747	BCL2L2-PABPN1	69	91.089	Macaca_mulatta
ENSDORG00000023928	-	85	78.049	ENSMNEG00000035750	-	67	87.500	Macaca_nemestrina
ENSDORG00000023928	-	85	91.803	ENSMLEG00000043862	BCL2L2-PABPN1	75	91.729	Mandrillus_leucophaeus
ENSDORG00000023928	-	93	71.642	ENSMLEG00000034623	-	77	80.374	Mandrillus_leucophaeus
ENSDORG00000023928	-	85	90.984	ENSMOCG00000018557	Gm20521	81	90.977	Microtus_ochrogaster
ENSDORG00000023928	-	85	81.967	ENSMMOG00000005405	pabpn1	56	82.707	Mola_mola
ENSDORG00000023928	-	85	90.984	MGP_CAROLIEiJ_G0019277	Pabpn1	81	90.977	Mus_caroli
ENSDORG00000023928	-	85	90.984	ENSMUSG00000022194	Pabpn1	81	90.977	Mus_musculus
ENSDORG00000023928	-	85	90.984	MGP_PahariEiJ_G0030295	Pabpn1	100	85.714	Mus_pahari
ENSDORG00000023928	-	85	90.984	MGP_SPRETEiJ_G0020166	Pabpn1	81	90.977	Mus_spretus
ENSDORG00000023928	-	85	91.803	ENSMPUG00000006775	-	79	91.729	Mustela_putorius_furo
ENSDORG00000023928	-	92	90.977	ENSMLUG00000003800	-	70	90.977	Myotis_lucifugus
ENSDORG00000023928	-	85	81.967	ENSNBRG00000023955	pabpn1	74	82.707	Neolamprologus_brichardi
ENSDORG00000023928	-	79	55.000	ENSNLEG00000035292	-	99	55.000	Nomascus_leucogenys
ENSDORG00000023928	-	88	70.139	ENSNLEG00000030598	-	64	70.186	Nomascus_leucogenys
ENSDORG00000023928	-	92	68.153	ENSODEG00000003739	-	59	69.643	Octodon_degus
ENSDORG00000023928	-	92	81.203	ENSODEG00000011555	-	71	81.203	Octodon_degus
ENSDORG00000023928	-	70	90.099	ENSOANG00000009218	-	69	90.099	Ornithorhynchus_anatinus
ENSDORG00000023928	-	85	81.967	ENSORLG00000027900	pabpn1	56	82.707	Oryzias_latipes
ENSDORG00000023928	-	85	81.967	ENSORLG00015000018	pabpn1	56	82.707	Oryzias_latipes_hsok
ENSDORG00000023928	-	85	75.410	ENSPPAG00000039421	-	72	76.692	Pan_paniscus
ENSDORG00000023928	-	85	91.803	ENSPPAG00000028984	BCL2L2-PABPN1	79	91.729	Pan_paniscus
ENSDORG00000023928	-	85	91.803	ENSPTIG00000001063	BCL2L2-PABPN1	75	91.729	Panthera_tigris_altaica
ENSDORG00000023928	-	85	77.236	ENSPANG00000023326	-	67	87.500	Papio_anubis
ENSDORG00000023928	-	85	82.787	ENSPKIG00000018052	pabpn1	56	83.459	Paramormyrops_kingsleyae
ENSDORG00000023928	-	97	63.309	ENSPKIG00000008340	pabpn1l	68	63.309	Paramormyrops_kingsleyae
ENSDORG00000023928	-	74	83.019	ENSPSIG00000011959	-	77	83.019	Pelodiscus_sinensis
ENSDORG00000023928	-	85	90.984	ENSPEMG00000008332	Gm20521	81	90.977	Peromyscus_maniculatus_bairdii
ENSDORG00000023928	-	90	79.231	ENSPMAG00000006212	pabpn1	55	78.947	Petromyzon_marinus
ENSDORG00000023928	-	85	81.967	ENSPFOG00000010351	pabpn1	56	82.707	Poecilia_formosa
ENSDORG00000023928	-	85	81.967	ENSPMEG00000020856	pabpn1	56	82.707	Poecilia_mexicana
ENSDORG00000023928	-	85	81.967	ENSPREG00000011278	pabpn1	56	82.707	Poecilia_reticulata
ENSDORG00000023928	-	85	81.967	ENSPNYG00000013182	pabpn1	56	82.707	Pundamilia_nyererei
ENSDORG00000023928	-	85	83.607	ENSPNAG00000023526	pabpn1	56	84.211	Pygocentrus_nattereri
ENSDORG00000023928	-	90	65.649	ENSPNAG00000021666	pabpn1l	66	65.926	Pygocentrus_nattereri
ENSDORG00000023928	-	78	81.250	ENSRBIG00000042811	-	54	78.195	Rhinopithecus_bieti
ENSDORG00000023928	-	85	91.803	ENSRROG00000045535	BCL2L2-PABPN1	75	91.729	Rhinopithecus_roxellana
ENSDORG00000023928	-	85	91.803	ENSSBOG00000026930	BCL2L2-PABPN1	79	91.729	Saimiri_boliviensis_boliviensis
ENSDORG00000023928	-	92	68.421	ENSSHAG00000007707	-	56	68.421	Sarcophilus_harrisii
ENSDORG00000023928	-	85	89.344	ENSSHAG00000014841	-	61	89.474	Sarcophilus_harrisii
ENSDORG00000023928	-	85	81.967	ENSSFOG00015012565	pabpn1	59	82.707	Scleropages_formosus
ENSDORG00000023928	-	85	81.967	ENSSFOG00015014718	pabpn1	56	82.707	Scleropages_formosus
ENSDORG00000023928	-	90	65.385	ENSSFOG00015015833	pabpn1l	60	65.152	Scleropages_formosus
ENSDORG00000023928	-	85	81.967	ENSSMAG00000020157	pabpn1	56	82.707	Scophthalmus_maximus
ENSDORG00000023928	-	85	81.967	ENSSLDG00000007118	pabpn1	56	82.707	Seriola_lalandi_dorsalis
ENSDORG00000023928	-	85	88.525	ENSSPUG00000018308	-	78	85.714	Sphenodon_punctatus
ENSDORG00000023928	-	85	81.967	ENSSPAG00000021658	pabpn1	56	82.707	Stegastes_partitus
ENSDORG00000023928	-	98	75.177	ENSSSCG00000034805	-	57	75.177	Sus_scrofa
ENSDORG00000023928	-	71	70.588	ENSSSCG00000038472	-	72	70.588	Sus_scrofa
ENSDORG00000023928	-	85	82.787	ENSTRUG00000023664	pabpn1	56	83.459	Takifugu_rubripes
ENSDORG00000023928	-	85	83.607	ENSTNIG00000005369	pabpn1	61	84.211	Tetraodon_nigroviridis
ENSDORG00000023928	-	85	91.803	ENSVVUG00000019912	BCL2L2-PABPN1	52	91.729	Vulpes_vulpes
ENSDORG00000023928	-	73	83.810	ENSXCOG00000005158	pabpn1	62	83.810	Xiphophorus_couchianus
ENSDORG00000023928	-	85	81.967	ENSXMAG00000006196	pabpn1	56	82.707	Xiphophorus_maculatus