EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000024034 (Gene tree)
Gene ID: 105982851
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 7128 bases
Position: chrKN672363.1:16067259-16074386
Accession: 105982851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000017602	RRM_1	PF00076.22	1.1e-28	1	2
ENSDORP00000017602	RRM_1	PF00076.22	1.1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000023997	-	3677	XM_013012558	ENSDORP00000017602	934 (aa)	XP_012868012	A0A1S3EUB0

Gene Model

Click here to download ENSDORG00000024034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000024034's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000024034	-	54	72.414	ENSDORG00000028509	-	55	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000024034	-	100	80.449	ENSG00000183808	RBM12B	100	97.561	Homo_sapiens
ENSDORG00000024034	-	60	48.052	ENSAPOG00000013963	rbm12b	86	48.052	Acanthochromis_polyacanthus
ENSDORG00000024034	-	100	71.489	ENSAMEG00000007134	RBM12B	100	74.573	Ailuropoda_melanoleuca
ENSDORG00000024034	-	53	40.575	ENSACIG00000014943	rbm12b	99	40.575	Amphilophus_citrinellus
ENSDORG00000024034	-	60	50.649	ENSAOCG00000024270	rbm12b	86	50.649	Amphiprion_ocellaris
ENSDORG00000024034	-	59	46.269	ENSAPEG00000022079	rbm12b	98	39.877	Amphiprion_percula
ENSDORG00000024034	-	60	48.052	ENSATEG00000004578	rbm12b	85	48.052	Anabas_testudineus
ENSDORG00000024034	-	76	60.417	ENSAPLG00000002020	RBM12B	100	60.417	Anas_platyrhynchos
ENSDORG00000024034	-	92	43.056	ENSACAG00000003463	RBM12B	100	37.303	Anolis_carolinensis
ENSDORG00000024034	-	100	75.000	ENSANAG00000034015	RBM12B	100	75.855	Aotus_nancymaae
ENSDORG00000024034	-	59	48.052	ENSACLG00000005578	rbm12b	78	48.052	Astatotilapia_calliptera
ENSDORG00000024034	-	60	48.052	ENSACLG00000005575	rbm12b	84	48.052	Astatotilapia_calliptera
ENSDORG00000024034	-	60	41.558	ENSAMXG00000041973	rbm12b	87	41.598	Astyanax_mexicanus
ENSDORG00000024034	-	100	72.388	ENSBTAG00000013408	RBM12B	100	76.094	Bos_taurus
ENSDORG00000024034	-	100	76.884	ENSCAFG00000009109	RBM12B	100	74.171	Canis_familiaris
ENSDORG00000024034	-	100	74.121	ENSCAFG00020012203	RBM12B	100	77.350	Canis_lupus_dingo
ENSDORG00000024034	-	82	79.630	ENSCHIG00000006790	RBM12B	88	79.630	Capra_hircus
ENSDORG00000024034	-	100	78.477	ENSTSYG00000012515	RBM12B	100	78.071	Carlito_syrichta
ENSDORG00000024034	-	100	80.918	ENSCAPG00000003543	RBM12B	100	80.918	Cavia_aperea
ENSDORG00000024034	-	100	80.918	ENSCPOG00000007815	RBM12B	100	80.918	Cavia_porcellus
ENSDORG00000024034	-	100	72.892	ENSCATG00000030769	RBM12B	100	78.015	Cercocebus_atys
ENSDORG00000024034	-	100	81.543	ENSCLAG00000017617	RBM12B	100	81.543	Chinchilla_lanigera
ENSDORG00000024034	-	100	78.743	ENSCSAG00000018559	RBM12B	100	75.449	Chlorocebus_sabaeus
ENSDORG00000024034	-	99	77.895	ENSCHOG00000008934	RBM12B	100	77.220	Choloepus_hoffmanni
ENSDORG00000024034	-	75	58.042	ENSCPBG00000003061	RBM12B	100	58.042	Chrysemys_picta_bellii
ENSDORG00000024034	-	100	72.921	ENSCANG00000030379	RBM12B	100	77.908	Colobus_angolensis_palliatus
ENSDORG00000024034	-	100	67.983	ENSCGRG00001008710	-	97	69.904	Cricetulus_griseus_chok1gshd
ENSDORG00000024034	-	66	40.458	ENSCSEG00000004610	rbm12b	88	40.458	Cynoglossus_semilaevis
ENSDORG00000024034	-	51	33.190	ENSCVAG00000009259	-	99	33.190	Cyprinodon_variegatus
ENSDORG00000024034	-	60	48.052	ENSCVAG00000011047	rbm12b	86	48.052	Cyprinodon_variegatus
ENSDORG00000024034	-	61	44.156	ENSDARG00000079717	rbm12b	82	44.156	Danio_rerio
ENSDORG00000024034	-	100	74.851	ENSDNOG00000041608	RBM12B	100	71.584	Dasypus_novemcinctus
ENSDORG00000024034	-	66	69.628	ENSETEG00000013005	-	83	69.952	Echinops_telfairi
ENSDORG00000024034	-	100	76.720	ENSEASG00005016297	RBM12B	100	78.762	Equus_asinus_asinus
ENSDORG00000024034	-	100	79.529	ENSECAG00000017870	RBM12B	100	77.073	Equus_caballus
ENSDORG00000024034	-	100	76.923	ENSFCAG00000029274	RBM12B	100	77.350	Felis_catus
ENSDORG00000024034	-	75	58.993	ENSFALG00000014893	RBM12B	100	58.993	Ficedula_albicollis
ENSDORG00000024034	-	100	80.567	ENSFDAG00000005576	RBM12B	97	80.567	Fukomys_damarensis
ENSDORG00000024034	-	60	49.351	ENSFHEG00000016425	rbm12b	85	49.351	Fundulus_heteroclitus
ENSDORG00000024034	-	60	44.737	ENSGMOG00000013467	rbm12b	86	45.333	Gadus_morhua
ENSDORG00000024034	-	76	57.718	ENSGALG00000035129	RBM12B	100	57.718	Gallus_gallus
ENSDORG00000024034	-	60	49.351	ENSGAFG00000007224	rbm12b	86	49.351	Gambusia_affinis
ENSDORG00000024034	-	51	30.196	ENSGAFG00000007845	zgc:153215	98	30.196	Gambusia_affinis
ENSDORG00000024034	-	60	45.455	ENSGACG00000008682	rbm12b	85	45.455	Gasterosteus_aculeatus
ENSDORG00000024034	-	75	57.241	ENSGAGG00000009774	RBM12B	100	57.241	Gopherus_agassizii
ENSDORG00000024034	-	100	74.574	ENSGGOG00000011909	RBM12B	100	78.252	Gorilla_gorilla
ENSDORG00000024034	-	60	48.052	ENSHBUG00000016227	rbm12b	84	48.052	Haplochromis_burtoni
ENSDORG00000024034	-	100	80.579	ENSHGLG00000009063	RBM12B	100	80.579	Heterocephalus_glaber_female
ENSDORG00000024034	-	100	80.579	ENSHGLG00100021324	RBM12B	100	80.579	Heterocephalus_glaber_male
ENSDORG00000024034	-	63	47.573	ENSHCOG00000014952	rbm12b	92	47.573	Hippocampus_comes
ENSDORG00000024034	-	72	46.067	ENSIPUG00000001167	RBM12B	97	46.067	Ictalurus_punctatus
ENSDORG00000024034	-	100	72.641	ENSSTOG00000027445	RBM12B	100	75.880	Ictidomys_tridecemlineatus
ENSDORG00000024034	-	100	75.962	ENSJJAG00000004165	-	100	75.962	Jaculus_jaculus
ENSDORG00000024034	-	69	38.845	ENSKMAG00000013715	rbm12b	99	38.554	Kryptolebias_marmoratus
ENSDORG00000024034	-	69	39.442	ENSKMAG00000013704	rbm12b	96	39.157	Kryptolebias_marmoratus
ENSDORG00000024034	-	64	67.949	ENSLACG00000007177	RBM12B	96	60.360	Latimeria_chalumnae
ENSDORG00000024034	-	60	50.649	ENSLOCG00000018344	rbm12b	86	50.649	Lepisosteus_oculatus
ENSDORG00000024034	-	100	68.538	ENSLAFG00000029949	RBM12B	100	70.362	Loxodonta_africana
ENSDORG00000024034	-	100	73.036	ENSMFAG00000045430	RBM12B	100	78.228	Macaca_fascicularis
ENSDORG00000024034	-	100	80.449	ENSMMUG00000005558	RBM12B	100	80.235	Macaca_mulatta
ENSDORG00000024034	-	100	73.036	ENSMNEG00000041292	RBM12B	100	78.228	Macaca_nemestrina
ENSDORG00000024034	-	100	75.159	ENSMLEG00000037288	RBM12B	100	79.318	Mandrillus_leucophaeus
ENSDORG00000024034	-	62	46.939	ENSMAMG00000011998	rbm12b	89	46.939	Mastacembelus_armatus
ENSDORG00000024034	-	63	45.946	ENSMZEG00005014845	rbm12b	90	45.946	Maylandia_zebra
ENSDORG00000024034	-	60	48.052	ENSMZEG00005015005	rbm12b	86	48.052	Maylandia_zebra
ENSDORG00000024034	-	52	56.977	ENSMGAG00000011985	RBM12B	99	56.202	Meleagris_gallopavo
ENSDORG00000024034	-	100	69.691	ENSMAUG00000021752	-	100	70.544	Mesocricetus_auratus
ENSDORG00000024034	-	100	74.252	ENSMICG00000036969	RBM12B	100	75.855	Microcebus_murinus
ENSDORG00000024034	-	100	71.135	ENSMOCG00000005603	-	100	69.723	Microtus_ochrogaster
ENSDORG00000024034	-	60	63.636	ENSMMOG00000002404	rbm12b	82	63.636	Mola_mola
ENSDORG00000024034	-	87	64.865	ENSMODG00000007436	RBM12B	98	64.865	Monodelphis_domestica
ENSDORG00000024034	-	66	52.564	ENSMALG00000012059	rbm12b	93	52.564	Monopterus_albus
ENSDORG00000024034	-	100	64.537	ENSMUSG00000046667	Rbm12b1	100	65.282	Mus_musculus
ENSDORG00000024034	-	100	64.931	ENSMUSG00000052137	Rbm12b2	100	65.815	Mus_musculus
ENSDORG00000024034	-	100	63.898	MGP_SPRETEiJ_G0026766	-	100	65.815	Mus_spretus
ENSDORG00000024034	-	100	66.982	MGP_SPRETEiJ_G0026765	-	100	67.975	Mus_spretus
ENSDORG00000024034	-	100	78.022	ENSMPUG00000018637	RBM12B	100	77.822	Mustela_putorius_furo
ENSDORG00000024034	-	100	71.984	ENSMLUG00000002359	RBM12B	100	72.367	Myotis_lucifugus
ENSDORG00000024034	-	100	79.872	ENSNGAG00000002801	-	100	79.872	Nannospalax_galili
ENSDORG00000024034	-	63	48.052	ENSNBRG00000015057	rbm12b	91	48.052	Neolamprologus_brichardi
ENSDORG00000024034	-	100	79.340	ENSNLEG00000032050	RBM12B	100	79.127	Nomascus_leucogenys
ENSDORG00000024034	-	100	80.709	ENSODEG00000019204	RBM12B	100	80.709	Octodon_degus
ENSDORG00000024034	-	63	49.351	ENSONIG00000020612	rbm12b	91	49.351	Oreochromis_niloticus
ENSDORG00000024034	-	77	62.667	ENSOANG00000015735	-	97	62.667	Ornithorhynchus_anatinus
ENSDORG00000024034	-	100	74.334	ENSOCUG00000010353	RBM12B	100	76.784	Oryctolagus_cuniculus
ENSDORG00000024034	-	60	49.351	ENSORLG00000008228	rbm12b	83	49.351	Oryzias_latipes
ENSDORG00000024034	-	69	38.229	ENSORLG00020013619	rbm12b	97	38.229	Oryzias_latipes_hni
ENSDORG00000024034	-	60	49.351	ENSORLG00015019999	rbm12b	83	49.351	Oryzias_latipes_hsok
ENSDORG00000024034	-	60	50.649	ENSOMEG00000022523	rbm12b	83	50.649	Oryzias_melastigma
ENSDORG00000024034	-	100	78.702	ENSOGAG00000002979	RBM12B	100	78.803	Otolemur_garnettii
ENSDORG00000024034	-	100	77.030	ENSPTIG00000020071	RBM12B	100	77.671	Panthera_tigris_altaica
ENSDORG00000024034	-	100	79.915	ENSPTRG00000020420	RBM12B	100	80.021	Pan_troglodytes
ENSDORG00000024034	-	100	78.655	ENSPANG00000035535	RBM12B	100	79.424	Papio_anubis
ENSDORG00000024034	-	51	32.617	ENSPKIG00000014851	zgc:153215	98	32.417	Paramormyrops_kingsleyae
ENSDORG00000024034	-	73	50.649	ENSPKIG00000018719	rbm12b	85	50.649	Paramormyrops_kingsleyae
ENSDORG00000024034	-	75	56.463	ENSPSIG00000001348	RBM12B	100	56.463	Pelodiscus_sinensis
ENSDORG00000024034	-	100	69.370	ENSPEMG00000008279	-	100	72.252	Peromyscus_maniculatus_bairdii
ENSDORG00000024034	-	90	65.315	ENSPCIG00000008556	RBM12B	100	65.315	Phascolarctos_cinereus
ENSDORG00000024034	-	62	44.554	ENSPFOG00000020937	rbm12b	86	44.554	Poecilia_formosa
ENSDORG00000024034	-	62	44.554	ENSPLAG00000018782	rbm12b	89	44.554	Poecilia_latipinna
ENSDORG00000024034	-	63	41.379	ENSPMEG00000011418	rbm12b	92	41.379	Poecilia_mexicana
ENSDORG00000024034	-	62	44.554	ENSPREG00000020770	rbm12b	89	44.554	Poecilia_reticulata
ENSDORG00000024034	-	100	78.842	ENSPPYG00000018745	RBM12B	100	75.174	Pongo_abelii
ENSDORG00000024034	-	100	78.205	ENSPCOG00000023546	RBM12B	100	78.739	Propithecus_coquereli
ENSDORG00000024034	-	100	78.519	ENSPVAG00000011803	RBM12B	100	79.446	Pteropus_vampyrus
ENSDORG00000024034	-	63	48.052	ENSPNYG00000016696	rbm12b	91	48.052	Pundamilia_nyererei
ENSDORG00000024034	-	60	48.052	ENSPNAG00000008126	rbm12b	84	48.052	Pygocentrus_nattereri
ENSDORG00000024034	-	90	63.981	ENSRNOG00000055292	LOC679087	100	65.166	Rattus_norvegicus
ENSDORG00000024034	-	100	64.506	ENSRNOG00000016330	Rbm12b	100	65.569	Rattus_norvegicus
ENSDORG00000024034	-	100	79.167	ENSRBIG00000035046	RBM12B	100	79.060	Rhinopithecus_bieti
ENSDORG00000024034	-	100	72.021	ENSRROG00000023660	RBM12B	100	77.054	Rhinopithecus_roxellana
ENSDORG00000024034	-	100	77.955	ENSSBOG00000027592	RBM12B	100	78.701	Saimiri_boliviensis_boliviensis
ENSDORG00000024034	-	90	63.514	ENSSHAG00000015335	RBM12B	100	63.514	Sarcophilus_harrisii
ENSDORG00000024034	-	51	33.202	ENSSFOG00015009427	zgc:153215	99	33.006	Scleropages_formosus
ENSDORG00000024034	-	60	48.052	ENSSFOG00015001584	rbm12b	86	48.052	Scleropages_formosus
ENSDORG00000024034	-	60	49.351	ENSSMAG00000019708	rbm12b	86	49.351	Scophthalmus_maximus
ENSDORG00000024034	-	60	49.351	ENSSDUG00000006856	rbm12b	86	49.351	Seriola_dumerili
ENSDORG00000024034	-	60	49.351	ENSSLDG00000016156	rbm12b	86	49.351	Seriola_lalandi_dorsalis
ENSDORG00000024034	-	78	75.520	ENSSARG00000011845	-	90	75.520	Sorex_araneus
ENSDORG00000024034	-	52	55.513	ENSSPUG00000016954	RBM12B	91	55.340	Sphenodon_punctatus
ENSDORG00000024034	-	60	46.753	ENSSPAG00000006774	rbm12b	86	46.753	Stegastes_partitus
ENSDORG00000024034	-	100	78.093	ENSSSCG00000006110	RBM12B	99	76.498	Sus_scrofa
ENSDORG00000024034	-	54	55.642	ENSTGUG00000011860	RBM12B	100	55.642	Taeniopygia_guttata
ENSDORG00000024034	-	60	50.649	ENSTRUG00000013738	rbm12b	86	50.649	Takifugu_rubripes
ENSDORG00000024034	-	80	78.740	ENSTBEG00000000449	RBM12B	83	78.740	Tupaia_belangeri
ENSDORG00000024034	-	100	77.885	ENSUAMG00000023639	RBM12B	100	78.312	Ursus_americanus
ENSDORG00000024034	-	100	79.318	ENSUMAG00000016008	RBM12B	100	79.318	Ursus_maritimus
ENSDORG00000024034	-	96	87.973	ENSVPAG00000001080	RBM12B	90	87.973	Vicugna_pacos
ENSDORG00000024034	-	100	74.200	ENSVVUG00000002694	RBM12B	100	77.137	Vulpes_vulpes
ENSDORG00000024034	-	72	42.347	ENSXETG00000014694	rbm12b	100	46.653	Xenopus_tropicalis
ENSDORG00000024034	-	61	39.726	ENSXETG00000014696	rbm12b	82	38.492	Xenopus_tropicalis
ENSDORG00000024034	-	51	30.675	ENSXETG00000025920	-	97	30.470	Xenopus_tropicalis
ENSDORG00000024034	-	62	45.545	ENSXMAG00000014213	rbm12b	89	45.545	Xiphophorus_maculatus