EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000024490 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 302 bases
Position: chrKN672363.1:17763237-17763538
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000024666	LSM	PF01423.22	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000025762	-	270	-	ENSDORP00000024666	89 (aa)	-	UPI000BAD17CD

Gene Model

Click here to download ENSDORG00000024490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000024490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000024490	-	100	80.392	ENSDORG00000006894	-	100	80.392
ENSDORG00000024490	-	70	37.500	ENSDORG00000001729	Snrpd2	55	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000024490	-	100	80.392	ENSG00000170860	LSM3	100	80.392	Homo_sapiens
ENSDORG00000024490	-	100	75.490	ENSAPOG00000018947	lsm3	100	75.490	Acanthochromis_polyacanthus
ENSDORG00000024490	-	100	80.392	ENSAMEG00000009405	LSM3	100	80.392	Ailuropoda_melanoleuca
ENSDORG00000024490	-	100	74.510	ENSACIG00000004574	lsm3	71	74.510	Amphilophus_citrinellus
ENSDORG00000024490	-	100	75.490	ENSAOCG00000007658	lsm3	100	75.490	Amphiprion_ocellaris
ENSDORG00000024490	-	100	75.490	ENSAPEG00000018621	lsm3	100	75.490	Amphiprion_percula
ENSDORG00000024490	-	100	75.490	ENSATEG00000005153	lsm3	100	75.490	Anabas_testudineus
ENSDORG00000024490	-	92	80.000	ENSAPLG00000014499	LSM3	100	80.000	Anas_platyrhynchos
ENSDORG00000024490	-	100	79.412	ENSACAG00000013503	LSM3	100	79.412	Anolis_carolinensis
ENSDORG00000024490	-	100	80.392	ENSANAG00000034627	LSM3	100	80.392	Aotus_nancymaae
ENSDORG00000024490	-	100	77.451	ENSANAG00000002903	-	100	77.451	Aotus_nancymaae
ENSDORG00000024490	-	99	74.257	ENSACLG00000001726	-	98	74.257	Astatotilapia_calliptera
ENSDORG00000024490	-	100	77.451	ENSAMXG00000041214	lsm3	100	77.451	Astyanax_mexicanus
ENSDORG00000024490	-	93	80.208	ENSBTAG00000007363	LSM3	100	80.208	Bos_taurus
ENSDORG00000024490	-	85	59.551	WBGene00003077	lsm-3	87	59.551	Caenorhabditis_elegans
ENSDORG00000024490	-	100	79.412	ENSCAFG00000001760	LSM3	100	79.412	Canis_familiaris
ENSDORG00000024490	-	100	72.549	ENSCAFG00020016680	-	100	72.549	Canis_lupus_dingo
ENSDORG00000024490	-	100	79.412	ENSCAFG00020021584	-	100	79.412	Canis_lupus_dingo
ENSDORG00000024490	-	100	79.412	ENSCAFG00020017266	-	100	79.412	Canis_lupus_dingo
ENSDORG00000024490	-	100	71.028	ENSCAFG00020020950	-	100	71.028	Canis_lupus_dingo
ENSDORG00000024490	-	100	78.431	ENSCAFG00020026452	-	100	78.431	Canis_lupus_dingo
ENSDORG00000024490	-	100	80.392	ENSCHIG00000024650	LSM3	100	80.392	Capra_hircus
ENSDORG00000024490	-	99	84.091	ENSTSYG00000028528	-	99	84.091	Carlito_syrichta
ENSDORG00000024490	-	100	79.412	ENSTSYG00000005204	-	100	79.412	Carlito_syrichta
ENSDORG00000024490	-	93	80.208	ENSCAPG00000015760	LSM3	100	80.208	Cavia_aperea
ENSDORG00000024490	-	100	80.392	ENSCPOG00000034071	LSM3	100	80.392	Cavia_porcellus
ENSDORG00000024490	-	100	80.392	ENSCCAG00000019503	-	100	80.392	Cebus_capucinus
ENSDORG00000024490	-	100	80.392	ENSCCAG00000036499	-	100	80.392	Cebus_capucinus
ENSDORG00000024490	-	100	75.532	ENSCCAG00000032763	-	100	75.532	Cebus_capucinus
ENSDORG00000024490	-	99	63.366	ENSCATG00000031630	-	99	63.366	Cercocebus_atys
ENSDORG00000024490	-	100	80.392	ENSCATG00000039421	LSM3	100	80.392	Cercocebus_atys
ENSDORG00000024490	-	100	80.392	ENSCLAG00000015997	LSM3	100	80.392	Chinchilla_lanigera
ENSDORG00000024490	-	100	77.451	ENSCSAG00000019525	-	100	77.451	Chlorocebus_sabaeus
ENSDORG00000024490	-	100	79.412	ENSCPBG00000014531	LSM3	100	79.412	Chrysemys_picta_bellii
ENSDORG00000024490	-	100	64.423	ENSCSAVG00000009542	-	100	64.423	Ciona_savignyi
ENSDORG00000024490	-	100	80.392	ENSCANG00000033944	-	100	80.392	Colobus_angolensis_palliatus
ENSDORG00000024490	-	100	79.412	ENSCANG00000038037	-	100	79.412	Colobus_angolensis_palliatus
ENSDORG00000024490	-	100	76.471	ENSCANG00000018782	-	100	76.471	Colobus_angolensis_palliatus
ENSDORG00000024490	-	98	66.000	ENSCGRG00001011396	-	100	66.000	Cricetulus_griseus_chok1gshd
ENSDORG00000024490	-	92	61.458	ENSCGRG00001008639	-	97	61.458	Cricetulus_griseus_chok1gshd
ENSDORG00000024490	-	100	80.392	ENSCGRG00001017598	Lsm3	100	80.392	Cricetulus_griseus_chok1gshd
ENSDORG00000024490	-	92	65.263	ENSCGRG00000012129	-	100	65.263	Cricetulus_griseus_crigri
ENSDORG00000024490	-	100	80.392	ENSCGRG00000016159	Lsm3	100	80.392	Cricetulus_griseus_crigri
ENSDORG00000024490	-	100	75.490	ENSCSEG00000015071	lsm3	77	75.490	Cynoglossus_semilaevis
ENSDORG00000024490	-	100	74.510	ENSCVAG00000006933	lsm3	100	74.510	Cyprinodon_variegatus
ENSDORG00000024490	-	100	77.451	ENSDARG00000089663	lsm3	100	77.451	Danio_rerio
ENSDORG00000024490	-	100	80.392	ENSDNOG00000030808	LSM3	100	80.392	Dasypus_novemcinctus
ENSDORG00000024490	-	100	60.194	FBgn0051184	LSm3	100	60.194	Drosophila_melanogaster
ENSDORG00000024490	-	100	80.392	ENSETEG00000016207	LSM3	100	80.392	Echinops_telfairi
ENSDORG00000024490	-	100	72.549	ENSEBUG00000004943	lsm3	100	72.549	Eptatretus_burgeri
ENSDORG00000024490	-	100	80.392	ENSEASG00005015443	LSM3	100	80.392	Equus_asinus_asinus
ENSDORG00000024490	-	100	80.392	ENSECAG00000007803	LSM3	100	80.392	Equus_caballus
ENSDORG00000024490	-	100	76.471	ENSELUG00000018922	lsm3	100	76.471	Esox_lucius
ENSDORG00000024490	-	100	60.784	ENSFCAG00000044344	-	100	60.784	Felis_catus
ENSDORG00000024490	-	100	80.392	ENSFCAG00000038453	LSM3	100	80.392	Felis_catus
ENSDORG00000024490	-	100	79.412	ENSFALG00000012644	LSM3	100	79.412	Ficedula_albicollis
ENSDORG00000024490	-	100	80.392	ENSFDAG00000011470	LSM3	100	80.392	Fukomys_damarensis
ENSDORG00000024490	-	100	75.490	ENSFHEG00000000876	lsm3	100	75.490	Fundulus_heteroclitus
ENSDORG00000024490	-	92	76.842	ENSGMOG00000011024	lsm3	100	76.842	Gadus_morhua
ENSDORG00000024490	-	100	75.490	ENSGAFG00000013965	lsm3	100	75.490	Gambusia_affinis
ENSDORG00000024490	-	100	75.490	ENSGACG00000003488	lsm3	100	75.490	Gasterosteus_aculeatus
ENSDORG00000024490	-	100	79.412	ENSGAGG00000025707	LSM3	100	79.412	Gopherus_agassizii
ENSDORG00000024490	-	100	80.392	ENSGGOG00000010006	LSM3	100	80.392	Gorilla_gorilla
ENSDORG00000024490	-	100	75.490	ENSHBUG00000022399	lsm3	100	75.490	Haplochromis_burtoni
ENSDORG00000024490	-	100	80.392	ENSHGLG00000000651	LSM3	100	80.392	Heterocephalus_glaber_female
ENSDORG00000024490	-	100	86.517	ENSHGLG00000015564	-	100	86.517	Heterocephalus_glaber_female
ENSDORG00000024490	-	100	86.517	ENSHGLG00100010658	-	100	86.517	Heterocephalus_glaber_male
ENSDORG00000024490	-	100	80.392	ENSHGLG00100011343	LSM3	100	80.392	Heterocephalus_glaber_male
ENSDORG00000024490	-	100	74.510	ENSHCOG00000013481	lsm3	100	74.510	Hippocampus_comes
ENSDORG00000024490	-	100	77.451	ENSIPUG00000009207	lsm3	100	77.451	Ictalurus_punctatus
ENSDORG00000024490	-	100	80.392	ENSSTOG00000006842	LSM3	100	80.392	Ictidomys_tridecemlineatus
ENSDORG00000024490	-	99	63.265	ENSJJAG00000018311	-	100	63.265	Jaculus_jaculus
ENSDORG00000024490	-	100	80.392	ENSJJAG00000017351	Lsm3	100	80.392	Jaculus_jaculus
ENSDORG00000024490	-	100	72.549	ENSJJAG00000012797	-	100	72.549	Jaculus_jaculus
ENSDORG00000024490	-	100	74.510	ENSKMAG00000015182	lsm3	100	74.510	Kryptolebias_marmoratus
ENSDORG00000024490	-	96	74.490	ENSLBEG00000021292	lsm3	100	74.490	Labrus_bergylta
ENSDORG00000024490	-	100	77.451	ENSLOCG00000013560	lsm3	100	77.451	Lepisosteus_oculatus
ENSDORG00000024490	-	100	79.612	ENSLAFG00000023308	LSM3	100	79.612	Loxodonta_africana
ENSDORG00000024490	-	100	80.392	ENSMFAG00000003185	LSM3	100	80.392	Macaca_fascicularis
ENSDORG00000024490	-	100	80.392	ENSMMUG00000023126	LSM3	100	80.392	Macaca_mulatta
ENSDORG00000024490	-	94	61.856	ENSMMUG00000002294	-	94	61.856	Macaca_mulatta
ENSDORG00000024490	-	100	77.660	ENSMMUG00000043596	-	100	77.660	Macaca_mulatta
ENSDORG00000024490	-	100	80.392	ENSMNEG00000043632	LSM3	100	80.392	Macaca_nemestrina
ENSDORG00000024490	-	99	64.356	ENSMNEG00000037686	-	99	64.356	Macaca_nemestrina
ENSDORG00000024490	-	100	80.392	ENSMLEG00000036162	LSM3	100	80.392	Mandrillus_leucophaeus
ENSDORG00000024490	-	100	75.490	ENSMAMG00000012807	lsm3	100	75.490	Mastacembelus_armatus
ENSDORG00000024490	-	100	75.490	ENSMZEG00005016682	lsm3	73	75.490	Maylandia_zebra
ENSDORG00000024490	-	93	80.208	ENSMGAG00000007776	LSM3	100	80.208	Meleagris_gallopavo
ENSDORG00000024490	-	100	81.915	ENSMICG00000027821	-	100	81.915	Microcebus_murinus
ENSDORG00000024490	-	100	79.412	ENSMICG00000032361	-	100	79.412	Microcebus_murinus
ENSDORG00000024490	-	100	80.392	ENSMOCG00000014269	Lsm3	100	80.392	Microtus_ochrogaster
ENSDORG00000024490	-	100	74.510	ENSMMOG00000020715	lsm3	100	74.510	Mola_mola
ENSDORG00000024490	-	100	79.412	ENSMODG00000007275	LSM3	100	79.412	Monodelphis_domestica
ENSDORG00000024490	-	100	75.490	ENSMALG00000006485	lsm3	100	75.490	Monopterus_albus
ENSDORG00000024490	-	100	80.392	ENSMUSG00000034192	Lsm3	100	80.392	Mus_musculus
ENSDORG00000024490	-	100	80.392	MGP_PahariEiJ_G0022402	Lsm3	100	80.392	Mus_pahari
ENSDORG00000024490	-	100	80.392	MGP_SPRETEiJ_G0029681	Lsm3	100	80.392	Mus_spretus
ENSDORG00000024490	-	97	69.697	ENSMPUG00000019120	-	97	69.697	Mustela_putorius_furo
ENSDORG00000024490	-	74	73.418	ENSMPUG00000017256	-	94	73.418	Mustela_putorius_furo
ENSDORG00000024490	-	100	80.392	ENSMLUG00000010677	LSM3	100	80.392	Myotis_lucifugus
ENSDORG00000024490	-	100	75.490	ENSMLUG00000024700	-	100	75.490	Myotis_lucifugus
ENSDORG00000024490	-	100	77.528	ENSNGAG00000013716	-	100	77.528	Nannospalax_galili
ENSDORG00000024490	-	100	80.392	ENSNGAG00000022450	Lsm3	100	80.392	Nannospalax_galili
ENSDORG00000024490	-	84	69.318	ENSNGAG00000010207	-	92	69.318	Nannospalax_galili
ENSDORG00000024490	-	100	75.490	ENSNBRG00000014318	lsm3	100	75.490	Neolamprologus_brichardi
ENSDORG00000024490	-	100	80.392	ENSNLEG00000005079	LSM3	100	80.392	Nomascus_leucogenys
ENSDORG00000024490	-	100	84.211	ENSNLEG00000030229	-	100	84.211	Nomascus_leucogenys
ENSDORG00000024490	-	100	80.392	ENSODEG00000001726	LSM3	100	80.392	Octodon_degus
ENSDORG00000024490	-	100	78.431	ENSODEG00000019158	-	100	78.431	Octodon_degus
ENSDORG00000024490	-	100	79.412	ENSODEG00000019740	-	100	79.412	Octodon_degus
ENSDORG00000024490	-	100	73.529	ENSODEG00000019403	-	100	73.529	Octodon_degus
ENSDORG00000024490	-	100	75.490	ENSONIG00000000370	lsm3	100	75.490	Oreochromis_niloticus
ENSDORG00000024490	-	100	75.490	ENSONIG00000021369	-	100	75.490	Oreochromis_niloticus
ENSDORG00000024490	-	100	79.412	ENSOANG00000012273	LSM3	100	79.412	Ornithorhynchus_anatinus
ENSDORG00000024490	-	100	75.490	ENSOCUG00000011088	-	100	75.490	Oryctolagus_cuniculus
ENSDORG00000024490	-	100	80.392	ENSOCUG00000027653	-	100	80.392	Oryctolagus_cuniculus
ENSDORG00000024490	-	100	73.529	ENSORLG00000025900	lsm3	100	73.529	Oryzias_latipes
ENSDORG00000024490	-	100	73.529	ENSORLG00020007125	lsm3	100	73.529	Oryzias_latipes_hni
ENSDORG00000024490	-	100	73.529	ENSORLG00015002944	lsm3	100	73.529	Oryzias_latipes_hsok
ENSDORG00000024490	-	100	73.529	ENSOMEG00000001915	lsm3	100	73.529	Oryzias_melastigma
ENSDORG00000024490	-	100	80.392	ENSOGAG00000007659	-	100	80.392	Otolemur_garnettii
ENSDORG00000024490	-	96	78.571	ENSOGAG00000028858	-	100	78.571	Otolemur_garnettii
ENSDORG00000024490	-	100	75.490	ENSOGAG00000033051	-	100	75.490	Otolemur_garnettii
ENSDORG00000024490	-	100	79.612	ENSOARG00000000600	LSM3	100	79.612	Ovis_aries
ENSDORG00000024490	-	100	80.392	ENSPPAG00000034074	LSM3	100	80.392	Pan_paniscus
ENSDORG00000024490	-	100	79.412	ENSPPRG00000020953	-	100	79.412	Panthera_pardus
ENSDORG00000024490	-	99	74.257	ENSPPRG00000010610	-	89	74.257	Panthera_pardus
ENSDORG00000024490	-	100	80.392	ENSPPRG00000012912	-	100	80.392	Panthera_pardus
ENSDORG00000024490	-	100	80.392	ENSPTIG00000013072	-	100	80.392	Panthera_tigris_altaica
ENSDORG00000024490	-	100	80.392	ENSPTIG00000003463	-	100	80.392	Panthera_tigris_altaica
ENSDORG00000024490	-	100	80.392	ENSPTRG00000014650	LSM3	100	80.392	Pan_troglodytes
ENSDORG00000024490	-	100	80.392	ENSPANG00000009378	LSM3	100	80.392	Papio_anubis
ENSDORG00000024490	-	100	75.532	ENSPANG00000032192	-	100	75.532	Papio_anubis
ENSDORG00000024490	-	100	78.431	ENSPKIG00000008037	lsm3	91	78.431	Paramormyrops_kingsleyae
ENSDORG00000024490	-	100	79.412	ENSPSIG00000015720	LSM3	100	79.412	Pelodiscus_sinensis
ENSDORG00000024490	-	100	72.549	ENSPMGG00000012103	lsm3	100	72.549	Periophthalmus_magnuspinnatus
ENSDORG00000024490	-	100	80.392	ENSPEMG00000015797	Lsm3	100	80.392	Peromyscus_maniculatus_bairdii
ENSDORG00000024490	-	100	83.871	ENSPEMG00000020213	-	100	83.871	Peromyscus_maniculatus_bairdii
ENSDORG00000024490	-	100	75.490	ENSPFOG00000008372	lsm3	100	75.490	Poecilia_formosa
ENSDORG00000024490	-	100	75.490	ENSPLAG00000000563	lsm3	100	75.490	Poecilia_latipinna
ENSDORG00000024490	-	100	75.490	ENSPMEG00000022052	lsm3	100	75.490	Poecilia_mexicana
ENSDORG00000024490	-	100	75.490	ENSPREG00000022485	lsm3	100	75.490	Poecilia_reticulata
ENSDORG00000024490	-	100	80.392	ENSPPYG00000013402	LSM3	100	80.392	Pongo_abelii
ENSDORG00000024490	-	100	80.392	ENSPCAG00000017077	LSM3	100	80.392	Procavia_capensis
ENSDORG00000024490	-	93	60.417	ENSPCOG00000014435	-	98	60.417	Propithecus_coquereli
ENSDORG00000024490	-	100	79.412	ENSPCOG00000016217	-	100	79.412	Propithecus_coquereli
ENSDORG00000024490	-	100	80.392	ENSPVAG00000016795	LSM3	100	80.392	Pteropus_vampyrus
ENSDORG00000024490	-	100	75.490	ENSPNYG00000009552	lsm3	73	75.490	Pundamilia_nyererei
ENSDORG00000024490	-	100	77.451	ENSPNAG00000023467	lsm3	100	77.451	Pygocentrus_nattereri
ENSDORG00000024490	-	100	80.392	ENSRNOG00000008733	Lsm3	100	80.392	Rattus_norvegicus
ENSDORG00000024490	-	100	67.647	ENSRBIG00000043783	-	100	67.647	Rhinopithecus_bieti
ENSDORG00000024490	-	100	80.392	ENSRBIG00000034399	LSM3	100	80.392	Rhinopithecus_bieti
ENSDORG00000024490	-	100	76.596	ENSRROG00000044056	-	100	76.596	Rhinopithecus_roxellana
ENSDORG00000024490	-	100	80.392	ENSRROG00000033276	-	100	80.392	Rhinopithecus_roxellana
ENSDORG00000024490	-	100	84.043	ENSRROG00000044047	-	100	84.043	Rhinopithecus_roxellana
ENSDORG00000024490	-	100	68.627	ENSRROG00000039868	-	100	68.627	Rhinopithecus_roxellana
ENSDORG00000024490	-	100	80.392	ENSSBOG00000024310	LSM3	100	80.392	Saimiri_boliviensis_boliviensis
ENSDORG00000024490	-	100	77.451	ENSSFOG00015007071	lsm3	100	77.451	Scleropages_formosus
ENSDORG00000024490	-	100	75.490	ENSSMAG00000001818	lsm3	100	75.490	Scophthalmus_maximus
ENSDORG00000024490	-	100	75.490	ENSSDUG00000006040	lsm3	100	75.490	Seriola_dumerili
ENSDORG00000024490	-	100	75.490	ENSSLDG00000006399	lsm3	100	75.490	Seriola_lalandi_dorsalis
ENSDORG00000024490	-	65	91.379	ENSSARG00000005275	-	100	91.379	Sorex_araneus
ENSDORG00000024490	-	100	72.549	ENSSPUG00000005394	LSM3	100	72.549	Sphenodon_punctatus
ENSDORG00000024490	-	92	80.000	ENSSPUG00000017047	-	99	80.000	Sphenodon_punctatus
ENSDORG00000024490	-	100	66.667	ENSSPAG00000000934	lsm3	100	66.667	Stegastes_partitus
ENSDORG00000024490	-	94	62.887	ENSSSCG00000023718	-	99	62.887	Sus_scrofa
ENSDORG00000024490	-	100	80.392	ENSSSCG00000011601	LSM3	100	80.392	Sus_scrofa
ENSDORG00000024490	-	100	79.412	ENSTGUG00000008327	LSM3	100	79.412	Taeniopygia_guttata
ENSDORG00000024490	-	100	74.510	ENSTRUG00000023175	lsm3	100	74.510	Takifugu_rubripes
ENSDORG00000024490	-	100	74.510	ENSTNIG00000005589	lsm3	100	74.510	Tetraodon_nigroviridis
ENSDORG00000024490	-	100	71.569	ENSTBEG00000001050	-	99	71.569	Tupaia_belangeri
ENSDORG00000024490	-	100	80.392	ENSTTRG00000011197	LSM3	100	80.392	Tursiops_truncatus
ENSDORG00000024490	-	100	80.392	ENSUAMG00000017250	-	100	80.392	Ursus_americanus
ENSDORG00000024490	-	100	80.392	ENSUMAG00000015905	LSM3	100	80.392	Ursus_maritimus
ENSDORG00000024490	-	92	80.000	ENSVPAG00000010709	LSM3	100	80.000	Vicugna_pacos
ENSDORG00000024490	-	100	73.529	ENSVVUG00000024228	-	100	73.529	Vulpes_vulpes
ENSDORG00000024490	-	100	75.490	ENSVVUG00000005684	-	100	75.490	Vulpes_vulpes
ENSDORG00000024490	-	100	75.490	ENSVVUG00000029294	-	100	75.490	Vulpes_vulpes
ENSDORG00000024490	-	100	78.431	ENSVVUG00000006481	-	100	78.431	Vulpes_vulpes
ENSDORG00000024490	-	100	77.451	ENSVVUG00000007332	-	91	77.451	Vulpes_vulpes
ENSDORG00000024490	-	100	78.431	ENSXETG00000011534	lsm3	100	78.431	Xenopus_tropicalis
ENSDORG00000024490	-	100	75.490	ENSXCOG00000017432	LSM3	100	75.490	Xiphophorus_couchianus
ENSDORG00000024490	-	100	75.490	ENSXMAG00000009151	lsm3	100	75.490	Xiphophorus_maculatus