EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000024958 (Gene tree)
Gene ID: 105989904
Gene Symbol: -
Alias: -
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 37619 bases
Position: chrKN672406.1:3973337-4010955
Accession: 105989904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000022799	MMR_HSR1	PF01926.23	7.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000027711	-	2288	XM_013022169	ENSDORP00000022799	215 (aa)	XP_012877623	A0A1S3FM25

Gene Model

Click here to download ENSDORG00000024958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000024958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000024958	-	89	40.104	ENSDORG00000001591	Rab13	95	40.104
ENSDORG00000024958	-	90	33.333	ENSDORG00000009342	Rab9	97	33.333
ENSDORG00000024958	-	74	40.881	ENSDORG00000025986	Rab15	75	40.881
ENSDORG00000024958	-	79	44.068	ENSDORG00000028596	-	85	44.068
ENSDORG00000024958	-	100	87.963	ENSDORG00000006819	Rab5c	100	87.963
ENSDORG00000024958	-	75	41.615	ENSDORG00000025014	Rab2a	76	41.615
ENSDORG00000024958	-	91	43.204	ENSDORG00000006304	Rab11b	94	43.204
ENSDORG00000024958	-	72	36.875	ENSDORG00000023607	Rab42	74	36.875
ENSDORG00000024958	-	95	42.718	ENSDORG00000026441	Rab6b	98	42.718
ENSDORG00000024958	-	100	81.860	ENSDORG00000025063	Rab5b	100	81.860
ENSDORG00000024958	-	90	42.424	ENSDORG00000002922	Rab25	93	42.424
ENSDORG00000024958	-	83	31.667	ENSDORG00000025267	Nras	94	31.667
ENSDORG00000024958	-	81	44.253	ENSDORG00000015066	-	86	44.253
ENSDORG00000024958	-	55	30.159	ENSDORG00000028437	Arl4a	60	30.159
ENSDORG00000024958	-	75	41.566	ENSDORG00000024129	Rab33a	70	41.566
ENSDORG00000024958	-	78	42.515	ENSDORG00000012048	Rab2b	79	44.079
ENSDORG00000024958	-	79	36.686	ENSDORG00000028344	Rab23	71	36.686
ENSDORG00000024958	-	95	41.546	ENSDORG00000027784	Rab6a	98	41.546
ENSDORG00000024958	-	81	40.782	ENSDORG00000027671	-	86	40.782
ENSDORG00000024958	-	75	36.585	ENSDORG00000029496	Rab39b	77	36.585
ENSDORG00000024958	-	81	43.678	ENSDORG00000010504	-	86	43.678
ENSDORG00000024958	-	79	43.275	ENSDORG00000029360	-	79	43.275
ENSDORG00000024958	-	81	37.989	ENSDORG00000008920	Rab12	79	37.989
ENSDORG00000024958	-	90	45.918	ENSDORG00000002511	Rab1b	96	45.918
ENSDORG00000024958	-	90	37.811	ENSDORG00000023618	Rab33b	86	37.811
ENSDORG00000024958	-	90	37.436	ENSDORG00000000972	Rab35	96	37.436
ENSDORG00000024958	-	90	43.814	ENSDORG00000028628	-	95	43.814
ENSDORG00000024958	-	80	33.702	ENSDORG00000011469	-	94	33.702
ENSDORG00000024958	-	82	31.667	ENSDORG00000028079	Hras	94	31.667
ENSDORG00000024958	-	71	34.641	ENSDORG00000000003	Rabl2	67	34.641
ENSDORG00000024958	-	89	38.614	ENSDORG00000023851	Rab14	94	38.614
ENSDORG00000024958	-	73	31.875	ENSDORG00000011452	Rab34	62	31.875
ENSDORG00000024958	-	56	32.258	ENSDORG00000023904	Arl8b	63	32.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000024958	-	100	99.070	ENSG00000144566	RAB5A	100	99.070	Homo_sapiens
ENSDORG00000024958	-	100	92.130	ENSAPOG00000021391	rab5aa	100	92.130	Acanthochromis_polyacanthus
ENSDORG00000024958	-	100	100.000	ENSAMEG00000000954	RAB5A	100	100.000	Ailuropoda_melanoleuca
ENSDORG00000024958	-	100	92.593	ENSACIG00000019251	rab5aa	100	92.593	Amphilophus_citrinellus
ENSDORG00000024958	-	100	93.056	ENSAOCG00000000090	rab5aa	100	93.056	Amphiprion_ocellaris
ENSDORG00000024958	-	100	93.056	ENSAPEG00000013376	rab5aa	100	93.056	Amphiprion_percula
ENSDORG00000024958	-	100	92.593	ENSATEG00000014748	rab5aa	100	92.593	Anabas_testudineus
ENSDORG00000024958	-	100	96.279	ENSACAG00000000017	RAB5A	100	96.279	Anolis_carolinensis
ENSDORG00000024958	-	100	100.000	ENSANAG00000025120	RAB5A	100	100.000	Aotus_nancymaae
ENSDORG00000024958	-	100	93.056	ENSACLG00000018066	rab5aa	100	93.056	Astatotilapia_calliptera
ENSDORG00000024958	-	100	89.862	ENSAMXG00000035919	rab5ab	100	89.862	Astyanax_mexicanus
ENSDORG00000024958	-	100	92.130	ENSAMXG00000036179	rab5aa	100	92.130	Astyanax_mexicanus
ENSDORG00000024958	-	100	99.535	ENSBTAG00000046385	RAB5A	100	99.535	Bos_taurus
ENSDORG00000024958	-	100	100.000	ENSCJAG00000048394	RAB5A	100	100.000	Callithrix_jacchus
ENSDORG00000024958	-	100	100.000	ENSCAFG00000005814	RAB5A	100	100.000	Canis_familiaris
ENSDORG00000024958	-	100	100.000	ENSCAFG00020027287	RAB5A	100	100.000	Canis_lupus_dingo
ENSDORG00000024958	-	100	99.070	ENSCHIG00000025419	-	100	99.070	Capra_hircus
ENSDORG00000024958	-	100	93.488	ENSTSYG00000030238	-	100	93.488	Carlito_syrichta
ENSDORG00000024958	-	100	99.535	ENSTSYG00000007642	-	100	99.535	Carlito_syrichta
ENSDORG00000024958	-	100	100.000	ENSCCAG00000022405	RAB5A	100	100.000	Cebus_capucinus
ENSDORG00000024958	-	100	100.000	ENSCATG00000033588	-	100	100.000	Cercocebus_atys
ENSDORG00000024958	-	100	99.070	ENSCLAG00000006053	-	100	99.070	Chinchilla_lanigera
ENSDORG00000024958	-	100	100.000	ENSCSAG00000009831	RAB5A	100	100.000	Chlorocebus_sabaeus
ENSDORG00000024958	-	100	95.814	ENSCPBG00000022559	RAB5A	100	95.814	Chrysemys_picta_bellii
ENSDORG00000024958	-	100	100.000	ENSCANG00000043514	RAB5A	100	100.000	Colobus_angolensis_palliatus
ENSDORG00000024958	-	100	98.140	ENSCGRG00001020018	-	100	98.140	Cricetulus_griseus_chok1gshd
ENSDORG00000024958	-	100	98.140	ENSCGRG00000002786	-	100	98.140	Cricetulus_griseus_crigri
ENSDORG00000024958	-	99	93.023	ENSCVAG00000008239	rab5aa	99	93.023	Cyprinodon_variegatus
ENSDORG00000024958	-	100	93.056	ENSDARG00000018602	rab5aa	100	93.056	Danio_rerio
ENSDORG00000024958	-	99	92.093	ENSDARG00000007257	rab5ab	99	92.093	Danio_rerio
ENSDORG00000024958	-	100	99.535	ENSDNOG00000038467	RAB5A	100	99.535	Dasypus_novemcinctus
ENSDORG00000024958	-	100	99.535	ENSEASG00005005818	RAB5A	100	99.535	Equus_asinus_asinus
ENSDORG00000024958	-	100	100.000	ENSECAG00000019062	RAB5A	100	100.000	Equus_caballus
ENSDORG00000024958	-	100	99.070	ENSEEUG00000009044	RAB5A	100	99.070	Erinaceus_europaeus
ENSDORG00000024958	-	99	92.093	ENSELUG00000013436	rab5ab	99	92.093	Esox_lucius
ENSDORG00000024958	-	100	93.519	ENSELUG00000006462	rab5aa	100	93.519	Esox_lucius
ENSDORG00000024958	-	100	100.000	ENSFCAG00000039795	-	100	100.000	Felis_catus
ENSDORG00000024958	-	100	96.744	ENSFALG00000009239	RAB5A	100	96.744	Ficedula_albicollis
ENSDORG00000024958	-	100	99.070	ENSFDAG00000005631	-	100	99.070	Fukomys_damarensis
ENSDORG00000024958	-	99	93.023	ENSFHEG00000014070	rab5aa	99	93.023	Fundulus_heteroclitus
ENSDORG00000024958	-	99	91.163	ENSGMOG00000002868	rab5aa	99	91.163	Gadus_morhua
ENSDORG00000024958	-	84	93.923	ENSGMOG00000007127	RAB5A	99	93.923	Gadus_morhua
ENSDORG00000024958	-	100	96.744	ENSGALG00000011272	RAB5A	100	96.744	Gallus_gallus
ENSDORG00000024958	-	99	93.023	ENSGAFG00000011619	rab5aa	99	93.023	Gambusia_affinis
ENSDORG00000024958	-	100	91.204	ENSGACG00000004997	rab5aa	100	91.204	Gasterosteus_aculeatus
ENSDORG00000024958	-	100	96.279	ENSGAGG00000005319	RAB5A	100	96.279	Gopherus_agassizii
ENSDORG00000024958	-	100	99.070	ENSGGOG00000015981	RAB5A	100	99.070	Gorilla_gorilla
ENSDORG00000024958	-	100	93.056	ENSHBUG00000003752	rab5aa	100	93.056	Haplochromis_burtoni
ENSDORG00000024958	-	97	100.000	ENSHGLG00000006357	-	100	100.000	Heterocephalus_glaber_female
ENSDORG00000024958	-	99	91.121	ENSHGLG00000017749	-	97	91.121	Heterocephalus_glaber_female
ENSDORG00000024958	-	99	91.121	ENSHGLG00100008816	-	97	91.121	Heterocephalus_glaber_male
ENSDORG00000024958	-	100	100.000	ENSHGLG00100007553	RAB5A	100	100.000	Heterocephalus_glaber_male
ENSDORG00000024958	-	100	89.862	ENSIPUG00000023392	rab5a	100	89.862	Ictalurus_punctatus
ENSDORG00000024958	-	100	99.535	ENSSTOG00000026229	RAB5A	100	99.535	Ictidomys_tridecemlineatus
ENSDORG00000024958	-	100	96.744	ENSJJAG00000020190	Rab5a	100	96.744	Jaculus_jaculus
ENSDORG00000024958	-	100	92.593	ENSKMAG00000005111	rab5aa	100	92.593	Kryptolebias_marmoratus
ENSDORG00000024958	-	98	92.857	ENSLBEG00000002516	rab5aa	93	92.857	Labrus_bergylta
ENSDORG00000024958	-	100	93.981	ENSLACG00000004663	RAB5A	100	93.981	Latimeria_chalumnae
ENSDORG00000024958	-	100	93.519	ENSLOCG00000006591	rab5ab	100	93.519	Lepisosteus_oculatus
ENSDORG00000024958	-	100	99.535	ENSLAFG00000008321	RAB5A	100	99.535	Loxodonta_africana
ENSDORG00000024958	-	100	100.000	ENSMFAG00000002326	RAB5A	100	100.000	Macaca_fascicularis
ENSDORG00000024958	-	69	95.302	ENSMMUG00000032398	-	87	95.302	Macaca_mulatta
ENSDORG00000024958	-	83	99.441	ENSMMUG00000006992	RAB5A	91	99.441	Macaca_mulatta
ENSDORG00000024958	-	100	100.000	ENSMNEG00000039149	-	100	100.000	Macaca_nemestrina
ENSDORG00000024958	-	100	100.000	ENSMLEG00000028944	RAB5A	100	100.000	Mandrillus_leucophaeus
ENSDORG00000024958	-	100	93.056	ENSMAMG00000012573	rab5aa	100	93.056	Mastacembelus_armatus
ENSDORG00000024958	-	100	93.056	ENSMZEG00005005205	rab5aa	100	93.056	Maylandia_zebra
ENSDORG00000024958	-	100	97.209	ENSMGAG00000010961	RAB5A	100	97.209	Meleagris_gallopavo
ENSDORG00000024958	-	100	99.070	ENSMAUG00000011242	-	100	99.070	Mesocricetus_auratus
ENSDORG00000024958	-	100	100.000	ENSMICG00000049130	RAB5A	100	100.000	Microcebus_murinus
ENSDORG00000024958	-	100	98.605	ENSMOCG00000009706	Rab5a	100	98.605	Microtus_ochrogaster
ENSDORG00000024958	-	100	91.667	ENSMMOG00000019135	rab5aa	100	91.667	Mola_mola
ENSDORG00000024958	-	100	98.605	ENSMODG00000014793	RAB5A	100	98.605	Monodelphis_domestica
ENSDORG00000024958	-	100	91.667	ENSMALG00000014929	rab5aa	100	91.667	Monopterus_albus
ENSDORG00000024958	-	100	99.070	MGP_CAROLIEiJ_G0021741	Rab5a	100	99.070	Mus_caroli
ENSDORG00000024958	-	100	99.070	ENSMUSG00000017831	Rab5a	100	99.070	Mus_musculus
ENSDORG00000024958	-	87	96.237	MGP_PahariEiJ_G0020730	Rab5a	99	96.237	Mus_pahari
ENSDORG00000024958	-	100	100.000	ENSMPUG00000013147	RAB5A	100	100.000	Mustela_putorius_furo
ENSDORG00000024958	-	100	100.000	ENSMLUG00000011716	RAB5A	100	100.000	Myotis_lucifugus
ENSDORG00000024958	-	100	99.070	ENSNGAG00000021245	-	100	99.070	Nannospalax_galili
ENSDORG00000024958	-	100	93.056	ENSNBRG00000011763	rab5aa	100	93.056	Neolamprologus_brichardi
ENSDORG00000024958	-	100	99.535	ENSNLEG00000003434	RAB5A	100	99.535	Nomascus_leucogenys
ENSDORG00000024958	-	82	99.435	ENSOPRG00000011278	RAB5A	100	99.435	Ochotona_princeps
ENSDORG00000024958	-	68	100.000	ENSODEG00000000290	-	99	100.000	Octodon_degus
ENSDORG00000024958	-	87	89.474	ENSODEG00000019065	-	100	89.474	Octodon_degus
ENSDORG00000024958	-	100	93.056	ENSONIG00000002425	rab5aa	100	93.056	Oreochromis_niloticus
ENSDORG00000024958	-	99	97.170	ENSOANG00000004989	RAB5A	97	97.170	Ornithorhynchus_anatinus
ENSDORG00000024958	-	100	99.535	ENSOCUG00000012200	RAB5A	100	99.535	Oryctolagus_cuniculus
ENSDORG00000024958	-	100	92.130	ENSORLG00000012261	rab5aa	100	92.130	Oryzias_latipes
ENSDORG00000024958	-	100	92.130	ENSORLG00020020922	rab5aa	100	92.130	Oryzias_latipes_hni
ENSDORG00000024958	-	100	90.741	ENSORLG00015017737	rab5ab	100	90.741	Oryzias_latipes_hsok
ENSDORG00000024958	-	100	92.130	ENSORLG00015012854	rab5aa	100	92.130	Oryzias_latipes_hsok
ENSDORG00000024958	-	100	93.056	ENSOMEG00000010692	rab5aa	100	93.056	Oryzias_melastigma
ENSDORG00000024958	-	100	99.070	ENSOARG00000015722	RAB5A	100	99.070	Ovis_aries
ENSDORG00000024958	-	100	98.611	ENSPPAG00000041763	RAB5A	100	98.611	Pan_paniscus
ENSDORG00000024958	-	100	100.000	ENSPPRG00000001655	-	100	100.000	Panthera_pardus
ENSDORG00000024958	-	100	100.000	ENSPTIG00000021685	RAB5A	100	100.000	Panthera_tigris_altaica
ENSDORG00000024958	-	100	98.611	ENSPTRG00000014682	RAB5A	100	98.611	Pan_troglodytes
ENSDORG00000024958	-	100	100.000	ENSPANG00000001328	RAB5A	100	100.000	Papio_anubis
ENSDORG00000024958	-	100	93.056	ENSPKIG00000009578	rab5ab	100	93.056	Paramormyrops_kingsleyae
ENSDORG00000024958	-	100	89.352	ENSPKIG00000010291	RAB5A	100	89.352	Paramormyrops_kingsleyae
ENSDORG00000024958	-	100	96.744	ENSPSIG00000007157	RAB5A	100	96.744	Pelodiscus_sinensis
ENSDORG00000024958	-	100	92.130	ENSPMGG00000001915	rab5aa	100	92.130	Periophthalmus_magnuspinnatus
ENSDORG00000024958	-	100	99.535	ENSPCIG00000018321	RAB5A	100	99.535	Phascolarctos_cinereus
ENSDORG00000024958	-	99	93.488	ENSPFOG00000011263	rab5aa	99	93.488	Poecilia_formosa
ENSDORG00000024958	-	99	93.488	ENSPLAG00000017838	rab5aa	99	93.488	Poecilia_latipinna
ENSDORG00000024958	-	99	93.488	ENSPMEG00000007238	rab5aa	99	93.488	Poecilia_mexicana
ENSDORG00000024958	-	100	99.535	ENSPPYG00000014074	RAB5A	100	99.535	Pongo_abelii
ENSDORG00000024958	-	100	100.000	ENSPCOG00000013289	RAB5A	100	100.000	Propithecus_coquereli
ENSDORG00000024958	-	100	99.535	ENSPVAG00000006730	RAB5A	100	99.535	Pteropus_vampyrus
ENSDORG00000024958	-	100	93.056	ENSPNYG00000010612	rab5aa	100	93.056	Pundamilia_nyererei
ENSDORG00000024958	-	100	89.862	ENSPNAG00000009496	rab5ab	100	89.862	Pygocentrus_nattereri
ENSDORG00000024958	-	100	92.130	ENSPNAG00000023223	rab5aa	100	92.130	Pygocentrus_nattereri
ENSDORG00000024958	-	100	100.000	ENSRBIG00000036122	RAB5A	100	100.000	Rhinopithecus_bieti
ENSDORG00000024958	-	100	100.000	ENSRROG00000037687	RAB5A	100	100.000	Rhinopithecus_roxellana
ENSDORG00000024958	-	100	99.074	ENSSHAG00000006787	RAB5A	100	99.074	Sarcophilus_harrisii
ENSDORG00000024958	-	100	93.056	ENSSFOG00015014517	rab5a	100	93.056	Scleropages_formosus
ENSDORG00000024958	-	98	91.943	ENSSFOG00015021115	-	98	91.943	Scleropages_formosus
ENSDORG00000024958	-	100	92.593	ENSSMAG00000009229	rab5aa	100	92.593	Scophthalmus_maximus
ENSDORG00000024958	-	100	93.056	ENSSDUG00000009835	rab5aa	100	93.056	Seriola_dumerili
ENSDORG00000024958	-	100	93.056	ENSSLDG00000011069	rab5aa	100	93.056	Seriola_lalandi_dorsalis
ENSDORG00000024958	-	87	98.396	ENSSPUG00000001173	RAB5A	96	98.396	Sphenodon_punctatus
ENSDORG00000024958	-	100	92.130	ENSSPAG00000015678	rab5aa	100	92.130	Stegastes_partitus
ENSDORG00000024958	-	100	98.605	ENSSSCG00000037653	RAB5A	100	98.605	Sus_scrofa
ENSDORG00000024958	-	100	96.279	ENSTGUG00000003236	RAB5A	100	96.279	Taeniopygia_guttata
ENSDORG00000024958	-	99	91.163	ENSTRUG00000024368	rab5aa	99	91.163	Takifugu_rubripes
ENSDORG00000024958	-	100	91.204	ENSTNIG00000009196	rab5aa	100	91.204	Tetraodon_nigroviridis
ENSDORG00000024958	-	100	100.000	ENSTTRG00000001374	RAB5A	100	100.000	Tursiops_truncatus
ENSDORG00000024958	-	100	93.886	ENSUAMG00000027471	RAB5A	99	97.814	Ursus_americanus
ENSDORG00000024958	-	100	100.000	ENSUMAG00000018295	RAB5A	100	100.000	Ursus_maritimus
ENSDORG00000024958	-	100	100.000	ENSVVUG00000000489	RAB5A	100	100.000	Vulpes_vulpes
ENSDORG00000024958	-	100	93.519	ENSXETG00000002305	rab5a	100	93.519	Xenopus_tropicalis
ENSDORG00000024958	-	99	93.023	ENSXCOG00000020121	rab5aa	99	93.023	Xiphophorus_couchianus
ENSDORG00000024958	-	99	93.488	ENSXMAG00000028889	rab5aa	99	93.488	Xiphophorus_maculatus