EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000025063 (Gene tree)
Gene ID: 105989794
Gene Symbol: Rab5b
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 34733 bases
Position: chrKN672349.1:1283543-1318275
Accession: 105989794
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000024717	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000028879	-	3360	XM_013022015	ENSDORP00000024717	215 (aa)	XP_012877469	A0A1S3FN70

Gene Model

Click here to download ENSDORG00000025063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000025063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000025063	Rab5b	86	41.304	ENSDORG00000012048	Rab2b	85	41.304
ENSDORG00000025063	Rab5b	82	32.787	ENSDORG00000028079	Hras	96	32.787
ENSDORG00000025063	Rab5b	98	86.667	ENSDORG00000006819	Rab5c	97	86.667
ENSDORG00000025063	Rab5b	91	43.204	ENSDORG00000006304	Rab11b	94	43.204
ENSDORG00000025063	Rab5b	100	81.860	ENSDORG00000024958	-	100	81.860
ENSDORG00000025063	Rab5b	90	43.367	ENSDORG00000028628	-	95	43.367
ENSDORG00000025063	Rab5b	72	35.625	ENSDORG00000023607	Rab42	74	35.625
ENSDORG00000025063	Rab5b	77	45.783	ENSDORG00000026441	Rab6b	80	45.783
ENSDORG00000025063	Rab5b	79	42.938	ENSDORG00000028596	-	85	42.938
ENSDORG00000025063	Rab5b	90	37.949	ENSDORG00000000972	Rab35	96	37.949
ENSDORG00000025063	Rab5b	89	37.500	ENSDORG00000001591	Rab13	95	37.500
ENSDORG00000025063	Rab5b	78	43.452	ENSDORG00000015066	-	83	43.452
ENSDORG00000025063	Rab5b	75	43.478	ENSDORG00000025014	Rab2a	76	43.478
ENSDORG00000025063	Rab5b	93	35.294	ENSDORG00000009342	Rab9	99	35.294
ENSDORG00000025063	Rab5b	74	37.500	ENSDORG00000028344	Rab23	67	37.500
ENSDORG00000025063	Rab5b	83	31.111	ENSDORG00000025267	Nras	94	31.111
ENSDORG00000025063	Rab5b	78	35.882	ENSDORG00000029496	Rab39b	80	35.882
ENSDORG00000025063	Rab5b	55	30.159	ENSDORG00000028437	Arl4a	60	30.159
ENSDORG00000025063	Rab5b	77	45.181	ENSDORG00000027784	Rab6a	80	45.181
ENSDORG00000025063	Rab5b	71	35.948	ENSDORG00000000003	Rabl2	67	35.948
ENSDORG00000025063	Rab5b	82	45.198	ENSDORG00000002511	Rab1b	87	45.198
ENSDORG00000025063	Rab5b	78	42.857	ENSDORG00000010504	-	83	42.857
ENSDORG00000025063	Rab5b	78	42.442	ENSDORG00000027671	-	83	42.442
ENSDORG00000025063	Rab5b	85	35.326	ENSDORG00000008920	Rab12	81	35.326
ENSDORG00000025063	Rab5b	75	32.515	ENSDORG00000011469	-	85	32.515
ENSDORG00000025063	Rab5b	75	44.720	ENSDORG00000023851	Rab14	75	44.720
ENSDORG00000025063	Rab5b	78	41.071	ENSDORG00000029360	-	80	41.071
ENSDORG00000025063	Rab5b	83	37.705	ENSDORG00000024129	Rab33a	77	37.705
ENSDORG00000025063	Rab5b	82	39.344	ENSDORG00000023618	Rab33b	79	39.344
ENSDORG00000025063	Rab5b	75	46.584	ENSDORG00000002922	Rab25	76	46.584
ENSDORG00000025063	Rab5b	82	36.932	ENSDORG00000025986	Rab15	83	36.932
ENSDORG00000025063	Rab5b	62	30.282	ENSDORG00000023904	Arl8b	73	30.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000025063	Rab5b	100	100.000	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSDORG00000025063	Rab5b	100	98.618	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
ENSDORG00000025063	Rab5b	100	96.279	ENSACAG00000005380	RAB5B	100	96.279	Anolis_carolinensis
ENSDORG00000025063	Rab5b	100	100.000	ENSANAG00000033215	RAB5B	95	100.000	Aotus_nancymaae
ENSDORG00000025063	Rab5b	100	99.535	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
ENSDORG00000025063	Rab5b	100	100.000	ENSCJAG00000041780	RAB5B	95	100.000	Callithrix_jacchus
ENSDORG00000025063	Rab5b	100	100.000	ENSCAFG00000000087	RAB5B	100	100.000	Canis_familiaris
ENSDORG00000025063	Rab5b	100	100.000	ENSCAFG00020026094	RAB5B	100	100.000	Canis_lupus_dingo
ENSDORG00000025063	Rab5b	97	100.000	ENSCHIG00000010333	RAB5B	96	100.000	Capra_hircus
ENSDORG00000025063	Rab5b	100	99.535	ENSTSYG00000009576	RAB5B	100	99.535	Carlito_syrichta
ENSDORG00000025063	Rab5b	100	100.000	ENSCPOG00000034818	RAB5B	100	100.000	Cavia_porcellus
ENSDORG00000025063	Rab5b	100	99.070	ENSCCAG00000019480	RAB5B	100	99.070	Cebus_capucinus
ENSDORG00000025063	Rab5b	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSDORG00000025063	Rab5b	100	99.070	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
ENSDORG00000025063	Rab5b	100	96.279	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
ENSDORG00000025063	Rab5b	100	99.535	ENSCGRG00001000428	Rab5b	100	99.535	Cricetulus_griseus_chok1gshd
ENSDORG00000025063	Rab5b	100	99.535	ENSCGRG00000009508	-	100	99.535	Cricetulus_griseus_crigri
ENSDORG00000025063	Rab5b	100	99.535	ENSECAG00000023306	RAB5B	100	99.535	Equus_caballus
ENSDORG00000025063	Rab5b	100	99.070	ENSEEUG00000006745	RAB5B	100	99.070	Erinaceus_europaeus
ENSDORG00000025063	Rab5b	100	100.000	ENSFDAG00000008326	RAB5B	100	100.000	Fukomys_damarensis
ENSDORG00000025063	Rab5b	100	99.070	ENSHGLG00000005995	RAB5B	100	99.070	Heterocephalus_glaber_female
ENSDORG00000025063	Rab5b	100	99.070	ENSHGLG00100012955	RAB5B	100	99.070	Heterocephalus_glaber_male
ENSDORG00000025063	Rab5b	100	98.605	ENSSTOG00000010536	RAB5B	100	98.605	Ictidomys_tridecemlineatus
ENSDORG00000025063	Rab5b	100	99.535	ENSJJAG00000019506	Rab5b	100	99.535	Jaculus_jaculus
ENSDORG00000025063	Rab5b	100	99.078	ENSLAFG00000018009	RAB5B	95	99.078	Loxodonta_africana
ENSDORG00000025063	Rab5b	100	99.070	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
ENSDORG00000025063	Rab5b	100	99.070	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
ENSDORG00000025063	Rab5b	100	99.070	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
ENSDORG00000025063	Rab5b	100	99.070	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
ENSDORG00000025063	Rab5b	100	100.000	ENSMAUG00000011613	Rab5b	100	100.000	Mesocricetus_auratus
ENSDORG00000025063	Rab5b	100	99.535	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
ENSDORG00000025063	Rab5b	100	100.000	ENSMUSG00000000711	Rab5b	100	100.000	Mus_musculus
ENSDORG00000025063	Rab5b	100	100.000	MGP_PahariEiJ_G0031135	Rab5b	100	100.000	Mus_pahari
ENSDORG00000025063	Rab5b	100	99.535	MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	Mus_spretus
ENSDORG00000025063	Rab5b	99	98.611	ENSMPUG00000000946	RAB5B	89	98.611	Mustela_putorius_furo
ENSDORG00000025063	Rab5b	100	100.000	ENSNLEG00000017570	-	100	100.000	Nomascus_leucogenys
ENSDORG00000025063	Rab5b	100	100.000	ENSOPRG00000007883	RAB5B	100	100.000	Ochotona_princeps
ENSDORG00000025063	Rab5b	100	99.535	ENSODEG00000003860	RAB5B	100	99.535	Octodon_degus
ENSDORG00000025063	Rab5b	100	100.000	ENSOCUG00000013895	RAB5B	95	100.000	Oryctolagus_cuniculus
ENSDORG00000025063	Rab5b	100	100.000	ENSOARG00000010651	RAB5B	95	100.000	Ovis_aries
ENSDORG00000025063	Rab5b	100	100.000	ENSPPAG00000035431	RAB5B	100	100.000	Pan_paniscus
ENSDORG00000025063	Rab5b	100	100.000	ENSPTRG00000005071	RAB5B	97	99.522	Pan_troglodytes
ENSDORG00000025063	Rab5b	99	98.131	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
ENSDORG00000025063	Rab5b	100	100.000	ENSPCOG00000016461	RAB5B	100	100.000	Propithecus_coquereli
ENSDORG00000025063	Rab5b	100	99.070	ENSRNOG00000006130	Rab5b	100	99.070	Rattus_norvegicus
ENSDORG00000025063	Rab5b	100	99.070	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
ENSDORG00000025063	Rab5b	100	99.070	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
ENSDORG00000025063	Rab5b	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSDORG00000025063	Rab5b	100	98.605	ENSSHAG00000007727	RAB5B	100	98.605	Sarcophilus_harrisii
ENSDORG00000025063	Rab5b	100	100.000	ENSSARG00000006237	RAB5B	100	100.000	Sorex_araneus
ENSDORG00000025063	Rab5b	100	96.279	ENSSPUG00000014873	RAB5B	100	96.279	Sphenodon_punctatus
ENSDORG00000025063	Rab5b	100	100.000	ENSTTRG00000015001	RAB5B	100	100.000	Tursiops_truncatus
ENSDORG00000025063	Rab5b	100	99.535	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
ENSDORG00000025063	Rab5b	100	99.535	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
ENSDORG00000025063	Rab5b	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes