EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000025351 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 219 bases
Position: chrKN672360.1:10938094-10938312
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000020910	LSM	PF01423.22	1.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000036335	-	219	-	ENSDORP00000020910	72 (aa)	-	UPI000BAD0548

Gene Model

Click here to download ENSDORG00000025351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000025351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000025351	-	78	87.500	ENSDORG00000029740	-	68	87.500
ENSDORG00000025351	-	92	50.000	ENSDORG00000000933	Lsm6	83	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000025351	-	100	88.889	ENSG00000139343	SNRPF	84	88.889	Homo_sapiens
ENSDORG00000025351	-	99	87.324	ENSAPOG00000003377	snrpf	55	87.324	Acanthochromis_polyacanthus
ENSDORG00000025351	-	99	88.732	ENSAMEG00000002166	-	84	88.732	Ailuropoda_melanoleuca
ENSDORG00000025351	-	100	76.389	ENSAMEG00000018718	-	84	76.389	Ailuropoda_melanoleuca
ENSDORG00000025351	-	97	87.143	ENSACIG00000013216	snrpf	82	87.143	Amphilophus_citrinellus
ENSDORG00000025351	-	97	87.143	ENSAOCG00000015108	snrpf	82	87.143	Amphiprion_ocellaris
ENSDORG00000025351	-	97	87.143	ENSAPEG00000022022	snrpf	82	87.143	Amphiprion_percula
ENSDORG00000025351	-	97	87.143	ENSATEG00000022625	snrpf	75	87.143	Anabas_testudineus
ENSDORG00000025351	-	99	87.324	ENSACAG00000014073	SNRPF	82	87.324	Anolis_carolinensis
ENSDORG00000025351	-	100	61.111	ENSANAG00000025860	-	81	61.111	Aotus_nancymaae
ENSDORG00000025351	-	94	85.294	ENSANAG00000020297	-	62	85.294	Aotus_nancymaae
ENSDORG00000025351	-	100	88.889	ENSANAG00000032845	SNRPF	84	88.889	Aotus_nancymaae
ENSDORG00000025351	-	97	87.143	ENSACLG00000016066	snrpf	82	87.143	Astatotilapia_calliptera
ENSDORG00000025351	-	100	86.111	ENSAMXG00000007421	snrpf	84	86.111	Astyanax_mexicanus
ENSDORG00000025351	-	100	88.889	ENSBTAG00000016271	SNRPF	84	88.889	Bos_taurus
ENSDORG00000025351	-	100	83.333	ENSBTAG00000050012	-	89	83.333	Bos_taurus
ENSDORG00000025351	-	96	63.768	WBGene00004918	snr-5	81	63.768	Caenorhabditis_elegans
ENSDORG00000025351	-	100	88.889	ENSCJAG00000002705	-	84	88.889	Callithrix_jacchus
ENSDORG00000025351	-	100	81.944	ENSCAFG00000031151	-	84	81.944	Canis_familiaris
ENSDORG00000025351	-	100	88.889	ENSCAFG00000006395	-	65	88.889	Canis_familiaris
ENSDORG00000025351	-	93	85.075	ENSCAFG00020013161	-	71	85.075	Canis_lupus_dingo
ENSDORG00000025351	-	100	81.944	ENSCAFG00020010823	-	84	81.944	Canis_lupus_dingo
ENSDORG00000025351	-	100	76.389	ENSTSYG00000030635	-	83	76.389	Carlito_syrichta
ENSDORG00000025351	-	97	87.143	ENSTSYG00000031636	-	59	87.143	Carlito_syrichta
ENSDORG00000025351	-	100	84.932	ENSTSYG00000036502	-	84	84.932	Carlito_syrichta
ENSDORG00000025351	-	99	88.732	ENSCAPG00000007242	SNRPF	84	88.732	Cavia_aperea
ENSDORG00000025351	-	100	88.889	ENSCPOG00000013898	SNRPF	84	88.889	Cavia_porcellus
ENSDORG00000025351	-	100	80.556	ENSCCAG00000033627	-	57	80.556	Cebus_capucinus
ENSDORG00000025351	-	100	88.889	ENSCCAG00000017356	-	84	88.889	Cebus_capucinus
ENSDORG00000025351	-	100	88.889	ENSCCAG00000037378	-	84	88.889	Cebus_capucinus
ENSDORG00000025351	-	100	88.889	ENSCLAG00000007200	SNRPF	84	88.889	Chinchilla_lanigera
ENSDORG00000025351	-	100	88.889	ENSCSAG00000003602	-	59	88.889	Chlorocebus_sabaeus
ENSDORG00000025351	-	88	88.889	ENSCHOG00000009392	SNRPF	98	88.889	Choloepus_hoffmanni
ENSDORG00000025351	-	100	79.167	ENSCPBG00000001985	-	86	79.167	Chrysemys_picta_bellii
ENSDORG00000025351	-	100	83.333	ENSCPBG00000006227	-	84	83.333	Chrysemys_picta_bellii
ENSDORG00000025351	-	97	87.143	ENSCPBG00000024287	-	56	87.143	Chrysemys_picta_bellii
ENSDORG00000025351	-	100	80.556	ENSCPBG00000026463	-	84	80.556	Chrysemys_picta_bellii
ENSDORG00000025351	-	99	80.282	ENSCSAVG00000007498	-	81	80.282	Ciona_savignyi
ENSDORG00000025351	-	100	88.889	ENSCGRG00001017100	-	84	88.889	Cricetulus_griseus_chok1gshd
ENSDORG00000025351	-	100	80.556	ENSCGRG00001008965	-	56	80.556	Cricetulus_griseus_chok1gshd
ENSDORG00000025351	-	100	88.889	ENSCGRG00000000336	-	84	88.889	Cricetulus_griseus_crigri
ENSDORG00000025351	-	100	80.556	ENSCGRG00000018878	-	90	80.556	Cricetulus_griseus_crigri
ENSDORG00000025351	-	100	86.111	ENSCSEG00000004748	snrpf	84	86.111	Cynoglossus_semilaevis
ENSDORG00000025351	-	99	87.324	ENSCVAG00000000397	snrpf	56	87.324	Cyprinodon_variegatus
ENSDORG00000025351	-	100	85.135	ENSDARG00000105037	snrpf	84	85.135	Danio_rerio
ENSDORG00000025351	-	100	87.500	ENSDNOG00000048989	-	64	87.500	Dasypus_novemcinctus
ENSDORG00000025351	-	100	73.611	ENSDNOG00000049373	-	63	73.611	Dasypus_novemcinctus
ENSDORG00000025351	-	97	72.857	FBgn0000426	SmF	80	72.857	Drosophila_melanogaster
ENSDORG00000025351	-	100	88.889	ENSETEG00000001558	-	84	88.889	Echinops_telfairi
ENSDORG00000025351	-	93	74.627	ENSEBUG00000001793	-	72	74.627	Eptatretus_burgeri
ENSDORG00000025351	-	100	88.889	ENSECAG00000019817	SNRPF	59	88.889	Equus_caballus
ENSDORG00000025351	-	99	88.732	ENSEEUG00000013509	SNRPF	84	88.732	Erinaceus_europaeus
ENSDORG00000025351	-	100	84.722	ENSELUG00000007737	RUXF	83	84.722	Esox_lucius
ENSDORG00000025351	-	100	86.111	ENSELUG00000003121	RUXF	84	86.111	Esox_lucius
ENSDORG00000025351	-	100	88.889	ENSFCAG00000029966	-	84	88.889	Felis_catus
ENSDORG00000025351	-	100	68.056	ENSFCAG00000021942	-	83	68.056	Felis_catus
ENSDORG00000025351	-	99	69.014	ENSFCAG00000031148	-	65	69.014	Felis_catus
ENSDORG00000025351	-	99	88.732	ENSFALG00000010799	SNRPF	83	88.732	Ficedula_albicollis
ENSDORG00000025351	-	100	88.889	ENSFDAG00000002831	-	84	88.889	Fukomys_damarensis
ENSDORG00000025351	-	99	87.324	ENSFHEG00000003240	snrpf	62	87.324	Fundulus_heteroclitus
ENSDORG00000025351	-	99	87.324	ENSGMOG00000007741	snrpf	84	87.324	Gadus_morhua
ENSDORG00000025351	-	100	88.889	ENSGALG00000011409	SNRPF	84	88.889	Gallus_gallus
ENSDORG00000025351	-	97	87.143	ENSGAFG00000016187	snrpf	80	87.143	Gambusia_affinis
ENSDORG00000025351	-	99	87.324	ENSGACG00000020055	snrpf	84	87.324	Gasterosteus_aculeatus
ENSDORG00000025351	-	83	86.667	ENSGAGG00000012945	-	66	83.333	Gopherus_agassizii
ENSDORG00000025351	-	96	75.362	ENSGAGG00000014132	-	83	75.362	Gopherus_agassizii
ENSDORG00000025351	-	86	85.484	ENSGAGG00000020974	-	52	85.484	Gopherus_agassizii
ENSDORG00000025351	-	90	84.615	ENSGAGG00000022991	-	76	84.615	Gopherus_agassizii
ENSDORG00000025351	-	64	84.783	ENSGAGG00000011163	-	81	84.783	Gopherus_agassizii
ENSDORG00000025351	-	100	70.833	ENSGGOG00000039936	-	79	70.833	Gorilla_gorilla
ENSDORG00000025351	-	100	88.889	ENSGGOG00000001127	-	84	88.889	Gorilla_gorilla
ENSDORG00000025351	-	100	66.667	ENSGGOG00000039564	-	86	66.667	Gorilla_gorilla
ENSDORG00000025351	-	100	88.889	ENSHGLG00000009108	SNRPF	84	88.889	Heterocephalus_glaber_female
ENSDORG00000025351	-	100	87.500	ENSHGLG00000021172	-	84	87.500	Heterocephalus_glaber_female
ENSDORG00000025351	-	100	87.500	ENSHGLG00100019596	-	84	87.500	Heterocephalus_glaber_male
ENSDORG00000025351	-	99	88.732	ENSHGLG00100008103	-	84	88.732	Heterocephalus_glaber_male
ENSDORG00000025351	-	88	75.714	ENSHCOG00000018663	snrpf	55	75.714	Hippocampus_comes
ENSDORG00000025351	-	100	87.500	ENSIPUG00000018994	snrpf	84	87.500	Ictalurus_punctatus
ENSDORG00000025351	-	100	88.889	ENSSTOG00000010434	-	84	88.889	Ictidomys_tridecemlineatus
ENSDORG00000025351	-	100	75.000	ENSJJAG00000004558	-	86	75.000	Jaculus_jaculus
ENSDORG00000025351	-	100	88.889	ENSJJAG00000011272	-	84	88.889	Jaculus_jaculus
ENSDORG00000025351	-	74	84.906	ENSJJAG00000004828	-	82	84.906	Jaculus_jaculus
ENSDORG00000025351	-	100	81.944	ENSJJAG00000010502	-	86	81.944	Jaculus_jaculus
ENSDORG00000025351	-	100	86.111	ENSKMAG00000013566	snrpf	84	86.111	Kryptolebias_marmoratus
ENSDORG00000025351	-	100	86.111	ENSLBEG00000008800	snrpf	84	86.111	Labrus_bergylta
ENSDORG00000025351	-	100	87.500	ENSLACG00000002456	-	62	87.500	Latimeria_chalumnae
ENSDORG00000025351	-	100	86.111	ENSLOCG00000015744	snrpf	84	86.111	Lepisosteus_oculatus
ENSDORG00000025351	-	99	88.732	ENSLAFG00000017426	SNRPF	83	88.732	Loxodonta_africana
ENSDORG00000025351	-	97	85.714	ENSMAMG00000016593	snrpf	82	85.714	Mastacembelus_armatus
ENSDORG00000025351	-	97	87.143	ENSMZEG00005014701	snrpf	82	87.143	Maylandia_zebra
ENSDORG00000025351	-	99	87.324	ENSMGAG00000011453	-	63	88.571	Meleagris_gallopavo
ENSDORG00000025351	-	100	86.111	ENSMAUG00000008799	-	84	86.111	Mesocricetus_auratus
ENSDORG00000025351	-	83	90.000	ENSMAUG00000019737	-	81	90.000	Mesocricetus_auratus
ENSDORG00000025351	-	96	66.667	ENSMAUG00000010289	-	82	66.667	Mesocricetus_auratus
ENSDORG00000025351	-	83	90.000	ENSMAUG00000016909	-	81	90.000	Mesocricetus_auratus
ENSDORG00000025351	-	100	88.889	ENSMICG00000012153	-	84	88.889	Microcebus_murinus
ENSDORG00000025351	-	100	84.722	ENSMICG00000030494	-	58	84.722	Microcebus_murinus
ENSDORG00000025351	-	100	75.000	ENSMOCG00000022166	-	79	75.000	Microtus_ochrogaster
ENSDORG00000025351	-	100	88.889	ENSMOCG00000020437	Snrpf	84	88.889	Microtus_ochrogaster
ENSDORG00000025351	-	90	75.385	ENSMOCG00000020220	-	83	75.385	Microtus_ochrogaster
ENSDORG00000025351	-	99	85.915	ENSMMOG00000007127	snrpf	83	85.915	Mola_mola
ENSDORG00000025351	-	100	88.889	ENSMODG00000008091	SNRPF	63	88.889	Monodelphis_domestica
ENSDORG00000025351	-	97	87.143	ENSMALG00000012328	snrpf	82	87.143	Monopterus_albus
ENSDORG00000025351	-	100	88.889	MGP_CAROLIEiJ_G0015735	-	84	88.889	Mus_caroli
ENSDORG00000025351	-	100	88.889	ENSMUSG00000020018	Snrpf	84	88.889	Mus_musculus
ENSDORG00000025351	-	100	88.889	MGP_PahariEiJ_G0031350	Snrpf	84	88.889	Mus_pahari
ENSDORG00000025351	-	100	88.889	MGP_SPRETEiJ_G0016553	Snrpf	84	88.889	Mus_spretus
ENSDORG00000025351	-	100	88.889	ENSMPUG00000007176	-	64	88.889	Mustela_putorius_furo
ENSDORG00000025351	-	100	70.833	ENSMLUG00000026269	-	68	70.833	Myotis_lucifugus
ENSDORG00000025351	-	99	88.732	ENSMLUG00000013577	-	84	88.732	Myotis_lucifugus
ENSDORG00000025351	-	100	88.889	ENSMLUG00000026149	-	68	88.889	Myotis_lucifugus
ENSDORG00000025351	-	100	88.889	ENSMLUG00000029201	-	68	88.889	Myotis_lucifugus
ENSDORG00000025351	-	100	88.889	ENSMLUG00000027932	-	68	88.889	Myotis_lucifugus
ENSDORG00000025351	-	100	88.889	ENSNGAG00000024292	-	84	88.889	Nannospalax_galili
ENSDORG00000025351	-	79	84.211	ENSNGAG00000005851	-	67	84.211	Nannospalax_galili
ENSDORG00000025351	-	99	87.324	ENSNBRG00000011682	snrpf	72	87.324	Neolamprologus_brichardi
ENSDORG00000025351	-	99	61.972	ENSMEUG00000000671	SNRPF	84	61.972	Notamacropus_eugenii
ENSDORG00000025351	-	100	88.889	ENSODEG00000010328	-	84	88.889	Octodon_degus
ENSDORG00000025351	-	100	87.500	ENSOCUG00000010925	SNRPF	64	87.500	Oryctolagus_cuniculus
ENSDORG00000025351	-	99	85.915	ENSORLG00020008216	snrpf	83	85.915	Oryzias_latipes_hni
ENSDORG00000025351	-	99	85.915	ENSORLG00015007418	snrpf	83	85.915	Oryzias_latipes_hsok
ENSDORG00000025351	-	97	87.143	ENSOMEG00000003018	snrpf	82	87.143	Oryzias_melastigma
ENSDORG00000025351	-	100	87.500	ENSOGAG00000030323	-	84	87.500	Otolemur_garnettii
ENSDORG00000025351	-	100	88.889	ENSOARG00000011853	-	63	88.889	Ovis_aries
ENSDORG00000025351	-	100	66.667	ENSPPAG00000037479	-	86	66.667	Pan_paniscus
ENSDORG00000025351	-	100	70.833	ENSPPAG00000037544	-	79	70.833	Pan_paniscus
ENSDORG00000025351	-	100	69.444	ENSPPRG00000007449	-	73	69.444	Panthera_pardus
ENSDORG00000025351	-	100	88.889	ENSPPRG00000005875	-	84	88.889	Panthera_pardus
ENSDORG00000025351	-	100	88.889	ENSPTIG00000007520	SNRPF	84	88.889	Panthera_tigris_altaica
ENSDORG00000025351	-	100	69.444	ENSPTIG00000005117	-	86	69.444	Panthera_tigris_altaica
ENSDORG00000025351	-	100	70.833	ENSPTRG00000043814	-	79	70.833	Pan_troglodytes
ENSDORG00000025351	-	100	66.667	ENSPTRG00000047717	-	86	66.667	Pan_troglodytes
ENSDORG00000025351	-	99	87.324	ENSPKIG00000014784	snrpf	78	87.324	Paramormyrops_kingsleyae
ENSDORG00000025351	-	99	88.732	ENSPSIG00000016462	SNRPF	83	88.732	Pelodiscus_sinensis
ENSDORG00000025351	-	99	85.915	ENSPMGG00000023548	snrpf	83	85.915	Periophthalmus_magnuspinnatus
ENSDORG00000025351	-	100	88.889	ENSPEMG00000023326	Snrpf	84	88.889	Peromyscus_maniculatus_bairdii
ENSDORG00000025351	-	97	87.143	ENSPLAG00000023932	snrpf	82	87.143	Poecilia_latipinna
ENSDORG00000025351	-	97	87.143	ENSPMEG00000003377	snrpf	82	87.143	Poecilia_mexicana
ENSDORG00000025351	-	97	87.143	ENSPREG00000022635	snrpf	80	87.143	Poecilia_reticulata
ENSDORG00000025351	-	100	88.889	ENSPPYG00000004847	-	84	88.889	Pongo_abelii
ENSDORG00000025351	-	100	88.889	ENSPCOG00000023833	-	84	88.889	Propithecus_coquereli
ENSDORG00000025351	-	100	88.889	ENSPVAG00000009036	SNRPF	84	88.889	Pteropus_vampyrus
ENSDORG00000025351	-	97	87.143	ENSPNYG00000021712	snrpf	82	87.143	Pundamilia_nyererei
ENSDORG00000025351	-	97	87.143	ENSPNAG00000019117	snrpf	82	87.143	Pygocentrus_nattereri
ENSDORG00000025351	-	100	88.889	ENSRNOG00000005556	Snrpf	84	88.889	Rattus_norvegicus
ENSDORG00000025351	-	100	88.889	ENSRBIG00000030414	-	84	88.889	Rhinopithecus_bieti
ENSDORG00000025351	-	100	88.889	ENSRROG00000021975	-	84	88.889	Rhinopithecus_roxellana
ENSDORG00000025351	-	96	50.000	YPR182W	SMX3	81	50.000	Saccharomyces_cerevisiae
ENSDORG00000025351	-	100	75.000	ENSSBOG00000032297	-	82	75.000	Saimiri_boliviensis_boliviensis
ENSDORG00000025351	-	100	88.889	ENSSBOG00000012868	-	84	88.889	Saimiri_boliviensis_boliviensis
ENSDORG00000025351	-	100	88.889	ENSSBOG00000036179	-	84	88.889	Saimiri_boliviensis_boliviensis
ENSDORG00000025351	-	100	74.667	ENSSBOG00000027638	-	84	74.667	Saimiri_boliviensis_boliviensis
ENSDORG00000025351	-	99	88.732	ENSSHAG00000012294	SNRPF	64	88.732	Sarcophilus_harrisii
ENSDORG00000025351	-	89	85.938	ENSSFOG00015021523	snrpf	96	85.938	Scleropages_formosus
ENSDORG00000025351	-	100	86.111	ENSSMAG00000005533	snrpf	83	86.111	Scophthalmus_maximus
ENSDORG00000025351	-	90	86.154	ENSSDUG00000016283	snrpf	77	86.154	Seriola_dumerili
ENSDORG00000025351	-	99	66.197	ENSSLDG00000003885	-	87	66.197	Seriola_lalandi_dorsalis
ENSDORG00000025351	-	100	86.111	ENSSLDG00000005119	snrpf	84	86.111	Seriola_lalandi_dorsalis
ENSDORG00000025351	-	97	88.571	ENSSPUG00000014590	-	82	88.571	Sphenodon_punctatus
ENSDORG00000025351	-	99	87.324	ENSSPAG00000003283	snrpf	81	87.324	Stegastes_partitus
ENSDORG00000025351	-	100	88.889	ENSSSCG00000000895	SNRPF	84	88.889	Sus_scrofa
ENSDORG00000025351	-	76	85.455	ENSTRUG00000014956	snrpf	80	85.455	Takifugu_rubripes
ENSDORG00000025351	-	100	86.111	ENSTNIG00000012672	snrpf	84	86.111	Tetraodon_nigroviridis
ENSDORG00000025351	-	100	62.500	ENSTTRG00000006070	SNRPF	84	62.500	Tursiops_truncatus
ENSDORG00000025351	-	100	77.778	ENSUAMG00000001101	-	85	77.778	Ursus_americanus
ENSDORG00000025351	-	100	88.889	ENSUAMG00000008176	-	84	88.889	Ursus_americanus
ENSDORG00000025351	-	100	77.778	ENSUMAG00000006177	-	85	77.778	Ursus_maritimus
ENSDORG00000025351	-	100	88.889	ENSUMAG00000003528	-	84	88.889	Ursus_maritimus
ENSDORG00000025351	-	100	88.889	ENSVPAG00000008712	-	84	88.889	Vicugna_pacos
ENSDORG00000025351	-	100	81.944	ENSVVUG00000023821	-	92	81.944	Vulpes_vulpes
ENSDORG00000025351	-	99	64.384	ENSXETG00000021630	snrpf	84	64.384	Xenopus_tropicalis
ENSDORG00000025351	-	97	87.143	ENSXCOG00000013860	snrpf	80	87.143	Xiphophorus_couchianus
ENSDORG00000025351	-	97	87.143	ENSXMAG00000015448	snrpf	82	87.143	Xiphophorus_maculatus