EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000025371 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 849 bases
Position: chrABRO02091299.1:1854-2702
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000017391	PRP38	PF03371.15	4.6e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000031174	-	849	-	ENSDORP00000017391	282 (aa)	-	UPI000BAD1A90

Gene Model

Click here to download ENSDORG00000025371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000025371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000025371	-	62	95.833	ENSDORG00000023857	-	82	68.821
ENSDORG00000025371	-	100	100.000	ENSDORG00000023691	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000025371	-	78	87.665	ENSG00000134748	PRPF38A	84	83.270	Homo_sapiens
ENSDORG00000025371	-	67	88.298	ENSAPOG00000011652	prpf38a	84	74.905	Acanthochromis_polyacanthus
ENSDORG00000025371	-	78	87.665	ENSAMEG00000009319	PRPF38A	84	83.270	Ailuropoda_melanoleuca
ENSDORG00000025371	-	75	80.275	ENSACIG00000012292	prpf38a	85	74.330	Amphilophus_citrinellus
ENSDORG00000025371	-	67	88.298	ENSAOCG00000018004	prpf38a	84	74.905	Amphiprion_ocellaris
ENSDORG00000025371	-	67	88.298	ENSAPEG00000021414	prpf38a	84	74.905	Amphiprion_percula
ENSDORG00000025371	-	66	88.770	ENSATEG00000004608	prpf38a	84	75.285	Anabas_testudineus
ENSDORG00000025371	-	55	83.333	ENSAPLG00000005827	PRPF38A	90	75.446	Anas_platyrhynchos
ENSDORG00000025371	-	78	84.141	ENSACAG00000008249	PRPF38A	84	79.848	Anolis_carolinensis
ENSDORG00000025371	-	78	56.710	ENSANAG00000029204	-	82	54.511	Aotus_nancymaae
ENSDORG00000025371	-	78	87.665	ENSANAG00000027839	PRPF38A	84	83.270	Aotus_nancymaae
ENSDORG00000025371	-	75	78.899	ENSACLG00000021595	prpf38a	84	72.624	Astatotilapia_calliptera
ENSDORG00000025371	-	76	80.455	ENSAMXG00000029274	prpf38a	92	70.690	Astyanax_mexicanus
ENSDORG00000025371	-	89	79.923	ENSBTAG00000002720	PRPF38A	89	80.682	Bos_taurus
ENSDORG00000025371	-	69	62.564	WBGene00008380	prp-38	55	66.102	Caenorhabditis_elegans
ENSDORG00000025371	-	78	87.665	ENSCJAG00000021594	PRPF38A	96	80.277	Callithrix_jacchus
ENSDORG00000025371	-	78	87.665	ENSCAFG00000003740	PRPF38A	84	83.270	Canis_familiaris
ENSDORG00000025371	-	78	87.665	ENSCAFG00020010939	PRPF38A	84	83.270	Canis_lupus_dingo
ENSDORG00000025371	-	78	87.665	ENSCHIG00000024730	PRPF38A	84	83.270	Capra_hircus
ENSDORG00000025371	-	63	85.326	ENSTSYG00000031994	-	78	80.455	Carlito_syrichta
ENSDORG00000025371	-	78	87.665	ENSTSYG00000009868	-	84	83.270	Carlito_syrichta
ENSDORG00000025371	-	89	80.469	ENSCPOG00000005079	PRPF38A	84	83.270	Cavia_porcellus
ENSDORG00000025371	-	78	87.665	ENSCCAG00000026502	PRPF38A	85	83.270	Cebus_capucinus
ENSDORG00000025371	-	78	52.036	ENSCATG00000044190	-	82	50.195	Cercocebus_atys
ENSDORG00000025371	-	78	87.665	ENSCATG00000032296	PRPF38A	84	83.270	Cercocebus_atys
ENSDORG00000025371	-	78	87.665	ENSCLAG00000005816	PRPF38A	84	83.270	Chinchilla_lanigera
ENSDORG00000025371	-	56	93.750	ENSCHOG00000008388	PRPF38A	62	93.750	Choloepus_hoffmanni
ENSDORG00000025371	-	78	85.903	ENSCPBG00000014791	PRPF38A	84	81.749	Chrysemys_picta_bellii
ENSDORG00000025371	-	79	65.351	ENSCSAVG00000009580	-	77	64.583	Ciona_savignyi
ENSDORG00000025371	-	78	87.665	ENSCANG00000032608	PRPF38A	88	83.270	Colobus_angolensis_palliatus
ENSDORG00000025371	-	78	87.665	ENSCGRG00001018502	-	84	83.270	Cricetulus_griseus_chok1gshd
ENSDORG00000025371	-	78	76.652	ENSCGRG00001002557	-	88	72.348	Cricetulus_griseus_chok1gshd
ENSDORG00000025371	-	78	87.665	ENSCGRG00000014868	Prpf38a	84	83.270	Cricetulus_griseus_crigri
ENSDORG00000025371	-	75	80.734	ENSCSEG00000001269	prpf38a	89	74.713	Cynoglossus_semilaevis
ENSDORG00000025371	-	75	83.028	ENSCVAG00000012305	prpf38a	84	76.046	Cyprinodon_variegatus
ENSDORG00000025371	-	76	79.091	ENSDARG00000039213	prpf38a	92	70.690	Danio_rerio
ENSDORG00000025371	-	78	87.665	ENSDNOG00000042326	PRPF38A	86	83.270	Dasypus_novemcinctus
ENSDORG00000025371	-	72	71.220	FBgn0050342	Prp38	55	75.410	Drosophila_melanogaster
ENSDORG00000025371	-	83	73.251	ENSEBUG00000012588	prpf38a	85	70.787	Eptatretus_burgeri
ENSDORG00000025371	-	78	87.665	ENSEASG00005014427	PRPF38A	84	83.270	Equus_asinus_asinus
ENSDORG00000025371	-	78	87.665	ENSECAG00000022628	PRPF38A	84	83.270	Equus_caballus
ENSDORG00000025371	-	75	80.275	ENSELUG00000021094	prpf38a	88	74.046	Esox_lucius
ENSDORG00000025371	-	78	87.665	ENSFCAG00000002518	PRPF38A	84	83.270	Felis_catus
ENSDORG00000025371	-	64	82.888	ENSFALG00000005598	-	82	78.378	Ficedula_albicollis
ENSDORG00000025371	-	79	81.579	ENSFALG00000003612	-	85	75.954	Ficedula_albicollis
ENSDORG00000025371	-	89	81.679	ENSFDAG00000011287	PRPF38A	84	83.270	Fukomys_damarensis
ENSDORG00000025371	-	75	82.949	ENSFHEG00000014317	prpf38a	88	75.954	Fundulus_heteroclitus
ENSDORG00000025371	-	59	89.759	ENSGMOG00000011384	prpf38a	54	89.759	Gadus_morhua
ENSDORG00000025371	-	78	86.344	ENSGALG00000010627	PRPF38A	84	81.749	Gallus_gallus
ENSDORG00000025371	-	75	82.569	ENSGAFG00000012422	prpf38a	84	75.665	Gambusia_affinis
ENSDORG00000025371	-	75	78.733	ENSGACG00000005423	prpf38a	85	72.453	Gasterosteus_aculeatus
ENSDORG00000025371	-	78	86.344	ENSGAGG00000020547	PRPF38A	84	82.129	Gopherus_agassizii
ENSDORG00000025371	-	78	87.665	ENSGGOG00000003940	PRPF38A	84	83.270	Gorilla_gorilla
ENSDORG00000025371	-	67	86.243	ENSHBUG00000020572	prpf38a	78	86.339	Haplochromis_burtoni
ENSDORG00000025371	-	78	77.434	ENSHGLG00000007918	-	84	74.905	Heterocephalus_glaber_female
ENSDORG00000025371	-	78	87.665	ENSHGLG00000000475	PRPF38A	84	83.270	Heterocephalus_glaber_female
ENSDORG00000025371	-	78	87.665	ENSHGLG00100008935	PRPF38A	84	83.270	Heterocephalus_glaber_male
ENSDORG00000025371	-	78	77.434	ENSHGLG00100003928	-	84	74.905	Heterocephalus_glaber_male
ENSDORG00000025371	-	65	86.264	ENSHCOG00000020781	prpf38a	83	69.202	Hippocampus_comes
ENSDORG00000025371	-	78	80.263	ENSIPUG00000005757	prpf38a	93	71.379	Ictalurus_punctatus
ENSDORG00000025371	-	78	87.665	ENSSTOG00000015610	PRPF38A	84	83.270	Ictidomys_tridecemlineatus
ENSDORG00000025371	-	78	87.225	ENSJJAG00000015811	Prpf38a	84	82.890	Jaculus_jaculus
ENSDORG00000025371	-	75	82.569	ENSKMAG00000006588	prpf38a	84	75.665	Kryptolebias_marmoratus
ENSDORG00000025371	-	67	86.243	ENSLBEG00000020585	prpf38a	84	74.525	Labrus_bergylta
ENSDORG00000025371	-	77	81.250	ENSLACG00000011495	PRPF38A	84	77.186	Latimeria_chalumnae
ENSDORG00000025371	-	67	88.360	ENSLOCG00000006262	prpf38a	85	75.758	Lepisosteus_oculatus
ENSDORG00000025371	-	78	87.665	ENSLAFG00000025862	PRPF38A	84	83.270	Loxodonta_africana
ENSDORG00000025371	-	78	87.665	ENSMFAG00000039449	PRPF38A	95	79.720	Macaca_fascicularis
ENSDORG00000025371	-	64	85.027	ENSMMUG00000014333	PRPF38A	80	80.269	Macaca_mulatta
ENSDORG00000025371	-	78	52.036	ENSMNEG00000040242	-	82	50.195	Macaca_nemestrina
ENSDORG00000025371	-	78	87.665	ENSMNEG00000031221	PRPF38A	84	83.270	Macaca_nemestrina
ENSDORG00000025371	-	78	87.665	ENSMLEG00000041105	PRPF38A	84	83.270	Mandrillus_leucophaeus
ENSDORG00000025371	-	75	80.734	ENSMAMG00000015431	prpf38a	88	74.046	Mastacembelus_armatus
ENSDORG00000025371	-	75	78.899	ENSMZEG00005017838	prpf38a	84	72.624	Maylandia_zebra
ENSDORG00000025371	-	78	86.344	ENSMGAG00000011176	PRPF38A	88	81.749	Meleagris_gallopavo
ENSDORG00000025371	-	78	82.379	ENSMAUG00000018029	-	99	78.244	Mesocricetus_auratus
ENSDORG00000025371	-	78	87.665	ENSMICG00000014193	PRPF38A	84	83.270	Microcebus_murinus
ENSDORG00000025371	-	78	87.665	ENSMOCG00000013080	Prpf38a	84	83.270	Microtus_ochrogaster
ENSDORG00000025371	-	89	73.828	ENSMMOG00000016972	prpf38a	91	75.285	Mola_mola
ENSDORG00000025371	-	78	85.526	ENSMODG00000000644	PRPF38A	84	81.439	Monodelphis_domestica
ENSDORG00000025371	-	75	80.734	ENSMALG00000019363	prpf38a	82	74.144	Monopterus_albus
ENSDORG00000025371	-	78	86.784	MGP_CAROLIEiJ_G0026269	Prpf38a	84	82.510	Mus_caroli
ENSDORG00000025371	-	78	86.784	ENSMUSG00000063800	Prpf38a	84	82.510	Mus_musculus
ENSDORG00000025371	-	78	86.784	MGP_PahariEiJ_G0028602	Prpf38a	84	82.510	Mus_pahari
ENSDORG00000025371	-	78	86.784	MGP_SPRETEiJ_G0027238	Prpf38a	90	91.803	Mus_spretus
ENSDORG00000025371	-	78	87.665	ENSMPUG00000006896	PRPF38A	84	83.270	Mustela_putorius_furo
ENSDORG00000025371	-	78	87.665	ENSNGAG00000011884	Prpf38a	84	83.270	Nannospalax_galili
ENSDORG00000025371	-	75	77.523	ENSNBRG00000004013	prpf38a	83	72.031	Neolamprologus_brichardi
ENSDORG00000025371	-	99	55.556	ENSNLEG00000012592	-	93	59.375	Nomascus_leucogenys
ENSDORG00000025371	-	70	87.255	ENSNLEG00000017999	PRPF38A	77	82.500	Nomascus_leucogenys
ENSDORG00000025371	-	99	47.059	ENSNLEG00000033398	-	76	50.951	Nomascus_leucogenys
ENSDORG00000025371	-	78	84.581	ENSMEUG00000003860	PRPF38A	84	80.228	Notamacropus_eugenii
ENSDORG00000025371	-	78	87.665	ENSOPRG00000008985	PRPF38A	99	85.356	Ochotona_princeps
ENSDORG00000025371	-	78	87.665	ENSODEG00000005869	PRPF38A	84	83.270	Octodon_degus
ENSDORG00000025371	-	75	79.358	ENSONIG00000007816	prpf38a	84	73.004	Oreochromis_niloticus
ENSDORG00000025371	-	78	43.231	ENSOANG00000009541	-	84	44.528	Ornithorhynchus_anatinus
ENSDORG00000025371	-	78	87.665	ENSOCUG00000000963	PRPF38A	84	83.270	Oryctolagus_cuniculus
ENSDORG00000025371	-	75	82.569	ENSORLG00000013485	prpf38a	90	76.772	Oryzias_latipes
ENSDORG00000025371	-	75	82.569	ENSORLG00020002130	prpf38a	90	76.772	Oryzias_latipes_hni
ENSDORG00000025371	-	82	78.205	ENSORLG00015021393	prpf38a	88	75.573	Oryzias_latipes_hsok
ENSDORG00000025371	-	75	82.110	ENSOMEG00000016333	prpf38a	92	72.318	Oryzias_melastigma
ENSDORG00000025371	-	78	87.665	ENSOGAG00000005423	PRPF38A	84	83.270	Otolemur_garnettii
ENSDORG00000025371	-	78	87.665	ENSOARG00000005373	PRPF38A	84	83.270	Ovis_aries
ENSDORG00000025371	-	100	62.069	ENSPPAG00000033867	-	84	64.865	Pan_paniscus
ENSDORG00000025371	-	78	87.665	ENSPPAG00000030905	PRPF38A	84	83.270	Pan_paniscus
ENSDORG00000025371	-	78	87.665	ENSPPRG00000013268	PRPF38A	84	83.270	Panthera_pardus
ENSDORG00000025371	-	78	87.665	ENSPTIG00000015419	PRPF38A	84	83.270	Panthera_tigris_altaica
ENSDORG00000025371	-	78	87.665	ENSPTRG00000000739	PRPF38A	88	80.682	Pan_troglodytes
ENSDORG00000025371	-	78	87.665	ENSPANG00000015483	PRPF38A	84	83.270	Papio_anubis
ENSDORG00000025371	-	67	87.234	ENSPKIG00000011439	prpf38a	85	74.905	Paramormyrops_kingsleyae
ENSDORG00000025371	-	78	85.463	ENSPSIG00000017487	PRPF38A	84	80.989	Pelodiscus_sinensis
ENSDORG00000025371	-	75	81.106	ENSPMGG00000021352	prpf38a	91	71.698	Periophthalmus_magnuspinnatus
ENSDORG00000025371	-	77	81.778	ENSPEMG00000011212	-	84	76.226	Peromyscus_maniculatus_bairdii
ENSDORG00000025371	-	78	87.665	ENSPEMG00000023277	-	84	83.270	Peromyscus_maniculatus_bairdii
ENSDORG00000025371	-	78	85.088	ENSPCIG00000022369	-	84	81.061	Phascolarctos_cinereus
ENSDORG00000025371	-	75	82.569	ENSPFOG00000004248	prpf38a	84	75.665	Poecilia_formosa
ENSDORG00000025371	-	89	74.000	ENSPLAG00000010328	prpf38a	84	75.665	Poecilia_latipinna
ENSDORG00000025371	-	89	74.000	ENSPMEG00000011804	prpf38a	84	75.676	Poecilia_mexicana
ENSDORG00000025371	-	67	89.362	ENSPREG00000002835	prpf38a	56	89.071	Poecilia_reticulata
ENSDORG00000025371	-	78	76.724	ENSPPYG00000001348	PRPF38A	84	73.881	Pongo_abelii
ENSDORG00000025371	-	78	87.665	ENSPCAG00000013328	PRPF38A	84	83.270	Procavia_capensis
ENSDORG00000025371	-	78	87.665	ENSPCOG00000016387	-	84	83.270	Propithecus_coquereli
ENSDORG00000025371	-	97	68.248	ENSPCOG00000020709	-	86	69.380	Propithecus_coquereli
ENSDORG00000025371	-	78	87.665	ENSPVAG00000009803	PRPF38A	84	83.270	Pteropus_vampyrus
ENSDORG00000025371	-	75	78.899	ENSPNYG00000005571	prpf38a	84	72.624	Pundamilia_nyererei
ENSDORG00000025371	-	76	81.364	ENSPNAG00000010399	prpf38a	92	71.379	Pygocentrus_nattereri
ENSDORG00000025371	-	78	87.665	ENSRNOG00000009451	Prpf38a	84	83.270	Rattus_norvegicus
ENSDORG00000025371	-	78	87.665	ENSRBIG00000036442	PRPF38A	88	83.270	Rhinopithecus_bieti
ENSDORG00000025371	-	90	63.740	ENSRROG00000040003	-	84	64.504	Rhinopithecus_roxellana
ENSDORG00000025371	-	78	87.665	ENSRROG00000032788	PRPF38A	84	83.270	Rhinopithecus_roxellana
ENSDORG00000025371	-	78	87.665	ENSSBOG00000019515	PRPF38A	84	83.270	Saimiri_boliviensis_boliviensis
ENSDORG00000025371	-	63	82.796	ENSSHAG00000006906	-	82	78.378	Sarcophilus_harrisii
ENSDORG00000025371	-	84	71.074	ENSSHAG00000006029	-	94	65.018	Sarcophilus_harrisii
ENSDORG00000025371	-	67	88.298	ENSSFOG00015013572	prpf38a	85	74.621	Scleropages_formosus
ENSDORG00000025371	-	75	80.734	ENSSMAG00000015379	prpf38a	85	75.285	Scophthalmus_maximus
ENSDORG00000025371	-	75	81.651	ENSSDUG00000001324	prpf38a	84	76.046	Seriola_dumerili
ENSDORG00000025371	-	75	81.651	ENSSLDG00000014803	prpf38a	84	76.046	Seriola_lalandi_dorsalis
ENSDORG00000025371	-	78	64.758	ENSSARG00000014458	PRPF38A	84	63.498	Sorex_araneus
ENSDORG00000025371	-	78	83.700	ENSSPUG00000013259	PRPF38A	84	78.707	Sphenodon_punctatus
ENSDORG00000025371	-	67	69.149	ENSSPAG00000010449	prpf38a	82	60.687	Stegastes_partitus
ENSDORG00000025371	-	78	87.665	ENSSSCG00000028288	PRPF38A	84	83.270	Sus_scrofa
ENSDORG00000025371	-	79	80.263	ENSTGUG00000008995	PRPF38A	84	76.806	Taeniopygia_guttata
ENSDORG00000025371	-	75	81.193	ENSTRUG00000003374	prpf38a	78	75.197	Takifugu_rubripes
ENSDORG00000025371	-	75	79.545	ENSTNIG00000005533	prpf38a	85	74.340	Tetraodon_nigroviridis
ENSDORG00000025371	-	78	87.665	ENSTBEG00000000725	PRPF38A	84	83.270	Tupaia_belangeri
ENSDORG00000025371	-	78	87.665	ENSTTRG00000016139	PRPF38A	84	83.270	Tursiops_truncatus
ENSDORG00000025371	-	78	87.665	ENSUAMG00000000625	PRPF38A	84	83.270	Ursus_americanus
ENSDORG00000025371	-	78	87.665	ENSUMAG00000022674	PRPF38A	84	83.270	Ursus_maritimus
ENSDORG00000025371	-	78	88.106	ENSVPAG00000000907	PRPF38A	84	83.650	Vicugna_pacos
ENSDORG00000025371	-	78	87.665	ENSVVUG00000004475	PRPF38A	84	83.270	Vulpes_vulpes
ENSDORG00000025371	-	76	79.909	ENSXETG00000008060	prpf38a	84	74.525	Xenopus_tropicalis
ENSDORG00000025371	-	75	80.455	ENSXCOG00000007393	prpf38a	91	70.652	Xiphophorus_couchianus
ENSDORG00000025371	-	75	82.569	ENSXMAG00000026143	prpf38a	84	75.665	Xiphophorus_maculatus