EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000026133 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 7920 bases
Position: chrKN672438.1:4567293-4575212
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	1	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	2	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	3	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	4	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	5	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	6	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	7	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	8	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	9	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	10	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	11	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	12	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	13	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	14	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	15	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	16	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	17	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	18	19
ENSDORP00000022779	zf-C2H2	PF00096.26	8.4e-126	19	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	1	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	2	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	3	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	4	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	5	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	6	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	7	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	8	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	9	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	10	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	11	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	12	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	13	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	14	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	15	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	16	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	17	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	18	19
ENSDORP00000026038	zf-C2H2	PF00096.26	2.6e-125	19	19
ENSDORP00000022779	zf-met	PF12874.7	2.8e-07	1	1
ENSDORP00000026038	zf-met	PF12874.7	7.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000036378	-	2310	-	ENSDORP00000026038	769 (aa)	-	UPI000BAD2A64
ENSDORT00000028411	-	2208	-	ENSDORP00000022779	735 (aa)	-	UPI000BAD26F7

Gene Model

Click here to download ENSDORG00000026133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000026133's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000026133	-	90	39.209	ENSDORG00000000387	Zfp408	59	38.929
ENSDORG00000026133	-	99	51.269	ENSDORG00000009396	Zfp354a	100	51.365
ENSDORG00000026133	-	87	39.259	ENSDORG00000029620	Snai2	65	39.259
ENSDORG00000026133	-	98	54.493	ENSDORG00000023595	Zfp35	90	54.493
ENSDORG00000026133	-	99	55.906	ENSDORG00000016625	Zfp661	99	55.906
ENSDORG00000026133	-	90	31.115	ENSDORG00000023200	Zfp865	83	32.177
ENSDORG00000026133	-	90	35.294	ENSDORG00000009702	Zfp574	94	35.309
ENSDORG00000026133	-	91	40.532	ENSDORG00000007739	Prdm5	79	40.532
ENSDORG00000026133	-	86	49.057	ENSDORG00000002702	Sall3	74	35.714
ENSDORG00000026133	-	84	35.412	ENSDORG00000027637	Zfp319	91	34.105
ENSDORG00000026133	-	99	55.357	ENSDORG00000023529	Zfp13	71	55.357
ENSDORG00000026133	-	89	39.815	ENSDORG00000023772	Zfp423	98	39.815
ENSDORG00000026133	-	90	48.031	ENSDORG00000023443	-	100	48.031
ENSDORG00000026133	-	88	40.566	ENSDORG00000013725	Wt1	63	39.450
ENSDORG00000026133	-	82	42.105	ENSDORG00000028510	Ovol1	61	42.105
ENSDORG00000026133	-	99	56.225	ENSDORG00000011934	Zfp1	99	56.225
ENSDORG00000026133	-	83	50.000	ENSDORG00000006979	Rreb1	52	50.000
ENSDORG00000026133	-	87	43.519	ENSDORG00000025372	Snai1	57	43.519
ENSDORG00000026133	-	90	31.050	ENSDORG00000023834	Patz1	53	31.050
ENSDORG00000026133	-	89	50.735	ENSDORG00000005538	Bcl6b	70	50.735
ENSDORG00000026133	-	92	52.364	ENSDORG00000009870	Zfp768	51	51.799
ENSDORG00000026133	-	99	48.183	ENSDORG00000027564	Zfp26	94	41.383
ENSDORG00000026133	-	96	49.038	ENSDORG00000024150	-	97	60.859
ENSDORG00000026133	-	82	39.000	ENSDORG00000016697	Ovol2	57	39.000
ENSDORG00000026133	-	79	56.604	ENSDORG00000012841	Sall4	50	45.455
ENSDORG00000026133	-	99	49.339	ENSDORG00000014484	Zfp334	99	45.106

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000026133	-	94	85.501	ENSDNOG00000038073	-	92	85.501	Dasypus_novemcinctus
ENSDORG00000026133	-	91	88.490	ENSFDAG00000010369	-	100	88.490	Fukomys_damarensis
ENSDORG00000026133	-	91	88.939	ENSHGLG00000014546	-	99	88.972	Heterocephalus_glaber_female
ENSDORG00000026133	-	91	88.939	ENSHGLG00100019290	-	99	88.972	Heterocephalus_glaber_male
ENSDORG00000026133	-	99	87.243	ENSODEG00000015543	-	99	87.260	Octodon_degus