EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000026275 (Gene tree)
Gene ID: 105996173
Gene Symbol: Prpf4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 14197 bases
Position: chrKN672473.1:8133265-8147461
Accession: 105996173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000020881	PRP4	PF08799.11	4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000027053	-	2659	XM_013030174	ENSDORP00000020881	521 (aa)	XP_012885628	A0A1S3G9X5

Gene Model

Click here to download ENSDORG00000026275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000026275's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000026275	Prpf4	56	31.138	ENSDORG00000007377	Tbl3	65	30.000
ENSDORG00000026275	Prpf4	57	32.203	ENSDORG00000013903	Poc1b	66	32.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000026275	Prpf4	100	99.232	ENSG00000136875	PRPF4	100	99.232	Homo_sapiens
ENSDORG00000026275	Prpf4	96	77.824	ENSAPOG00000014132	prpf4	98	77.824	Acanthochromis_polyacanthus
ENSDORG00000026275	Prpf4	100	99.424	ENSAMEG00000013048	PRPF4	98	99.424	Ailuropoda_melanoleuca
ENSDORG00000026275	Prpf4	96	77.579	ENSACIG00000005579	prpf4	99	77.579	Amphilophus_citrinellus
ENSDORG00000026275	Prpf4	96	77.228	ENSAOCG00000005457	prpf4	99	77.228	Amphiprion_ocellaris
ENSDORG00000026275	Prpf4	96	77.030	ENSAPEG00000000776	prpf4	99	77.030	Amphiprion_percula
ENSDORG00000026275	Prpf4	96	76.984	ENSATEG00000023013	prpf4	99	76.984	Anabas_testudineus
ENSDORG00000026275	Prpf4	100	89.251	ENSAPLG00000006534	PRPF4	97	89.251	Anas_platyrhynchos
ENSDORG00000026275	Prpf4	100	90.440	ENSACAG00000015110	PRPF4	100	90.440	Anolis_carolinensis
ENSDORG00000026275	Prpf4	100	99.616	ENSANAG00000022464	PRPF4	96	99.616	Aotus_nancymaae
ENSDORG00000026275	Prpf4	96	77.381	ENSACLG00000019031	prpf4	99	77.381	Astatotilapia_calliptera
ENSDORG00000026275	Prpf4	97	62.188	ENSAMXG00000006756	prpf4	99	73.069	Astyanax_mexicanus
ENSDORG00000026275	Prpf4	100	98.656	ENSBTAG00000004571	PRPF4	100	98.656	Bos_taurus
ENSDORG00000026275	Prpf4	90	44.211	WBGene00007972	prp-4	96	44.211	Caenorhabditis_elegans
ENSDORG00000026275	Prpf4	100	99.425	ENSCJAG00000017856	PRPF4	100	99.425	Callithrix_jacchus
ENSDORG00000026275	Prpf4	100	99.424	ENSCAFG00000003224	PRPF4	97	99.424	Canis_familiaris
ENSDORG00000026275	Prpf4	100	99.424	ENSCAFG00020022637	PRPF4	100	99.424	Canis_lupus_dingo
ENSDORG00000026275	Prpf4	100	98.851	ENSCHIG00000024648	-	100	98.851	Capra_hircus
ENSDORG00000026275	Prpf4	100	99.232	ENSTSYG00000010366	PRPF4	100	99.232	Carlito_syrichta
ENSDORG00000026275	Prpf4	88	88.067	ENSCAPG00000008935	PRPF4	97	88.067	Cavia_aperea
ENSDORG00000026275	Prpf4	100	92.322	ENSCPOG00000014729	-	100	92.322	Cavia_porcellus
ENSDORG00000026275	Prpf4	100	98.848	ENSCPOG00000010747	-	100	98.848	Cavia_porcellus
ENSDORG00000026275	Prpf4	100	99.424	ENSCCAG00000028990	PRPF4	100	99.424	Cebus_capucinus
ENSDORG00000026275	Prpf4	100	99.232	ENSCATG00000021552	PRPF4	100	99.232	Cercocebus_atys
ENSDORG00000026275	Prpf4	100	99.040	ENSCLAG00000013448	PRPF4	100	99.040	Chinchilla_lanigera
ENSDORG00000026275	Prpf4	87	95.575	ENSCHOG00000007233	PRPF4	100	95.575	Choloepus_hoffmanni
ENSDORG00000026275	Prpf4	99	91.456	ENSCPBG00000019136	PRPF4	74	91.456	Chrysemys_picta_bellii
ENSDORG00000026275	Prpf4	96	59.449	ENSCING00000001299	-	97	58.812	Ciona_intestinalis
ENSDORG00000026275	Prpf4	96	57.738	ENSCSAVG00000009178	-	99	59.091	Ciona_savignyi
ENSDORG00000026275	Prpf4	100	99.424	ENSCANG00000003246	PRPF4	100	99.424	Colobus_angolensis_palliatus
ENSDORG00000026275	Prpf4	100	99.232	ENSCGRG00001016992	Prpf4	100	99.232	Cricetulus_griseus_chok1gshd
ENSDORG00000026275	Prpf4	100	99.232	ENSCGRG00000017560	Prpf4	100	99.232	Cricetulus_griseus_crigri
ENSDORG00000026275	Prpf4	97	76.238	ENSCSEG00000020451	prpf4	99	76.238	Cynoglossus_semilaevis
ENSDORG00000026275	Prpf4	97	79.406	ENSDARG00000067639	prpf4	99	79.406	Danio_rerio
ENSDORG00000026275	Prpf4	100	98.851	ENSDNOG00000013203	PRPF4	100	98.851	Dasypus_novemcinctus
ENSDORG00000026275	Prpf4	87	56.455	FBgn0036733	U4-U6-60K	99	50.365	Drosophila_melanogaster
ENSDORG00000026275	Prpf4	100	97.132	ENSETEG00000020389	PRPF4	100	97.132	Echinops_telfairi
ENSDORG00000026275	Prpf4	95	72.811	ENSEBUG00000015229	prpf4	86	73.272	Eptatretus_burgeri
ENSDORG00000026275	Prpf4	100	99.616	ENSEASG00005022678	PRPF4	100	99.616	Equus_asinus_asinus
ENSDORG00000026275	Prpf4	100	99.616	ENSECAG00000007072	PRPF4	100	99.616	Equus_caballus
ENSDORG00000026275	Prpf4	100	78.166	ENSEEUG00000007480	PRPF4	100	78.166	Erinaceus_europaeus
ENSDORG00000026275	Prpf4	97	80.396	ENSELUG00000007510	prpf4	99	80.396	Esox_lucius
ENSDORG00000026275	Prpf4	100	99.425	ENSFCAG00000005514	PRPF4	100	99.425	Felis_catus
ENSDORG00000026275	Prpf4	98	88.789	ENSFALG00000005423	PRPF4	90	86.022	Ficedula_albicollis
ENSDORG00000026275	Prpf4	100	98.848	ENSFDAG00000005839	PRPF4	100	98.848	Fukomys_damarensis
ENSDORG00000026275	Prpf4	96	76.587	ENSFHEG00000001300	prpf4	99	76.587	Fundulus_heteroclitus
ENSDORG00000026275	Prpf4	98	90.215	ENSGALG00000008857	PRPF4	96	89.535	Gallus_gallus
ENSDORG00000026275	Prpf4	65	71.471	ENSGAFG00000012164	prpf4	70	71.471	Gambusia_affinis
ENSDORG00000026275	Prpf4	96	70.040	ENSGACG00000015476	prpf4	99	69.246	Gasterosteus_aculeatus
ENSDORG00000026275	Prpf4	99	91.262	ENSGAGG00000025029	PRPF4	95	91.262	Gopherus_agassizii
ENSDORG00000026275	Prpf4	100	99.232	ENSGGOG00000006943	PRPF4	100	99.232	Gorilla_gorilla
ENSDORG00000026275	Prpf4	96	77.183	ENSHBUG00000000562	prpf4	99	77.183	Haplochromis_burtoni
ENSDORG00000026275	Prpf4	100	81.644	ENSHGLG00000016628	-	100	82.409	Heterocephalus_glaber_female
ENSDORG00000026275	Prpf4	100	80.230	ENSHGLG00000003838	-	100	80.230	Heterocephalus_glaber_female
ENSDORG00000026275	Prpf4	100	98.848	ENSHGLG00000015191	PRPF4	100	98.848	Heterocephalus_glaber_female
ENSDORG00000026275	Prpf4	100	80.230	ENSHGLG00100005571	-	100	80.230	Heterocephalus_glaber_male
ENSDORG00000026275	Prpf4	97	78.416	ENSIPUG00000017956	PRPF4	99	78.416	Ictalurus_punctatus
ENSDORG00000026275	Prpf4	100	99.040	ENSSTOG00000027833	PRPF4	100	99.040	Ictidomys_tridecemlineatus
ENSDORG00000026275	Prpf4	100	99.232	ENSJJAG00000008838	Prpf4	100	99.232	Jaculus_jaculus
ENSDORG00000026275	Prpf4	96	76.587	ENSKMAG00000013236	prpf4	99	76.587	Kryptolebias_marmoratus
ENSDORG00000026275	Prpf4	96	76.295	ENSLBEG00000020611	prpf4	99	76.295	Labrus_bergylta
ENSDORG00000026275	Prpf4	99	79.961	ENSLACG00000016317	PRPF4	99	79.961	Latimeria_chalumnae
ENSDORG00000026275	Prpf4	97	81.782	ENSLOCG00000000581	prpf4	99	81.782	Lepisosteus_oculatus
ENSDORG00000026275	Prpf4	100	98.659	ENSLAFG00000018225	PRPF4	100	98.659	Loxodonta_africana
ENSDORG00000026275	Prpf4	100	99.040	ENSMFAG00000039397	PRPF4	100	99.040	Macaca_fascicularis
ENSDORG00000026275	Prpf4	100	99.232	ENSMMUG00000005844	PRPF4	100	99.232	Macaca_mulatta
ENSDORG00000026275	Prpf4	100	88.484	ENSMNEG00000033737	PRPF4	100	88.484	Macaca_nemestrina
ENSDORG00000026275	Prpf4	100	99.232	ENSMLEG00000040284	PRPF4	100	99.232	Mandrillus_leucophaeus
ENSDORG00000026275	Prpf4	97	76.529	ENSMAMG00000020141	prpf4	99	76.529	Mastacembelus_armatus
ENSDORG00000026275	Prpf4	96	77.381	ENSMZEG00005023205	prpf4	99	77.381	Maylandia_zebra
ENSDORG00000026275	Prpf4	99	88.462	ENSMGAG00000001796	PRPF4	97	88.462	Meleagris_gallopavo
ENSDORG00000026275	Prpf4	100	98.656	ENSMAUG00000018022	Prpf4	100	98.656	Mesocricetus_auratus
ENSDORG00000026275	Prpf4	100	98.464	ENSMICG00000015022	PRPF4	100	98.276	Microcebus_murinus
ENSDORG00000026275	Prpf4	100	98.656	ENSMOCG00000018273	Prpf4	100	98.656	Microtus_ochrogaster
ENSDORG00000026275	Prpf4	97	75.248	ENSMMOG00000021177	prpf4	99	75.248	Mola_mola
ENSDORG00000026275	Prpf4	100	95.029	ENSMODG00000004444	-	100	95.029	Monodelphis_domestica
ENSDORG00000026275	Prpf4	100	95.220	ENSMODG00000025096	-	97	95.220	Monodelphis_domestica
ENSDORG00000026275	Prpf4	96	76.984	ENSMALG00000013624	prpf4	99	76.984	Monopterus_albus
ENSDORG00000026275	Prpf4	100	99.040	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.040	Mus_caroli
ENSDORG00000026275	Prpf4	100	99.040	ENSMUSG00000066148	Prpf4	100	99.040	Mus_musculus
ENSDORG00000026275	Prpf4	100	98.848	MGP_PahariEiJ_G0028413	Prpf4	100	98.848	Mus_pahari
ENSDORG00000026275	Prpf4	100	99.040	MGP_SPRETEiJ_G0027042	Prpf4	100	99.040	Mus_spretus
ENSDORG00000026275	Prpf4	100	99.424	ENSMPUG00000007883	PRPF4	100	99.424	Mustela_putorius_furo
ENSDORG00000026275	Prpf4	100	97.121	ENSMLUG00000008626	-	97	97.121	Myotis_lucifugus
ENSDORG00000026275	Prpf4	100	99.040	ENSMLUG00000015309	-	97	99.040	Myotis_lucifugus
ENSDORG00000026275	Prpf4	100	93.858	ENSNGAG00000000468	Prpf4	100	93.858	Nannospalax_galili
ENSDORG00000026275	Prpf4	96	77.579	ENSNBRG00000007972	prpf4	99	77.579	Neolamprologus_brichardi
ENSDORG00000026275	Prpf4	100	99.616	ENSNLEG00000016647	PRPF4	100	99.616	Nomascus_leucogenys
ENSDORG00000026275	Prpf4	99	95.136	ENSMEUG00000013256	PRPF4	100	95.136	Notamacropus_eugenii
ENSDORG00000026275	Prpf4	100	99.042	ENSOPRG00000005302	PRPF4	100	99.042	Ochotona_princeps
ENSDORG00000026275	Prpf4	100	99.232	ENSODEG00000018147	PRPF4	100	99.232	Octodon_degus
ENSDORG00000026275	Prpf4	99	75.670	ENSONIG00000012671	prpf4	99	77.381	Oreochromis_niloticus
ENSDORG00000026275	Prpf4	100	99.808	ENSOCUG00000005046	PRPF4	100	99.808	Oryctolagus_cuniculus
ENSDORG00000026275	Prpf4	96	75.299	ENSORLG00000019641	prpf4	99	75.299	Oryzias_latipes
ENSDORG00000026275	Prpf4	96	75.299	ENSORLG00020019438	prpf4	99	75.299	Oryzias_latipes_hni
ENSDORG00000026275	Prpf4	96	75.158	ENSOMEG00000020941	prpf4	99	75.158	Oryzias_melastigma
ENSDORG00000026275	Prpf4	100	94.626	ENSOGAG00000007802	PRPF4	98	94.626	Otolemur_garnettii
ENSDORG00000026275	Prpf4	100	99.040	ENSOARG00000006319	PRPF4	97	99.040	Ovis_aries
ENSDORG00000026275	Prpf4	100	99.232	ENSPPAG00000041797	PRPF4	100	99.232	Pan_paniscus
ENSDORG00000026275	Prpf4	100	99.616	ENSPPRG00000014360	PRPF4	100	99.616	Panthera_pardus
ENSDORG00000026275	Prpf4	100	99.616	ENSPTIG00000009574	PRPF4	100	99.616	Panthera_tigris_altaica
ENSDORG00000026275	Prpf4	100	99.232	ENSPTRG00000021274	PRPF4	100	99.042	Pan_troglodytes
ENSDORG00000026275	Prpf4	100	99.040	ENSPANG00000025776	PRPF4	96	99.040	Papio_anubis
ENSDORG00000026275	Prpf4	97	80.792	ENSPKIG00000017259	prpf4	99	80.792	Paramormyrops_kingsleyae
ENSDORG00000026275	Prpf4	100	89.827	ENSPSIG00000010713	PRPF4	91	90.347	Pelodiscus_sinensis
ENSDORG00000026275	Prpf4	99	58.974	ENSPMGG00000000997	prpf4	99	59.083	Periophthalmus_magnuspinnatus
ENSDORG00000026275	Prpf4	100	99.232	ENSPEMG00000024115	Prpf4	100	99.232	Peromyscus_maniculatus_bairdii
ENSDORG00000026275	Prpf4	99	95.136	ENSPCIG00000003821	PRPF4	99	95.136	Phascolarctos_cinereus
ENSDORG00000026275	Prpf4	96	70.414	ENSPFOG00000013524	prpf4	98	73.292	Poecilia_formosa
ENSDORG00000026275	Prpf4	62	71.865	ENSPLAG00000011620	prpf4	96	72.360	Poecilia_latipinna
ENSDORG00000026275	Prpf4	92	74.398	ENSPMEG00000006813	prpf4	98	74.398	Poecilia_mexicana
ENSDORG00000026275	Prpf4	98	99.025	ENSPCAG00000002561	PRPF4	99	99.025	Procavia_capensis
ENSDORG00000026275	Prpf4	100	99.040	ENSPCOG00000011975	PRPF4	100	99.040	Propithecus_coquereli
ENSDORG00000026275	Prpf4	100	95.402	ENSPVAG00000004708	PRPF4	100	95.402	Pteropus_vampyrus
ENSDORG00000026275	Prpf4	96	77.381	ENSPNYG00000008013	prpf4	99	77.381	Pundamilia_nyererei
ENSDORG00000026275	Prpf4	97	80.000	ENSPNAG00000000697	prpf4	99	80.000	Pygocentrus_nattereri
ENSDORG00000026275	Prpf4	100	98.848	ENSRNOG00000014777	Prpf4	100	98.848	Rattus_norvegicus
ENSDORG00000026275	Prpf4	100	99.424	ENSRBIG00000040221	PRPF4	100	99.424	Rhinopithecus_bieti
ENSDORG00000026275	Prpf4	100	99.424	ENSRROG00000040240	PRPF4	100	99.424	Rhinopithecus_roxellana
ENSDORG00000026275	Prpf4	100	95.602	ENSSHAG00000017658	PRPF4	100	95.602	Sarcophilus_harrisii
ENSDORG00000026275	Prpf4	97	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSDORG00000026275	Prpf4	96	75.992	ENSSMAG00000008889	prpf4	99	75.992	Scophthalmus_maximus
ENSDORG00000026275	Prpf4	96	73.705	ENSSDUG00000022083	prpf4	98	73.904	Seriola_dumerili
ENSDORG00000026275	Prpf4	96	73.904	ENSSLDG00000008115	prpf4	98	74.104	Seriola_lalandi_dorsalis
ENSDORG00000026275	Prpf4	100	90.979	ENSSPUG00000015582	PRPF4	100	90.979	Sphenodon_punctatus
ENSDORG00000026275	Prpf4	96	71.598	ENSSPAG00000011286	prpf4	99	71.598	Stegastes_partitus
ENSDORG00000026275	Prpf4	100	99.616	ENSSSCG00000024648	PRPF4	100	99.616	Sus_scrofa
ENSDORG00000026275	Prpf4	95	90.872	ENSTGUG00000002623	PRPF4	100	91.207	Taeniopygia_guttata
ENSDORG00000026275	Prpf4	97	75.494	ENSTRUG00000008853	prpf4	99	75.494	Takifugu_rubripes
ENSDORG00000026275	Prpf4	97	75.248	ENSTNIG00000013250	prpf4	99	75.248	Tetraodon_nigroviridis
ENSDORG00000026275	Prpf4	100	90.421	ENSTBEG00000000821	PRPF4	100	90.421	Tupaia_belangeri
ENSDORG00000026275	Prpf4	82	98.993	ENSTTRG00000003246	PRPF4	85	98.993	Tursiops_truncatus
ENSDORG00000026275	Prpf4	64	96.407	ENSUAMG00000018288	PRPF4	90	96.407	Ursus_americanus
ENSDORG00000026275	Prpf4	100	98.656	ENSUMAG00000019375	PRPF4	100	98.656	Ursus_maritimus
ENSDORG00000026275	Prpf4	100	98.851	ENSVPAG00000005281	PRPF4	100	98.851	Vicugna_pacos
ENSDORG00000026275	Prpf4	100	98.286	ENSVVUG00000002476	PRPF4	100	98.286	Vulpes_vulpes
ENSDORG00000026275	Prpf4	69	58.333	ENSXCOG00000006101	prpf4	93	59.606	Xiphophorus_couchianus
ENSDORG00000026275	Prpf4	88	64.629	ENSXMAG00000002750	prpf4	98	65.606	Xiphophorus_maculatus