EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000026425 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 52953 bases
Position: chrKN672375.1:5426435-5479387
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000016085	RRM_1	PF00076.22	1.5e-31	1	2
ENSDORP00000016085	RRM_1	PF00076.22	1.5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000032183	-	1047	-	ENSDORP00000016085	348 (aa)	-	UPI000BAD1509

Gene Model

Click here to download ENSDORG00000026425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000026425's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000026425	-	68	51.261	ENSDORG00000011155	-	54	60.440
ENSDORG00000026425	-	51	35.065	ENSDORG00000015481	-	97	33.333
ENSDORG00000026425	-	51	35.882	ENSDORG00000011015	Hnrnpab	65	35.602
ENSDORG00000026425	-	50	31.792	ENSDORG00000024157	-	63	31.282
ENSDORG00000026425	-	52	56.111	ENSDORG00000024966	-	75	56.044
ENSDORG00000026425	-	51	59.551	ENSDORG00000027821	-	60	57.592
ENSDORG00000026425	-	74	46.565	ENSDORG00000005482	Hnrnpa2b1	63	53.333
ENSDORG00000026425	-	54	56.410	ENSDORG00000028230	-	50	55.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000026425	-	52	62.778	ENSACIG00000021815	-	90	61.979	Amphilophus_citrinellus
ENSDORG00000026425	-	61	54.930	ENSAOCG00000005289	-	59	55.779	Amphiprion_ocellaris
ENSDORG00000026425	-	61	54.930	ENSAPEG00000004179	-	59	55.779	Amphiprion_percula
ENSDORG00000026425	-	56	54.639	ENSATEG00000022918	hnrnpa1a	90	54.922	Anabas_testudineus
ENSDORG00000026425	-	50	73.885	ENSATEG00000003423	-	75	72.956	Anabas_testudineus
ENSDORG00000026425	-	54	88.360	ENSACAG00000017109	-	60	86.802	Anolis_carolinensis
ENSDORG00000026425	-	64	43.494	ENSACLG00000006940	-	61	56.281	Astatotilapia_calliptera
ENSDORG00000026425	-	51	57.955	ENSAMXG00000006296	hnrnpa1a	50	56.250	Astyanax_mexicanus
ENSDORG00000026425	-	56	61.856	ENSCSEG00000014051	-	74	68.023	Cynoglossus_semilaevis
ENSDORG00000026425	-	68	50.633	ENSCSEG00000007589	hnrnpa1a	74	55.838	Cynoglossus_semilaevis
ENSDORG00000026425	-	59	53.883	ENSDARG00000011020	hnrnpa1a	53	54.762	Danio_rerio
ENSDORG00000026425	-	53	56.757	ENSELUG00000007372	-	61	47.727	Esox_lucius
ENSDORG00000026425	-	52	66.484	ENSGMOG00000020353	-	99	65.816	Gadus_morhua
ENSDORG00000026425	-	50	64.000	ENSGAFG00000016803	-	59	61.111	Gambusia_affinis
ENSDORG00000026425	-	61	55.399	ENSGAFG00000007751	-	58	56.281	Gambusia_affinis
ENSDORG00000026425	-	60	47.210	ENSGACG00000009435	-	52	56.477	Gasterosteus_aculeatus
ENSDORG00000026425	-	61	54.028	ENSHBUG00000005647	hnrnpa1a	62	56.281	Haplochromis_burtoni
ENSDORG00000026425	-	56	54.359	ENSIPUG00000002023	hnrnpa1a	73	54.639	Ictalurus_punctatus
ENSDORG00000026425	-	52	70.879	ENSIPUG00000001991	-	82	69.948	Ictalurus_punctatus
ENSDORG00000026425	-	51	56.983	ENSIPUG00000022440	-	76	53.039	Ictalurus_punctatus
ENSDORG00000026425	-	52	57.222	ENSKMAG00000020859	-	58	56.281	Kryptolebias_marmoratus
ENSDORG00000026425	-	52	51.366	ENSMFAG00000028351	-	56	50.761	Macaca_fascicularis
ENSDORG00000026425	-	62	44.030	ENSMAMG00000007606	-	57	54.404	Mastacembelus_armatus
ENSDORG00000026425	-	79	44.891	ENSMZEG00005027173	hnrnpa1a	78	44.444	Maylandia_zebra
ENSDORG00000026425	-	68	50.211	ENSMMOG00000008251	hnrnpa1a	76	56.593	Mola_mola
ENSDORG00000026425	-	60	52.404	ENSMALG00000014091	hnrnpa1a	56	54.404	Monopterus_albus
ENSDORG00000026425	-	53	62.162	ENSMALG00000008886	-	89	60.309	Monopterus_albus
ENSDORG00000026425	-	79	44.891	ENSNBRG00000018441	-	62	56.281	Neolamprologus_brichardi
ENSDORG00000026425	-	55	64.975	ENSNBRG00000014469	-	84	69.061	Neolamprologus_brichardi
ENSDORG00000026425	-	79	48.000	ENSORLG00000008001	-	57	56.477	Oryzias_latipes
ENSDORG00000026425	-	65	54.630	ENSORLG00000029240	-	98	54.872	Oryzias_latipes
ENSDORG00000026425	-	64	50.222	ENSORLG00020022498	-	89	55.102	Oryzias_latipes_hni
ENSDORG00000026425	-	79	48.000	ENSORLG00020006582	hnrnpa1a	89	56.701	Oryzias_latipes_hni
ENSDORG00000026425	-	57	57.071	ENSORLG00020006043	-	61	61.326	Oryzias_latipes_hni
ENSDORG00000026425	-	79	48.000	ENSORLG00015022294	-	57	56.477	Oryzias_latipes_hsok
ENSDORG00000026425	-	79	48.727	ENSOMEG00000015959	-	60	56.000	Oryzias_melastigma
ENSDORG00000026425	-	60	52.404	ENSPMGG00000011804	hnrnpa1a	73	56.410	Periophthalmus_magnuspinnatus
ENSDORG00000026425	-	67	70.930	ENSPMGG00000016392	-	93	69.714	Periophthalmus_magnuspinnatus
ENSDORG00000026425	-	61	55.399	ENSPFOG00000001825	-	75	46.825	Poecilia_formosa
ENSDORG00000026425	-	61	55.399	ENSPMEG00000002425	-	75	46.825	Poecilia_mexicana
ENSDORG00000026425	-	54	66.492	ENSPNYG00000020729	-	92	69.061	Pundamilia_nyererei
ENSDORG00000026425	-	51	57.865	ENSPNAG00000007752	hnrnpa1a	80	54.726	Pygocentrus_nattereri
ENSDORG00000026425	-	55	54.922	ENSPNAG00000021630	-	60	55.497	Pygocentrus_nattereri
ENSDORG00000026425	-	50	72.727	ENSSMAG00000010279	-	94	71.856	Scophthalmus_maximus
ENSDORG00000026425	-	53	55.249	ENSSMAG00000004641	hnrnpa1a	63	54.359	Scophthalmus_maximus
ENSDORG00000026425	-	51	63.068	ENSSMAG00000010246	-	83	62.500	Scophthalmus_maximus
ENSDORG00000026425	-	71	49.600	ENSSDUG00000013908	hnrnpa1a	90	54.922	Seriola_dumerili
ENSDORG00000026425	-	68	51.477	ENSSLDG00000003718	hnrnpa1a	86	53.889	Seriola_lalandi_dorsalis
ENSDORG00000026425	-	61	54.028	ENSSPAG00000018518	-	60	54.822	Stegastes_partitus
ENSDORG00000026425	-	74	47.510	ENSTRUG00000020491	-	58	55.208	Takifugu_rubripes
ENSDORG00000026425	-	86	59.316	ENSTNIG00000007398	-	74	69.072	Tetraodon_nigroviridis
ENSDORG00000026425	-	59	53.623	ENSXCOG00000009001	-	90	53.623	Xiphophorus_couchianus
ENSDORG00000026425	-	59	52.036	ENSXMAG00000008076	-	57	55.779	Xiphophorus_maculatus