EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000026656 (Gene tree)
Gene ID: 105982030
Gene Symbol: Rpusd1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 2273 bases
Position: chrKN672360.1:16060080-16062352
Accession: 105982030
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000025440	PseudoU_synth_2	PF00849.22	2.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000035484	-	1569	XM_013011439	ENSDORP00000025440	303 (aa)	XP_012866893	A0A1S3ER67

Gene Model

Click here to download ENSDORG00000026656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000026656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000026656	Rpusd1	100	83.654	ENSG00000007376	RPUSD1	100	89.881	Homo_sapiens
ENSDORG00000026656	Rpusd1	98	56.954	ENSAPOG00000022221	rpusd1	98	56.954	Acanthochromis_polyacanthus
ENSDORG00000026656	Rpusd1	100	86.139	ENSAMEG00000007461	RPUSD1	100	84.488	Ailuropoda_melanoleuca
ENSDORG00000026656	Rpusd1	98	58.170	ENSACIG00000015863	rpusd1	98	58.170	Amphilophus_citrinellus
ENSDORG00000026656	Rpusd1	98	56.066	ENSAOCG00000021975	rpusd1	95	56.066	Amphiprion_ocellaris
ENSDORG00000026656	Rpusd1	98	56.393	ENSAPEG00000001316	rpusd1	95	56.393	Amphiprion_percula
ENSDORG00000026656	Rpusd1	83	64.822	ENSATEG00000002984	rpusd1	98	57.049	Anabas_testudineus
ENSDORG00000026656	Rpusd1	78	59.426	ENSAPLG00000012316	RPUSD1	100	57.787	Anas_platyrhynchos
ENSDORG00000026656	Rpusd1	99	68.092	ENSACAG00000008953	RPUSD1	100	67.881	Anolis_carolinensis
ENSDORG00000026656	Rpusd1	100	86.218	ENSANAG00000024709	RPUSD1	100	85.897	Aotus_nancymaae
ENSDORG00000026656	Rpusd1	98	59.609	ENSACLG00000013692	rpusd1	98	57.980	Astatotilapia_calliptera
ENSDORG00000026656	Rpusd1	99	60.333	ENSAMXG00000019802	rpusd1	100	59.539	Astyanax_mexicanus
ENSDORG00000026656	Rpusd1	100	87.338	ENSBTAG00000000179	RPUSD1	100	86.688	Bos_taurus
ENSDORG00000026656	Rpusd1	100	85.577	ENSCJAG00000012253	RPUSD1	100	84.936	Callithrix_jacchus
ENSDORG00000026656	Rpusd1	100	86.139	ENSCAFG00000019614	RPUSD1	100	84.818	Canis_familiaris
ENSDORG00000026656	Rpusd1	100	86.139	ENSCAFG00020008891	RPUSD1	100	84.818	Canis_lupus_dingo
ENSDORG00000026656	Rpusd1	100	87.338	ENSCHIG00000012872	RPUSD1	100	86.364	Capra_hircus
ENSDORG00000026656	Rpusd1	100	88.449	ENSTSYG00000036934	RPUSD1	100	87.789	Carlito_syrichta
ENSDORG00000026656	Rpusd1	100	88.562	ENSCAPG00000014219	RPUSD1	100	88.235	Cavia_aperea
ENSDORG00000026656	Rpusd1	100	88.562	ENSCPOG00000034604	RPUSD1	100	88.235	Cavia_porcellus
ENSDORG00000026656	Rpusd1	100	86.218	ENSCCAG00000034385	RPUSD1	100	85.897	Cebus_capucinus
ENSDORG00000026656	Rpusd1	100	84.295	ENSCATG00000042983	RPUSD1	100	83.974	Cercocebus_atys
ENSDORG00000026656	Rpusd1	100	87.582	ENSCLAG00000013966	RPUSD1	100	86.601	Chinchilla_lanigera
ENSDORG00000026656	Rpusd1	100	84.615	ENSCSAG00000012121	RPUSD1	100	84.295	Chlorocebus_sabaeus
ENSDORG00000026656	Rpusd1	99	65.574	ENSCPBG00000021101	RPUSD1	99	65.132	Chrysemys_picta_bellii
ENSDORG00000026656	Rpusd1	92	88.256	ENSCANG00000028576	RPUSD1	93	91.985	Colobus_angolensis_palliatus
ENSDORG00000026656	Rpusd1	100	87.789	ENSCGRG00001014253	Rpusd1	100	87.789	Cricetulus_griseus_chok1gshd
ENSDORG00000026656	Rpusd1	100	87.789	ENSCGRG00000017995	Rpusd1	100	87.789	Cricetulus_griseus_crigri
ENSDORG00000026656	Rpusd1	99	56.766	ENSCSEG00000018512	rpusd1	100	56.436	Cynoglossus_semilaevis
ENSDORG00000026656	Rpusd1	98	57.000	ENSCVAG00000022746	rpusd1	98	56.333	Cyprinodon_variegatus
ENSDORG00000026656	Rpusd1	99	61.462	ENSDARG00000060192	rpusd1	100	61.000	Danio_rerio
ENSDORG00000026656	Rpusd1	100	82.692	ENSDNOG00000003721	RPUSD1	100	83.766	Dasypus_novemcinctus
ENSDORG00000026656	Rpusd1	99	46.519	ENSEBUG00000008767	rpusd1	94	46.519	Eptatretus_burgeri
ENSDORG00000026656	Rpusd1	100	85.127	ENSEASG00005018421	RPUSD1	76	85.127	Equus_asinus_asinus
ENSDORG00000026656	Rpusd1	84	60.236	ENSELUG00000014307	rpusd1	88	53.115	Esox_lucius
ENSDORG00000026656	Rpusd1	100	85.809	ENSFCAG00000010359	RPUSD1	100	84.158	Felis_catus
ENSDORG00000026656	Rpusd1	99	67.763	ENSFALG00000003211	RPUSD1	100	65.894	Ficedula_albicollis
ENSDORG00000026656	Rpusd1	100	87.908	ENSFDAG00000013398	RPUSD1	100	86.928	Fukomys_damarensis
ENSDORG00000026656	Rpusd1	98	56.106	ENSFHEG00000004736	rpusd1	98	56.106	Fundulus_heteroclitus
ENSDORG00000026656	Rpusd1	83	63.241	ENSGMOG00000010756	rpusd1	81	63.241	Gadus_morhua
ENSDORG00000026656	Rpusd1	99	64.935	ENSGALG00000005315	RPUSD1	100	63.934	Gallus_gallus
ENSDORG00000026656	Rpusd1	98	57.667	ENSGAFG00000009886	rpusd1	98	57.333	Gambusia_affinis
ENSDORG00000026656	Rpusd1	83	65.339	ENSGACG00000014276	rpusd1	97	57.426	Gasterosteus_aculeatus
ENSDORG00000026656	Rpusd1	99	65.461	ENSGAGG00000004181	RPUSD1	99	64.803	Gopherus_agassizii
ENSDORG00000026656	Rpusd1	100	83.333	ENSGGOG00000013997	RPUSD1	100	83.013	Gorilla_gorilla
ENSDORG00000026656	Rpusd1	98	59.283	ENSHBUG00000023728	rpusd1	98	57.655	Haplochromis_burtoni
ENSDORG00000026656	Rpusd1	100	87.908	ENSHGLG00000002595	RPUSD1	100	87.582	Heterocephalus_glaber_female
ENSDORG00000026656	Rpusd1	100	87.908	ENSHGLG00100014303	RPUSD1	100	87.582	Heterocephalus_glaber_male
ENSDORG00000026656	Rpusd1	98	58.746	ENSHCOG00000002390	rpusd1	99	58.054	Hippocampus_comes
ENSDORG00000026656	Rpusd1	99	59.736	ENSIPUG00000001570	rpusd1	99	59.736	Ictalurus_punctatus
ENSDORG00000026656	Rpusd1	100	90.850	ENSSTOG00000004276	RPUSD1	100	90.196	Ictidomys_tridecemlineatus
ENSDORG00000026656	Rpusd1	100	90.132	ENSJJAG00000015696	Rpusd1	100	89.869	Jaculus_jaculus
ENSDORG00000026656	Rpusd1	98	56.333	ENSKMAG00000017287	rpusd1	98	56.333	Kryptolebias_marmoratus
ENSDORG00000026656	Rpusd1	98	57.049	ENSLBEG00000013354	RPUSD1	98	57.049	Labrus_bergylta
ENSDORG00000026656	Rpusd1	98	57.049	ENSLBEG00000022502	rpusd1	98	57.049	Labrus_bergylta
ENSDORG00000026656	Rpusd1	99	62.583	ENSLACG00000008869	RPUSD1	99	62.583	Latimeria_chalumnae
ENSDORG00000026656	Rpusd1	71	73.611	ENSLOCG00000005682	rpusd1	99	73.611	Lepisosteus_oculatus
ENSDORG00000026656	Rpusd1	100	83.498	ENSLAFG00000002115	RPUSD1	100	82.838	Loxodonta_africana
ENSDORG00000026656	Rpusd1	100	84.936	ENSMFAG00000003961	RPUSD1	100	84.615	Macaca_fascicularis
ENSDORG00000026656	Rpusd1	100	84.936	ENSMMUG00000000842	RPUSD1	100	84.615	Macaca_mulatta
ENSDORG00000026656	Rpusd1	100	84.936	ENSMNEG00000042712	RPUSD1	100	84.615	Macaca_nemestrina
ENSDORG00000026656	Rpusd1	100	84.936	ENSMLEG00000030591	RPUSD1	100	84.615	Mandrillus_leucophaeus
ENSDORG00000026656	Rpusd1	98	58.497	ENSMAMG00000004735	rpusd1	98	57.843	Mastacembelus_armatus
ENSDORG00000026656	Rpusd1	98	59.609	ENSMZEG00005003214	rpusd1	98	57.980	Maylandia_zebra
ENSDORG00000026656	Rpusd1	97	64.000	ENSMGAG00000005447	RPUSD1	100	63.455	Meleagris_gallopavo
ENSDORG00000026656	Rpusd1	86	81.203	ENSMAUG00000019998	Rpusd1	100	81.203	Mesocricetus_auratus
ENSDORG00000026656	Rpusd1	100	88.925	ENSMICG00000017561	RPUSD1	100	88.925	Microcebus_murinus
ENSDORG00000026656	Rpusd1	100	86.601	ENSMOCG00000014082	Rpusd1	100	86.928	Microtus_ochrogaster
ENSDORG00000026656	Rpusd1	81	65.306	ENSMMOG00000012569	rpusd1	99	56.579	Mola_mola
ENSDORG00000026656	Rpusd1	100	69.677	ENSMODG00000016882	RPUSD1	100	68.932	Monodelphis_domestica
ENSDORG00000026656	Rpusd1	98	56.863	ENSMALG00000017818	rpusd1	98	57.516	Monopterus_albus
ENSDORG00000026656	Rpusd1	100	88.889	MGP_CAROLIEiJ_G0021244	Rpusd1	100	89.216	Mus_caroli
ENSDORG00000026656	Rpusd1	100	88.562	ENSMUSG00000041199	Rpusd1	100	88.889	Mus_musculus
ENSDORG00000026656	Rpusd1	100	87.013	MGP_PahariEiJ_G0023562	Rpusd1	100	86.364	Mus_pahari
ENSDORG00000026656	Rpusd1	100	88.562	MGP_SPRETEiJ_G0022155	Rpusd1	100	88.889	Mus_spretus
ENSDORG00000026656	Rpusd1	100	85.479	ENSMPUG00000015897	RPUSD1	100	84.818	Mustela_putorius_furo
ENSDORG00000026656	Rpusd1	100	84.615	ENSMLUG00000001089	RPUSD1	100	83.974	Myotis_lucifugus
ENSDORG00000026656	Rpusd1	100	87.908	ENSNGAG00000003595	Rpusd1	100	88.235	Nannospalax_galili
ENSDORG00000026656	Rpusd1	98	58.446	ENSNBRG00000006457	rpusd1	98	58.446	Neolamprologus_brichardi
ENSDORG00000026656	Rpusd1	55	80.000	ENSNLEG00000008424	-	100	80.000	Nomascus_leucogenys
ENSDORG00000026656	Rpusd1	100	71.287	ENSMEUG00000016049	RPUSD1	100	71.287	Notamacropus_eugenii
ENSDORG00000026656	Rpusd1	99	81.395	ENSOPRG00000008340	RPUSD1	99	80.399	Ochotona_princeps
ENSDORG00000026656	Rpusd1	100	85.621	ENSODEG00000016945	RPUSD1	100	84.967	Octodon_degus
ENSDORG00000026656	Rpusd1	98	58.632	ENSONIG00000015672	rpusd1	99	57.003	Oreochromis_niloticus
ENSDORG00000026656	Rpusd1	99	58.609	ENSORLG00000013009	rpusd1	99	58.609	Oryzias_latipes
ENSDORG00000026656	Rpusd1	99	58.278	ENSORLG00020010382	rpusd1	99	58.278	Oryzias_latipes_hni
ENSDORG00000026656	Rpusd1	99	57.616	ENSORLG00015021354	rpusd1	99	57.616	Oryzias_latipes_hsok
ENSDORG00000026656	Rpusd1	98	57.912	ENSOMEG00000021426	rpusd1	98	57.912	Oryzias_melastigma
ENSDORG00000026656	Rpusd1	100	88.782	ENSOGAG00000003795	RPUSD1	100	88.462	Otolemur_garnettii
ENSDORG00000026656	Rpusd1	100	87.013	ENSOARG00000014254	RPUSD1	100	86.364	Ovis_aries
ENSDORG00000026656	Rpusd1	100	83.333	ENSPPAG00000034797	RPUSD1	100	83.013	Pan_paniscus
ENSDORG00000026656	Rpusd1	100	85.809	ENSPPRG00000012389	RPUSD1	100	84.158	Panthera_pardus
ENSDORG00000026656	Rpusd1	100	85.479	ENSPTIG00000008545	RPUSD1	92	83.828	Panthera_tigris_altaica
ENSDORG00000026656	Rpusd1	100	83.333	ENSPTRG00000007565	RPUSD1	100	83.013	Pan_troglodytes
ENSDORG00000026656	Rpusd1	100	84.295	ENSPANG00000024401	RPUSD1	100	83.974	Papio_anubis
ENSDORG00000026656	Rpusd1	99	60.526	ENSPKIG00000018890	rpusd1	91	59.539	Paramormyrops_kingsleyae
ENSDORG00000026656	Rpusd1	99	65.902	ENSPSIG00000013945	RPUSD1	100	65.574	Pelodiscus_sinensis
ENSDORG00000026656	Rpusd1	98	57.432	ENSPMGG00000014950	rpusd1	99	56.856	Periophthalmus_magnuspinnatus
ENSDORG00000026656	Rpusd1	100	86.601	ENSPEMG00000000497	Rpusd1	100	87.255	Peromyscus_maniculatus_bairdii
ENSDORG00000026656	Rpusd1	85	57.915	ENSPMAG00000001563	rpusd1	84	57.915	Petromyzon_marinus
ENSDORG00000026656	Rpusd1	100	70.164	ENSPCIG00000021216	-	94	69.836	Phascolarctos_cinereus
ENSDORG00000026656	Rpusd1	98	57.756	ENSPFOG00000007946	rpusd1	98	57.191	Poecilia_formosa
ENSDORG00000026656	Rpusd1	98	57.756	ENSPLAG00000011925	rpusd1	98	57.191	Poecilia_latipinna
ENSDORG00000026656	Rpusd1	98	57.426	ENSPMEG00000002910	rpusd1	98	56.856	Poecilia_mexicana
ENSDORG00000026656	Rpusd1	98	58.667	ENSPREG00000019851	rpusd1	98	58.000	Poecilia_reticulata
ENSDORG00000026656	Rpusd1	100	70.297	ENSPCAG00000002258	RPUSD1	100	69.967	Procavia_capensis
ENSDORG00000026656	Rpusd1	100	88.782	ENSPCOG00000022582	RPUSD1	100	88.462	Propithecus_coquereli
ENSDORG00000026656	Rpusd1	100	83.654	ENSPVAG00000013104	RPUSD1	100	83.013	Pteropus_vampyrus
ENSDORG00000026656	Rpusd1	98	59.283	ENSPNYG00000024076	rpusd1	98	58.446	Pundamilia_nyererei
ENSDORG00000026656	Rpusd1	99	58.333	ENSPNAG00000013806	rpusd1	100	58.000	Pygocentrus_nattereri
ENSDORG00000026656	Rpusd1	100	88.235	ENSRNOG00000023639	Rpusd1	100	88.562	Rattus_norvegicus
ENSDORG00000026656	Rpusd1	100	84.295	ENSRBIG00000030238	RPUSD1	100	84.295	Rhinopithecus_bieti
ENSDORG00000026656	Rpusd1	100	84.295	ENSRROG00000036663	RPUSD1	100	84.295	Rhinopithecus_roxellana
ENSDORG00000026656	Rpusd1	100	87.789	ENSSBOG00000033063	RPUSD1	100	87.789	Saimiri_boliviensis_boliviensis
ENSDORG00000026656	Rpusd1	100	68.710	ENSSHAG00000013500	RPUSD1	100	69.180	Sarcophilus_harrisii
ENSDORG00000026656	Rpusd1	99	61.794	ENSSFOG00015014394	rpusd1	99	61.589	Scleropages_formosus
ENSDORG00000026656	Rpusd1	98	56.721	ENSSMAG00000008045	rpusd1	91	56.721	Scophthalmus_maximus
ENSDORG00000026656	Rpusd1	83	67.984	ENSSDUG00000001829	rpusd1	95	59.344	Seriola_dumerili
ENSDORG00000026656	Rpusd1	83	67.984	ENSSLDG00000020853	rpusd1	95	59.344	Seriola_lalandi_dorsalis
ENSDORG00000026656	Rpusd1	55	89.820	ENSSARG00000011187	-	100	89.820	Sorex_araneus
ENSDORG00000026656	Rpusd1	62	53.927	ENSSPUG00000005119	-	99	53.927	Sphenodon_punctatus
ENSDORG00000026656	Rpusd1	98	57.705	ENSSPAG00000012708	rpusd1	98	57.705	Stegastes_partitus
ENSDORG00000026656	Rpusd1	100	84.936	ENSSSCG00000008000	RPUSD1	99	89.883	Sus_scrofa
ENSDORG00000026656	Rpusd1	84	73.725	ENSTGUG00000015375	RPUSD1	100	73.725	Taeniopygia_guttata
ENSDORG00000026656	Rpusd1	98	57.190	ENSTRUG00000003041	rpusd1	98	55.882	Takifugu_rubripes
ENSDORG00000026656	Rpusd1	98	55.219	ENSTNIG00000002660	rpusd1	99	55.219	Tetraodon_nigroviridis
ENSDORG00000026656	Rpusd1	100	84.295	ENSTTRG00000010167	RPUSD1	100	83.974	Tursiops_truncatus
ENSDORG00000026656	Rpusd1	100	86.469	ENSUAMG00000012736	RPUSD1	100	84.818	Ursus_americanus
ENSDORG00000026656	Rpusd1	100	86.469	ENSUMAG00000021174	RPUSD1	100	84.818	Ursus_maritimus
ENSDORG00000026656	Rpusd1	100	85.149	ENSVVUG00000012357	RPUSD1	100	83.828	Vulpes_vulpes
ENSDORG00000026656	Rpusd1	100	61.842	ENSXETG00000007184	rpusd1	100	62.171	Xenopus_tropicalis
ENSDORG00000026656	Rpusd1	98	57.000	ENSXCOG00000017930	rpusd1	96	60.156	Xiphophorus_couchianus
ENSDORG00000026656	Rpusd1	98	58.000	ENSXMAG00000024084	rpusd1	98	57.667	Xiphophorus_maculatus