EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000026827 (Gene tree)
Gene ID: 105981255
Gene Symbol: Rpusd3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 3352 bases
Position: chrKN672358.1:3434039-3437390
Accession: 105981255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000022258	PseudoU_synth_2	PF00849.22	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000029956	-	864	XM_013010347	ENSDORP00000022258	287 (aa)	XP_012865801	UPI000BAD05F0

Gene Model

Click here to download ENSDORG00000026827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000026827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000026827	Rpusd3	92	30.824	ENSDORG00000016717	Rpusd4	68	30.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000026827	Rpusd3	92	78.731	ENSG00000156990	RPUSD3	97	64.565	Homo_sapiens
ENSDORG00000026827	Rpusd3	92	75.000	ENSAMEG00000016227	RPUSD3	74	75.000	Ailuropoda_melanoleuca
ENSDORG00000026827	Rpusd3	92	51.852	ENSACAG00000009836	RPUSD3	75	51.852	Anolis_carolinensis
ENSDORG00000026827	Rpusd3	55	70.807	ENSANAG00000038118	-	75	70.807	Aotus_nancymaae
ENSDORG00000026827	Rpusd3	67	52.174	ENSANAG00000007127	-	76	50.000	Aotus_nancymaae
ENSDORG00000026827	Rpusd3	55	72.500	ENSANAG00000019945	-	62	72.500	Aotus_nancymaae
ENSDORG00000026827	Rpusd3	92	75.000	ENSBTAG00000007968	RPUSD3	76	75.000	Bos_taurus
ENSDORG00000026827	Rpusd3	92	75.746	ENSCAFG00000029733	RPUSD3	74	75.746	Canis_familiaris
ENSDORG00000026827	Rpusd3	92	75.746	ENSCAFG00020008582	RPUSD3	79	75.746	Canis_lupus_dingo
ENSDORG00000026827	Rpusd3	99	63.609	ENSCHIG00000026027	RPUSD3	99	63.609	Capra_hircus
ENSDORG00000026827	Rpusd3	94	73.455	ENSTSYG00000009994	RPUSD3	76	73.455	Carlito_syrichta
ENSDORG00000026827	Rpusd3	92	73.208	ENSCAPG00000017559	RPUSD3	98	73.208	Cavia_aperea
ENSDORG00000026827	Rpusd3	92	72.830	ENSCPOG00000037956	RPUSD3	74	72.059	Cavia_porcellus
ENSDORG00000026827	Rpusd3	92	77.358	ENSCCAG00000029530	RPUSD3	81	72.101	Cebus_capucinus
ENSDORG00000026827	Rpusd3	92	78.358	ENSCATG00000036939	RPUSD3	81	73.118	Cercocebus_atys
ENSDORG00000026827	Rpusd3	92	77.736	ENSCSAG00000010506	RPUSD3	74	77.736	Chlorocebus_sabaeus
ENSDORG00000026827	Rpusd3	56	77.885	ENSCHOG00000010151	-	62	77.885	Choloepus_hoffmanni
ENSDORG00000026827	Rpusd3	91	53.435	ENSCPBG00000008825	RPUSD3	96	55.472	Chrysemys_picta_bellii
ENSDORG00000026827	Rpusd3	92	78.358	ENSCANG00000040711	RPUSD3	97	64.565	Colobus_angolensis_palliatus
ENSDORG00000026827	Rpusd3	92	73.208	ENSCGRG00001004923	Rpusd3	72	73.208	Cricetulus_griseus_chok1gshd
ENSDORG00000026827	Rpusd3	92	73.208	ENSCGRG00000018315	Rpusd3	76	73.208	Cricetulus_griseus_crigri
ENSDORG00000026827	Rpusd3	92	74.340	ENSDNOG00000039160	RPUSD3	69	74.340	Dasypus_novemcinctus
ENSDORG00000026827	Rpusd3	92	70.896	ENSETEG00000006538	RPUSD3	74	70.896	Echinops_telfairi
ENSDORG00000026827	Rpusd3	69	38.614	ENSEBUG00000015605	RPUSD3	62	38.614	Eptatretus_burgeri
ENSDORG00000026827	Rpusd3	92	77.239	ENSEASG00005014160	RPUSD3	72	77.239	Equus_asinus_asinus
ENSDORG00000026827	Rpusd3	92	77.239	ENSECAG00000019988	RPUSD3	72	77.239	Equus_caballus
ENSDORG00000026827	Rpusd3	76	70.507	ENSEEUG00000007353	RPUSD3	60	70.507	Erinaceus_europaeus
ENSDORG00000026827	Rpusd3	92	76.493	ENSFCAG00000014199	RPUSD3	97	62.575	Felis_catus
ENSDORG00000026827	Rpusd3	92	50.370	ENSFALG00000012968	RPUSD3	95	50.741	Ficedula_albicollis
ENSDORG00000026827	Rpusd3	92	75.849	ENSFDAG00000008350	RPUSD3	80	75.849	Fukomys_damarensis
ENSDORG00000026827	Rpusd3	99	50.479	ENSGAGG00000007493	RPUSD3	96	50.479	Gopherus_agassizii
ENSDORG00000026827	Rpusd3	92	78.731	ENSGGOG00000013120	RPUSD3	97	64.264	Gorilla_gorilla
ENSDORG00000026827	Rpusd3	94	74.182	ENSHGLG00000011722	RPUSD3	68	74.182	Heterocephalus_glaber_female
ENSDORG00000026827	Rpusd3	94	74.182	ENSHGLG00100016038	RPUSD3	68	74.182	Heterocephalus_glaber_male
ENSDORG00000026827	Rpusd3	92	75.000	ENSSTOG00000002125	RPUSD3	74	75.000	Ictidomys_tridecemlineatus
ENSDORG00000026827	Rpusd3	92	72.659	ENSJJAG00000012679	Rpusd3	76	72.659	Jaculus_jaculus
ENSDORG00000026827	Rpusd3	92	75.746	ENSLAFG00000017501	RPUSD3	76	75.746	Loxodonta_africana
ENSDORG00000026827	Rpusd3	92	77.612	ENSMFAG00000032407	RPUSD3	97	63.363	Macaca_fascicularis
ENSDORG00000026827	Rpusd3	92	78.113	ENSMMUG00000010628	RPUSD3	81	78.113	Macaca_mulatta
ENSDORG00000026827	Rpusd3	92	77.612	ENSMNEG00000040308	RPUSD3	81	72.401	Macaca_nemestrina
ENSDORG00000026827	Rpusd3	92	78.358	ENSMLEG00000033940	RPUSD3	81	73.118	Mandrillus_leucophaeus
ENSDORG00000026827	Rpusd3	91	74.525	ENSMAUG00000015473	Rpusd3	75	74.525	Mesocricetus_auratus
ENSDORG00000026827	Rpusd3	92	78.491	ENSMICG00000002315	RPUSD3	76	78.491	Microcebus_murinus
ENSDORG00000026827	Rpusd3	92	71.910	ENSMOCG00000022613	Rpusd3	76	71.910	Microtus_ochrogaster
ENSDORG00000026827	Rpusd3	92	60.985	ENSMODG00000005210	RPUSD3	68	60.985	Monodelphis_domestica
ENSDORG00000026827	Rpusd3	92	73.034	MGP_CAROLIEiJ_G0028725	Rpusd3	76	73.034	Mus_caroli
ENSDORG00000026827	Rpusd3	92	74.532	ENSMUSG00000051169	Rpusd3	76	74.532	Mus_musculus
ENSDORG00000026827	Rpusd3	92	73.034	MGP_PahariEiJ_G0022476	Rpusd3	76	73.034	Mus_pahari
ENSDORG00000026827	Rpusd3	92	74.157	MGP_SPRETEiJ_G0029753	Rpusd3	76	74.157	Mus_spretus
ENSDORG00000026827	Rpusd3	92	75.000	ENSMPUG00000017132	RPUSD3	74	75.000	Mustela_putorius_furo
ENSDORG00000026827	Rpusd3	92	75.849	ENSMLUG00000006135	RPUSD3	75	75.849	Myotis_lucifugus
ENSDORG00000026827	Rpusd3	92	73.208	ENSNGAG00000023704	Rpusd3	78	73.208	Nannospalax_galili
ENSDORG00000026827	Rpusd3	92	61.940	ENSNLEG00000004214	RPUSD3	72	74.534	Nomascus_leucogenys
ENSDORG00000026827	Rpusd3	92	61.887	ENSMEUG00000013098	-	100	61.887	Notamacropus_eugenii
ENSDORG00000026827	Rpusd3	92	61.887	ENSOPRG00000002300	RPUSD3	74	61.887	Ochotona_princeps
ENSDORG00000026827	Rpusd3	99	70.934	ENSODEG00000018137	RPUSD3	99	70.934	Octodon_degus
ENSDORG00000026827	Rpusd3	91	45.627	ENSOANG00000012081	-	90	45.627	Ornithorhynchus_anatinus
ENSDORG00000026827	Rpusd3	92	63.235	ENSOCUG00000027885	RPUSD3	77	63.235	Oryctolagus_cuniculus
ENSDORG00000026827	Rpusd3	92	77.239	ENSOGAG00000012592	RPUSD3	83	77.239	Otolemur_garnettii
ENSDORG00000026827	Rpusd3	92	76.119	ENSOARG00000005928	RPUSD3	74	76.119	Ovis_aries
ENSDORG00000026827	Rpusd3	92	77.612	ENSPPAG00000038083	RPUSD3	97	63.363	Pan_paniscus
ENSDORG00000026827	Rpusd3	92	77.239	ENSPPRG00000024433	RPUSD3	74	77.239	Panthera_pardus
ENSDORG00000026827	Rpusd3	92	77.612	ENSPTIG00000006828	RPUSD3	97	63.473	Panthera_tigris_altaica
ENSDORG00000026827	Rpusd3	92	77.612	ENSPTRG00000051760	RPUSD3	97	63.363	Pan_troglodytes
ENSDORG00000026827	Rpusd3	92	78.358	ENSPANG00000023885	RPUSD3	81	73.118	Papio_anubis
ENSDORG00000026827	Rpusd3	92	73.585	ENSPEMG00000017245	Rpusd3	76	73.585	Peromyscus_maniculatus_bairdii
ENSDORG00000026827	Rpusd3	92	62.547	ENSPCIG00000021901	RPUSD3	76	62.547	Phascolarctos_cinereus
ENSDORG00000026827	Rpusd3	92	79.104	ENSPPYG00000013676	RPUSD3	74	79.245	Pongo_abelii
ENSDORG00000026827	Rpusd3	55	71.875	ENSPCAG00000013731	-	53	71.875	Procavia_capensis
ENSDORG00000026827	Rpusd3	92	80.377	ENSPCOG00000018314	RPUSD3	97	65.559	Propithecus_coquereli
ENSDORG00000026827	Rpusd3	92	75.000	ENSPVAG00000011107	RPUSD3	74	75.000	Pteropus_vampyrus
ENSDORG00000026827	Rpusd3	93	69.259	ENSRNOG00000009084	Rpusd3	83	69.259	Rattus_norvegicus
ENSDORG00000026827	Rpusd3	92	77.612	ENSRBIG00000041230	RPUSD3	97	63.664	Rhinopithecus_bieti
ENSDORG00000026827	Rpusd3	92	77.612	ENSRROG00000043328	RPUSD3	74	77.612	Rhinopithecus_roxellana
ENSDORG00000026827	Rpusd3	92	76.226	ENSSBOG00000036106	RPUSD3	81	71.014	Saimiri_boliviensis_boliviensis
ENSDORG00000026827	Rpusd3	92	60.227	ENSSHAG00000015536	RPUSD3	84	60.227	Sarcophilus_harrisii
ENSDORG00000026827	Rpusd3	92	76.604	ENSSSCG00000011555	RPUSD3	74	76.604	Sus_scrofa
ENSDORG00000026827	Rpusd3	82	50.000	ENSTGUG00000008744	RPUSD3	92	49.550	Taeniopygia_guttata
ENSDORG00000026827	Rpusd3	71	73.077	ENSTBEG00000000176	RPUSD3	69	73.077	Tupaia_belangeri
ENSDORG00000026827	Rpusd3	92	76.119	ENSTTRG00000007544	RPUSD3	74	76.119	Tursiops_truncatus
ENSDORG00000026827	Rpusd3	92	75.373	ENSUAMG00000011354	RPUSD3	81	75.373	Ursus_americanus
ENSDORG00000026827	Rpusd3	92	75.373	ENSUMAG00000018830	RPUSD3	74	75.373	Ursus_maritimus
ENSDORG00000026827	Rpusd3	92	75.746	ENSVVUG00000023735	RPUSD3	76	75.746	Vulpes_vulpes
ENSDORG00000026827	Rpusd3	92	47.744	ENSXETG00000023546	rpusd3	92	47.744	Xenopus_tropicalis