EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000027169 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 378 bases
Position: chrKN672507.1:1122969-1123346
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000021463	LSM	PF01423.22	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000031673	-	327	-	ENSDORP00000021463	108 (aa)	-	UPI000BAD1579

Gene Model

Click here to download ENSDORG00000027169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000027169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000027169	-	100	66.667	ENSDORG00000027706	-	100	66.667
ENSDORG00000027169	-	93	77.064	ENSDORG00000002800	-	99	77.064

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000027169	-	100	74.603	ENSG00000100028	SNRPD3	100	74.603	Homo_sapiens
ENSDORG00000027169	-	100	70.079	ENSAPOG00000007512	snrpd3l	100	70.866	Acanthochromis_polyacanthus
ENSDORG00000027169	-	100	74.603	ENSAMEG00000013935	SNRPD3	100	74.603	Ailuropoda_melanoleuca
ENSDORG00000027169	-	100	70.079	ENSACIG00000008871	snrpd3l	100	70.866	Amphilophus_citrinellus
ENSDORG00000027169	-	81	71.698	ENSAOCG00000016759	-	98	71.698	Amphiprion_ocellaris
ENSDORG00000027169	-	100	70.079	ENSAOCG00000022442	-	100	70.866	Amphiprion_ocellaris
ENSDORG00000027169	-	100	70.079	ENSAOCG00000016743	snrpd3l	100	70.866	Amphiprion_ocellaris
ENSDORG00000027169	-	100	70.079	ENSAOCG00000008497	SNRPD3	100	70.866	Amphiprion_ocellaris
ENSDORG00000027169	-	81	71.698	ENSAPEG00000006260	-	98	71.698	Amphiprion_percula
ENSDORG00000027169	-	100	70.079	ENSAPEG00000006273	snrpd3l	100	70.866	Amphiprion_percula
ENSDORG00000027169	-	100	70.079	ENSATEG00000020556	snrpd3l	91	70.866	Anabas_testudineus
ENSDORG00000027169	-	100	74.603	ENSAPLG00000008670	SNRPD3	100	74.603	Anas_platyrhynchos
ENSDORG00000027169	-	100	74.603	ENSANAG00000026106	SNRPD3	100	74.603	Aotus_nancymaae
ENSDORG00000027169	-	100	70.079	ENSACLG00000021295	snrpd3l	100	70.866	Astatotilapia_calliptera
ENSDORG00000027169	-	100	67.188	ENSAMXG00000038984	snrpd3l	100	69.531	Astyanax_mexicanus
ENSDORG00000027169	-	100	74.603	ENSBTAG00000021262	SNRPD3	100	74.603	Bos_taurus
ENSDORG00000027169	-	89	50.000	WBGene00004914	snr-1	57	58.974	Caenorhabditis_elegans
ENSDORG00000027169	-	100	74.603	ENSCJAG00000009630	SNRPD3	100	74.603	Callithrix_jacchus
ENSDORG00000027169	-	100	74.603	ENSCAFG00000013864	-	100	74.603	Canis_familiaris
ENSDORG00000027169	-	100	74.603	ENSCAFG00000017258	-	100	74.603	Canis_familiaris
ENSDORG00000027169	-	100	74.603	ENSCAFG00020007165	-	100	74.603	Canis_lupus_dingo
ENSDORG00000027169	-	100	74.603	ENSCHIG00000000057	SNRPD3	100	74.603	Capra_hircus
ENSDORG00000027169	-	100	74.603	ENSTSYG00000007649	SNRPD3	100	74.603	Carlito_syrichta
ENSDORG00000027169	-	100	74.603	ENSCAPG00000016432	-	100	74.603	Cavia_aperea
ENSDORG00000027169	-	100	74.603	ENSCPOG00000033102	-	100	74.603	Cavia_porcellus
ENSDORG00000027169	-	100	74.603	ENSCCAG00000035006	SNRPD3	100	74.603	Cebus_capucinus
ENSDORG00000027169	-	100	74.603	ENSCATG00000038878	SNRPD3	100	74.603	Cercocebus_atys
ENSDORG00000027169	-	100	74.603	ENSCLAG00000011403	SNRPD3	100	74.603	Chinchilla_lanigera
ENSDORG00000027169	-	100	74.603	ENSCSAG00000010694	SNRPD3	100	74.603	Chlorocebus_sabaeus
ENSDORG00000027169	-	100	74.603	ENSCPBG00000002065	SNRPD3	100	74.603	Chrysemys_picta_bellii
ENSDORG00000027169	-	82	59.223	ENSCSAVG00000004708	-	80	59.223	Ciona_savignyi
ENSDORG00000027169	-	100	74.603	ENSCANG00000032106	SNRPD3	100	74.603	Colobus_angolensis_palliatus
ENSDORG00000027169	-	100	74.603	ENSCGRG00001021990	Snrpd3	100	74.603	Cricetulus_griseus_chok1gshd
ENSDORG00000027169	-	100	74.603	ENSCGRG00000004280	Snrpd3	100	74.603	Cricetulus_griseus_crigri
ENSDORG00000027169	-	100	69.291	ENSCVAG00000001276	snrpd3l	100	73.228	Cyprinodon_variegatus
ENSDORG00000027169	-	100	69.531	ENSDARG00000076283	snrpd3l	100	71.094	Danio_rerio
ENSDORG00000027169	-	100	66.142	ENSDARG00000013800	snrpd3	100	66.929	Danio_rerio
ENSDORG00000027169	-	100	74.603	ENSDNOG00000047424	-	100	74.603	Dasypus_novemcinctus
ENSDORG00000027169	-	96	60.656	ENSDNOG00000042638	-	100	60.656	Dasypus_novemcinctus
ENSDORG00000027169	-	100	69.767	ENSDNOG00000018004	-	100	69.767	Dasypus_novemcinctus
ENSDORG00000027169	-	81	63.208	FBgn0023167	SmD3	71	61.682	Drosophila_melanogaster
ENSDORG00000027169	-	100	74.603	ENSEASG00005000273	SNRPD3	100	74.603	Equus_asinus_asinus
ENSDORG00000027169	-	100	74.603	ENSECAG00000023316	SNRPD3	100	74.603	Equus_caballus
ENSDORG00000027169	-	100	71.429	ENSEEUG00000015518	SNRPD3	100	73.016	Erinaceus_europaeus
ENSDORG00000027169	-	100	67.717	ENSELUG00000001854	snrpd3	100	68.504	Esox_lucius
ENSDORG00000027169	-	100	69.291	ENSELUG00000010092	snrpd3l	100	73.228	Esox_lucius
ENSDORG00000027169	-	100	74.603	ENSFCAG00000001512	SNRPD3	100	74.603	Felis_catus
ENSDORG00000027169	-	100	74.603	ENSFALG00000007303	SNRPD3	100	74.603	Ficedula_albicollis
ENSDORG00000027169	-	100	74.603	ENSFDAG00000010772	SNRPD3	100	74.603	Fukomys_damarensis
ENSDORG00000027169	-	100	69.291	ENSFHEG00000010754	snrpd3l	100	73.228	Fundulus_heteroclitus
ENSDORG00000027169	-	100	69.531	ENSGMOG00000008469	snrpd3l	100	70.312	Gadus_morhua
ENSDORG00000027169	-	100	74.603	ENSGALG00000006596	SNRPD3	100	74.603	Gallus_gallus
ENSDORG00000027169	-	81	71.698	ENSGAFG00000006661	snrpd3l	82	71.698	Gambusia_affinis
ENSDORG00000027169	-	100	69.531	ENSGACG00000017533	snrpd3l	100	70.312	Gasterosteus_aculeatus
ENSDORG00000027169	-	100	74.603	ENSGAGG00000023325	SNRPD3	100	74.603	Gopherus_agassizii
ENSDORG00000027169	-	100	74.603	ENSGGOG00000015640	SNRPD3	100	74.603	Gorilla_gorilla
ENSDORG00000027169	-	100	70.079	ENSHBUG00000001332	snrpd3l	100	70.866	Haplochromis_burtoni
ENSDORG00000027169	-	100	74.603	ENSHGLG00000016496	SNRPD3	100	74.603	Heterocephalus_glaber_female
ENSDORG00000027169	-	99	74.400	ENSHGLG00000009844	-	99	74.400	Heterocephalus_glaber_female
ENSDORG00000027169	-	100	74.603	ENSHGLG00100019304	SNRPD3	100	74.603	Heterocephalus_glaber_male
ENSDORG00000027169	-	99	74.400	ENSHGLG00100011326	-	99	74.400	Heterocephalus_glaber_male
ENSDORG00000027169	-	100	70.079	ENSHCOG00000014396	snrpd3l	100	70.866	Hippocampus_comes
ENSDORG00000027169	-	100	69.531	ENSIPUG00000003083	snrpd3	100	71.094	Ictalurus_punctatus
ENSDORG00000027169	-	100	74.603	ENSSTOG00000025674	SNRPD3	100	74.603	Ictidomys_tridecemlineatus
ENSDORG00000027169	-	100	74.603	ENSJJAG00000013303	Snrpd3	100	74.603	Jaculus_jaculus
ENSDORG00000027169	-	100	69.291	ENSKMAG00000012493	snrpd3l	100	73.228	Kryptolebias_marmoratus
ENSDORG00000027169	-	100	70.079	ENSLBEG00000003202	snrpd3l	100	70.866	Labrus_bergylta
ENSDORG00000027169	-	100	74.603	ENSLACG00000015192	SNRPD3	100	74.603	Latimeria_chalumnae
ENSDORG00000027169	-	100	70.079	ENSLOCG00000006978	snrpd3	100	70.866	Lepisosteus_oculatus
ENSDORG00000027169	-	100	74.603	ENSLAFG00000028180	SNRPD3	100	74.603	Loxodonta_africana
ENSDORG00000027169	-	100	74.603	ENSMFAG00000033628	SNRPD3	100	74.603	Macaca_fascicularis
ENSDORG00000027169	-	100	74.603	ENSMMUG00000000264	SNRPD3	100	74.603	Macaca_mulatta
ENSDORG00000027169	-	100	74.603	ENSMNEG00000020857	SNRPD3	100	74.603	Macaca_nemestrina
ENSDORG00000027169	-	100	74.603	ENSMLEG00000037548	SNRPD3	100	74.603	Mandrillus_leucophaeus
ENSDORG00000027169	-	100	70.079	ENSMZEG00005017664	snrpd3l	100	70.866	Maylandia_zebra
ENSDORG00000027169	-	100	74.603	ENSMAUG00000021393	Snrpd3	100	74.603	Mesocricetus_auratus
ENSDORG00000027169	-	100	74.603	ENSMICG00000034782	SNRPD3	100	74.603	Microcebus_murinus
ENSDORG00000027169	-	100	74.603	ENSMOCG00000009361	Snrpd3	100	74.603	Microtus_ochrogaster
ENSDORG00000027169	-	93	67.797	ENSMMOG00000020985	snrpd3l	67	71.698	Mola_mola
ENSDORG00000027169	-	100	74.603	ENSMODG00000004024	SNRPD3	100	74.603	Monodelphis_domestica
ENSDORG00000027169	-	100	70.079	ENSMALG00000013334	snrpd3l	100	70.866	Monopterus_albus
ENSDORG00000027169	-	100	74.603	MGP_CAROLIEiJ_G0015441	Snrpd3	100	74.603	Mus_caroli
ENSDORG00000027169	-	100	74.603	ENSMUSG00000020180	Snrpd3	100	74.603	Mus_musculus
ENSDORG00000027169	-	100	74.603	MGP_PahariEiJ_G0030857	Snrpd3	100	74.603	Mus_pahari
ENSDORG00000027169	-	100	74.603	MGP_SPRETEiJ_G0016254	Snrpd3	100	74.603	Mus_spretus
ENSDORG00000027169	-	100	74.603	ENSMPUG00000002889	SNRPD3	100	74.603	Mustela_putorius_furo
ENSDORG00000027169	-	100	74.603	ENSMLUG00000009838	SNRPD3	100	74.603	Myotis_lucifugus
ENSDORG00000027169	-	100	74.603	ENSNGAG00000010328	Snrpd3	100	74.603	Nannospalax_galili
ENSDORG00000027169	-	100	70.079	ENSNBRG00000020307	snrpd3l	100	70.866	Neolamprologus_brichardi
ENSDORG00000027169	-	100	74.603	ENSNLEG00000035757	SNRPD3	100	74.603	Nomascus_leucogenys
ENSDORG00000027169	-	100	74.603	ENSMEUG00000003772	SNRPD3	100	74.603	Notamacropus_eugenii
ENSDORG00000027169	-	100	74.603	ENSOPRG00000005763	SNRPD3	100	74.603	Ochotona_princeps
ENSDORG00000027169	-	100	73.810	ENSODEG00000019354	-	100	73.810	Octodon_degus
ENSDORG00000027169	-	100	73.600	ENSODEG00000020162	-	100	73.600	Octodon_degus
ENSDORG00000027169	-	100	74.603	ENSODEG00000008064	-	100	74.603	Octodon_degus
ENSDORG00000027169	-	100	70.079	ENSONIG00000003828	snrpd3l	100	70.866	Oreochromis_niloticus
ENSDORG00000027169	-	100	74.603	ENSOANG00000002463	SNRPD3	100	74.603	Ornithorhynchus_anatinus
ENSDORG00000027169	-	100	74.603	ENSOCUG00000004845	SNRPD3	100	74.603	Oryctolagus_cuniculus
ENSDORG00000027169	-	100	70.079	ENSORLG00000010586	snrpd3l	100	70.866	Oryzias_latipes
ENSDORG00000027169	-	100	70.079	ENSORLG00020011769	snrpd3l	100	70.866	Oryzias_latipes_hni
ENSDORG00000027169	-	100	70.079	ENSORLG00015022940	snrpd3l	100	70.866	Oryzias_latipes_hsok
ENSDORG00000027169	-	100	69.291	ENSOMEG00000022734	snrpd3l	100	73.228	Oryzias_melastigma
ENSDORG00000027169	-	100	74.603	ENSOGAG00000012708	SNRPD3	100	74.603	Otolemur_garnettii
ENSDORG00000027169	-	100	74.603	ENSOARG00000013984	SNRPD3	100	74.603	Ovis_aries
ENSDORG00000027169	-	100	74.603	ENSPPAG00000039191	SNRPD3	100	74.603	Pan_paniscus
ENSDORG00000027169	-	100	74.603	ENSPPRG00000001470	SNRPD3	100	74.603	Panthera_pardus
ENSDORG00000027169	-	100	74.603	ENSPTIG00000016610	SNRPD3	100	74.603	Panthera_tigris_altaica
ENSDORG00000027169	-	100	74.603	ENSPTRG00000014176	SNRPD3	100	74.603	Pan_troglodytes
ENSDORG00000027169	-	100	74.603	ENSPANG00000009279	SNRPD3	100	74.603	Papio_anubis
ENSDORG00000027169	-	100	67.717	ENSPKIG00000006412	snrpd3l	100	71.654	Paramormyrops_kingsleyae
ENSDORG00000027169	-	100	73.810	ENSPSIG00000010022	-	100	73.810	Pelodiscus_sinensis
ENSDORG00000027169	-	83	71.296	ENSPMGG00000004486	snrpd3l	88	71.296	Periophthalmus_magnuspinnatus
ENSDORG00000027169	-	100	74.603	ENSPCIG00000010910	SNRPD3	84	74.603	Phascolarctos_cinereus
ENSDORG00000027169	-	100	69.291	ENSPFOG00000019673	snrpd3l	100	73.228	Poecilia_formosa
ENSDORG00000027169	-	100	69.291	ENSPLAG00000023249	snrpd3l	100	73.228	Poecilia_latipinna
ENSDORG00000027169	-	100	69.291	ENSPMEG00000008482	snrpd3l	100	73.228	Poecilia_mexicana
ENSDORG00000027169	-	81	71.698	ENSPREG00000007532	snrpd3l	87	71.698	Poecilia_reticulata
ENSDORG00000027169	-	100	74.603	ENSPPYG00000011648	SNRPD3	100	74.603	Pongo_abelii
ENSDORG00000027169	-	100	74.603	ENSPCAG00000002065	SNRPD3	100	74.603	Procavia_capensis
ENSDORG00000027169	-	100	74.603	ENSPCOG00000011842	SNRPD3	100	74.603	Propithecus_coquereli
ENSDORG00000027169	-	100	73.600	ENSPVAG00000011405	SNRPD3	100	73.600	Pteropus_vampyrus
ENSDORG00000027169	-	100	70.079	ENSPNYG00000013344	snrpd3l	100	70.866	Pundamilia_nyererei
ENSDORG00000027169	-	100	67.188	ENSPNAG00000008683	snrpd3l	100	69.531	Pygocentrus_nattereri
ENSDORG00000027169	-	100	66.929	ENSPNAG00000010547	snrpd3	100	67.717	Pygocentrus_nattereri
ENSDORG00000027169	-	100	74.603	ENSRNOG00000050410	Snrpd3	100	74.603	Rattus_norvegicus
ENSDORG00000027169	-	100	74.603	ENSRBIG00000029017	SNRPD3	100	74.603	Rhinopithecus_bieti
ENSDORG00000027169	-	100	74.603	ENSRROG00000031152	SNRPD3	100	74.603	Rhinopithecus_roxellana
ENSDORG00000027169	-	62	38.158	YLR147C	SMD3	75	38.158	Saccharomyces_cerevisiae
ENSDORG00000027169	-	100	69.291	ENSSFOG00015014180	snrpd3l	100	70.079	Scleropages_formosus
ENSDORG00000027169	-	100	67.717	ENSSFOG00015007002	snrpd3l	100	71.654	Scleropages_formosus
ENSDORG00000027169	-	100	70.079	ENSSMAG00000019307	snrpd3l	100	70.866	Scophthalmus_maximus
ENSDORG00000027169	-	100	70.079	ENSSDUG00000006870	snrpd3l	100	70.866	Seriola_dumerili
ENSDORG00000027169	-	100	70.079	ENSSLDG00000022664	snrpd3l	100	70.866	Seriola_lalandi_dorsalis
ENSDORG00000027169	-	100	74.603	ENSSARG00000002357	SNRPD3	100	74.603	Sorex_araneus
ENSDORG00000027169	-	100	73.810	ENSSPUG00000014285	SNRPD3	100	73.810	Sphenodon_punctatus
ENSDORG00000027169	-	100	74.603	ENSSSCG00000010058	SNRPD3	100	74.603	Sus_scrofa
ENSDORG00000027169	-	100	74.603	ENSTGUG00000010079	SNRPD3	100	74.603	Taeniopygia_guttata
ENSDORG00000027169	-	81	71.698	ENSTRUG00000023976	snrpd3l	90	71.698	Takifugu_rubripes
ENSDORG00000027169	-	100	69.291	ENSTNIG00000005323	snrpd3l	100	73.228	Tetraodon_nigroviridis
ENSDORG00000027169	-	100	74.603	ENSTBEG00000014334	SNRPD3	100	74.603	Tupaia_belangeri
ENSDORG00000027169	-	100	74.603	ENSTTRG00000006022	SNRPD3	100	74.603	Tursiops_truncatus
ENSDORG00000027169	-	100	74.603	ENSUAMG00000010767	SNRPD3	100	74.603	Ursus_americanus
ENSDORG00000027169	-	100	74.603	ENSUMAG00000001670	SNRPD3	100	74.603	Ursus_maritimus
ENSDORG00000027169	-	100	74.603	ENSVPAG00000000241	SNRPD3	100	74.603	Vicugna_pacos
ENSDORG00000027169	-	81	71.698	ENSVVUG00000019340	SNRPD3	53	71.698	Vulpes_vulpes
ENSDORG00000027169	-	100	64.844	ENSXETG00000024918	snrpd3	100	64.844	Xenopus_tropicalis
ENSDORG00000027169	-	100	69.291	ENSXCOG00000004795	snrpd3l	100	73.228	Xiphophorus_couchianus
ENSDORG00000027169	-	100	69.291	ENSXMAG00000001133	snrpd3l	100	73.228	Xiphophorus_maculatus