EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000027303 (Gene tree)
Gene ID: 105990575
Gene Symbol: Lig4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 7865 bases
Position: chrKN672411.1:77078-84942
Accession: 105990575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000016635	RNA_ligase	PF09414.10	7.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000034907	-	3910	XM_013023012	ENSDORP00000016635	911 (aa)	XP_012878466	A0A1S3FPG7

Gene Model

Click here to download ENSDORG00000027303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000027303's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000027303	Lig4	100	88.913	ENSG00000174405	LIG4	100	88.913	Homo_sapiens
ENSDORG00000027303	Lig4	99	65.449	ENSAPOG00000000866	lig4	99	65.559	Acanthochromis_polyacanthus
ENSDORG00000027303	Lig4	100	85.291	ENSAMEG00000019685	LIG4	99	85.291	Ailuropoda_melanoleuca
ENSDORG00000027303	Lig4	99	65.521	ENSACIG00000018309	lig4	98	65.632	Amphilophus_citrinellus
ENSDORG00000027303	Lig4	99	65.116	ENSAOCG00000011768	lig4	99	65.227	Amphiprion_ocellaris
ENSDORG00000027303	Lig4	99	65.227	ENSAPEG00000017815	lig4	99	65.338	Amphiprion_percula
ENSDORG00000027303	Lig4	99	65.597	ENSATEG00000005583	lig4	99	65.708	Anabas_testudineus
ENSDORG00000027303	Lig4	97	75.682	ENSAPLG00000001673	LIG4	99	75.682	Anas_platyrhynchos
ENSDORG00000027303	Lig4	99	74.863	ENSACAG00000014566	LIG4	100	74.863	Anolis_carolinensis
ENSDORG00000027303	Lig4	100	88.035	ENSANAG00000012446	LIG4	100	88.035	Aotus_nancymaae
ENSDORG00000027303	Lig4	99	65.743	ENSACLG00000027051	lig4	98	65.743	Astatotilapia_calliptera
ENSDORG00000027303	Lig4	99	65.116	ENSAMXG00000008192	lig4	93	65.116	Astyanax_mexicanus
ENSDORG00000027303	Lig4	100	85.620	ENSBTAG00000015868	LIG4	100	85.620	Bos_taurus
ENSDORG00000027303	Lig4	100	86.937	ENSCJAG00000014689	LIG4	100	86.937	Callithrix_jacchus
ENSDORG00000027303	Lig4	100	86.828	ENSCAFG00000006031	LIG4	100	86.828	Canis_familiaris
ENSDORG00000027303	Lig4	100	86.828	ENSCAFG00020021230	LIG4	100	86.828	Canis_lupus_dingo
ENSDORG00000027303	Lig4	100	85.620	ENSCHIG00000001019	LIG4	100	85.620	Capra_hircus
ENSDORG00000027303	Lig4	99	85.525	ENSCAPG00000006284	LIG4	100	85.525	Cavia_aperea
ENSDORG00000027303	Lig4	100	85.510	ENSCPOG00000014266	LIG4	100	85.510	Cavia_porcellus
ENSDORG00000027303	Lig4	100	87.377	ENSCCAG00000019971	LIG4	100	87.377	Cebus_capucinus
ENSDORG00000027303	Lig4	100	89.133	ENSCATG00000021075	LIG4	100	89.133	Cercocebus_atys
ENSDORG00000027303	Lig4	100	87.047	ENSCLAG00000003376	LIG4	100	87.047	Chinchilla_lanigera
ENSDORG00000027303	Lig4	100	89.243	ENSCSAG00000000211	LIG4	100	89.243	Chlorocebus_sabaeus
ENSDORG00000027303	Lig4	99	78.146	ENSCPBG00000023291	LIG4	99	78.146	Chrysemys_picta_bellii
ENSDORG00000027303	Lig4	68	45.628	ENSCING00000009536	-	95	45.628	Ciona_intestinalis
ENSDORG00000027303	Lig4	83	45.466	ENSCSAVG00000010336	-	98	45.466	Ciona_savignyi
ENSDORG00000027303	Lig4	100	89.243	ENSCANG00000005805	LIG4	100	89.243	Colobus_angolensis_palliatus
ENSDORG00000027303	Lig4	100	86.623	ENSCGRG00001012072	Lig4	100	86.623	Cricetulus_griseus_chok1gshd
ENSDORG00000027303	Lig4	100	86.623	ENSCGRG00000013417	Lig4	100	86.623	Cricetulus_griseus_crigri
ENSDORG00000027303	Lig4	97	66.818	ENSCSEG00000013905	lig4	95	66.818	Cynoglossus_semilaevis
ENSDORG00000027303	Lig4	99	66.224	ENSCVAG00000007896	lig4	99	66.224	Cyprinodon_variegatus
ENSDORG00000027303	Lig4	99	65.188	ENSDARG00000060620	lig4	98	65.188	Danio_rerio
ENSDORG00000027303	Lig4	100	85.636	ENSDNOG00000000513	LIG4	100	85.636	Dasypus_novemcinctus
ENSDORG00000027303	Lig4	89	32.277	FBgn0030506	Lig4	91	32.277	Drosophila_melanogaster
ENSDORG00000027303	Lig4	99	82.040	ENSETEG00000015563	LIG4	100	82.373	Echinops_telfairi
ENSDORG00000027303	Lig4	99	43.189	ENSEBUG00000014243	lig4	99	43.189	Eptatretus_burgeri
ENSDORG00000027303	Lig4	100	87.596	ENSEASG00005022073	LIG4	100	87.596	Equus_asinus_asinus
ENSDORG00000027303	Lig4	100	87.157	ENSECAG00000003257	LIG4	100	87.157	Equus_caballus
ENSDORG00000027303	Lig4	99	67.108	ENSELUG00000006787	lig4	99	67.219	Esox_lucius
ENSDORG00000027303	Lig4	100	86.059	ENSFCAG00000031985	LIG4	100	86.059	Felis_catus
ENSDORG00000027303	Lig4	88	77.029	ENSFALG00000004214	LIG4	97	77.029	Ficedula_albicollis
ENSDORG00000027303	Lig4	100	87.047	ENSFDAG00000008973	LIG4	100	87.047	Fukomys_damarensis
ENSDORG00000027303	Lig4	99	65.449	ENSFHEG00000007398	lig4	89	65.670	Fundulus_heteroclitus
ENSDORG00000027303	Lig4	85	65.212	ENSGMOG00000012843	lig4	99	65.212	Gadus_morhua
ENSDORG00000027303	Lig4	99	74.558	ENSGALG00000016854	LIG4	99	74.558	Gallus_gallus
ENSDORG00000027303	Lig4	99	65.590	ENSGAFG00000019779	lig4	95	65.604	Gambusia_affinis
ENSDORG00000027303	Lig4	99	63.787	ENSGACG00000014135	lig4	99	63.787	Gasterosteus_aculeatus
ENSDORG00000027303	Lig4	100	88.694	ENSGGOG00000027771	LIG4	100	88.694	Gorilla_gorilla
ENSDORG00000027303	Lig4	99	65.521	ENSHBUG00000006245	lig4	98	65.521	Haplochromis_burtoni
ENSDORG00000027303	Lig4	100	86.937	ENSHGLG00000000718	LIG4	100	86.937	Heterocephalus_glaber_female
ENSDORG00000027303	Lig4	100	86.937	ENSHGLG00100003265	LIG4	100	86.937	Heterocephalus_glaber_male
ENSDORG00000027303	Lig4	99	65.299	ENSHCOG00000012010	lig4	98	65.299	Hippocampus_comes
ENSDORG00000027303	Lig4	99	65.093	ENSIPUG00000013748	lig4	99	65.093	Ictalurus_punctatus
ENSDORG00000027303	Lig4	100	87.486	ENSSTOG00000024303	LIG4	100	87.486	Ictidomys_tridecemlineatus
ENSDORG00000027303	Lig4	100	86.608	ENSJJAG00000006750	Lig4	100	86.608	Jaculus_jaculus
ENSDORG00000027303	Lig4	99	65.670	ENSKMAG00000001149	lig4	99	65.670	Kryptolebias_marmoratus
ENSDORG00000027303	Lig4	91	65.625	ENSLBEG00000014578	lig4	100	65.745	Labrus_bergylta
ENSDORG00000027303	Lig4	99	73.009	ENSLACG00000003282	LIG4	99	73.009	Latimeria_chalumnae
ENSDORG00000027303	Lig4	99	70.419	ENSLOCG00000008901	lig4	97	70.419	Lepisosteus_oculatus
ENSDORG00000027303	Lig4	100	84.009	ENSLAFG00000031152	LIG4	100	84.009	Loxodonta_africana
ENSDORG00000027303	Lig4	100	89.352	ENSMFAG00000037235	LIG4	100	89.352	Macaca_fascicularis
ENSDORG00000027303	Lig4	100	89.352	ENSMMUG00000008874	LIG4	100	89.352	Macaca_mulatta
ENSDORG00000027303	Lig4	100	89.352	ENSMNEG00000023575	LIG4	100	89.352	Macaca_nemestrina
ENSDORG00000027303	Lig4	100	89.023	ENSMLEG00000026720	LIG4	100	89.023	Mandrillus_leucophaeus
ENSDORG00000027303	Lig4	99	65.891	ENSMAMG00000008472	lig4	98	66.002	Mastacembelus_armatus
ENSDORG00000027303	Lig4	99	65.743	ENSMZEG00005001855	lig4	98	65.743	Maylandia_zebra
ENSDORG00000027303	Lig4	99	75.111	ENSMGAG00000015532	LIG4	99	75.111	Meleagris_gallopavo
ENSDORG00000027303	Lig4	100	84.413	ENSMOCG00000019000	Lig4	100	84.413	Microtus_ochrogaster
ENSDORG00000027303	Lig4	99	65.006	ENSMMOG00000004390	lig4	99	65.006	Mola_mola
ENSDORG00000027303	Lig4	100	81.559	ENSMODG00000025064	LIG4	100	81.559	Monodelphis_domestica
ENSDORG00000027303	Lig4	99	65.891	ENSMALG00000008555	lig4	99	65.891	Monopterus_albus
ENSDORG00000027303	Lig4	100	86.169	MGP_CAROLIEiJ_G0030809	Lig4	100	86.169	Mus_caroli
ENSDORG00000027303	Lig4	100	85.620	ENSMUSG00000049717	Lig4	100	85.620	Mus_musculus
ENSDORG00000027303	Lig4	100	85.620	MGP_PahariEiJ_G0021270	Lig4	100	85.620	Mus_pahari
ENSDORG00000027303	Lig4	100	85.620	MGP_SPRETEiJ_G0031917	Lig4	100	85.620	Mus_spretus
ENSDORG00000027303	Lig4	100	86.169	ENSMPUG00000018675	LIG4	100	86.169	Mustela_putorius_furo
ENSDORG00000027303	Lig4	100	87.486	ENSMLUG00000001267	LIG4	100	87.486	Myotis_lucifugus
ENSDORG00000027303	Lig4	100	86.389	ENSNGAG00000013258	Lig4	100	86.389	Nannospalax_galili
ENSDORG00000027303	Lig4	99	65.743	ENSNBRG00000021252	lig4	98	65.743	Neolamprologus_brichardi
ENSDORG00000027303	Lig4	100	88.584	ENSNLEG00000007888	LIG4	100	88.584	Nomascus_leucogenys
ENSDORG00000027303	Lig4	100	85.730	ENSOPRG00000005765	LIG4	100	85.730	Ochotona_princeps
ENSDORG00000027303	Lig4	100	86.169	ENSODEG00000019683	LIG4	100	86.169	Octodon_degus
ENSDORG00000027303	Lig4	99	65.854	ENSONIG00000011969	lig4	97	65.965	Oreochromis_niloticus
ENSDORG00000027303	Lig4	100	87.816	ENSOCUG00000015734	LIG4	100	87.816	Oryctolagus_cuniculus
ENSDORG00000027303	Lig4	99	64.680	ENSORLG00000004041	lig4	99	64.680	Oryzias_latipes
ENSDORG00000027303	Lig4	99	65.121	ENSORLG00020019607	lig4	99	65.121	Oryzias_latipes_hni
ENSDORG00000027303	Lig4	99	64.790	ENSORLG00015017754	lig4	99	64.790	Oryzias_latipes_hsok
ENSDORG00000027303	Lig4	74	70.710	ENSOMEG00000003459	lig4	98	70.710	Oryzias_melastigma
ENSDORG00000027303	Lig4	100	86.842	ENSOGAG00000032120	LIG4	99	86.842	Otolemur_garnettii
ENSDORG00000027303	Lig4	82	87.919	ENSOARG00000005590	LIG4	98	87.919	Ovis_aries
ENSDORG00000027303	Lig4	100	88.694	ENSPPAG00000032998	LIG4	100	88.694	Pan_paniscus
ENSDORG00000027303	Lig4	100	86.498	ENSPPRG00000017804	LIG4	100	86.498	Panthera_pardus
ENSDORG00000027303	Lig4	100	86.389	ENSPTIG00000010051	LIG4	100	86.389	Panthera_tigris_altaica
ENSDORG00000027303	Lig4	100	88.804	ENSPTRG00000006025	LIG4	100	88.804	Pan_troglodytes
ENSDORG00000027303	Lig4	100	89.243	ENSPANG00000007562	LIG4	100	89.243	Papio_anubis
ENSDORG00000027303	Lig4	99	67.253	ENSPKIG00000011645	lig4	98	67.253	Paramormyrops_kingsleyae
ENSDORG00000027303	Lig4	99	77.363	ENSPSIG00000001504	LIG4	99	77.363	Pelodiscus_sinensis
ENSDORG00000027303	Lig4	99	62.889	ENSPMGG00000013486	lig4	99	62.569	Periophthalmus_magnuspinnatus
ENSDORG00000027303	Lig4	100	86.184	ENSPEMG00000000076	Lig4	100	86.184	Peromyscus_maniculatus_bairdii
ENSDORG00000027303	Lig4	100	81.360	ENSPCIG00000021882	LIG4	100	81.360	Phascolarctos_cinereus
ENSDORG00000027303	Lig4	99	65.517	ENSPFOG00000000797	lig4	99	65.495	Poecilia_formosa
ENSDORG00000027303	Lig4	99	65.406	ENSPLAG00000001196	lig4	99	65.385	Poecilia_latipinna
ENSDORG00000027303	Lig4	99	65.628	ENSPMEG00000021353	lig4	99	65.604	Poecilia_mexicana
ENSDORG00000027303	Lig4	99	65.406	ENSPREG00000007323	lig4	99	65.055	Poecilia_reticulata
ENSDORG00000027303	Lig4	100	88.694	ENSPPYG00000005540	LIG4	100	88.694	Pongo_abelii
ENSDORG00000027303	Lig4	100	86.608	ENSPVAG00000016403	LIG4	100	86.608	Pteropus_vampyrus
ENSDORG00000027303	Lig4	99	65.632	ENSPNYG00000009660	lig4	98	65.632	Pundamilia_nyererei
ENSDORG00000027303	Lig4	100	64.951	ENSPNAG00000028056	lig4	100	64.951	Pygocentrus_nattereri
ENSDORG00000027303	Lig4	100	64.951	ENSPNAG00000028069	LIG4	100	64.951	Pygocentrus_nattereri
ENSDORG00000027303	Lig4	100	84.742	ENSRNOG00000014605	Lig4	100	84.742	Rattus_norvegicus
ENSDORG00000027303	Lig4	100	87.706	ENSRBIG00000039962	LIG4	100	87.706	Rhinopithecus_bieti
ENSDORG00000027303	Lig4	100	88.694	ENSRROG00000006040	LIG4	100	88.694	Rhinopithecus_roxellana
ENSDORG00000027303	Lig4	100	87.157	ENSSBOG00000019029	LIG4	100	87.157	Saimiri_boliviensis_boliviensis
ENSDORG00000027303	Lig4	100	78.814	ENSSHAG00000009525	LIG4	100	79.167	Sarcophilus_harrisii
ENSDORG00000027303	Lig4	99	66.888	ENSSFOG00015012835	lig4	99	66.888	Scleropages_formosus
ENSDORG00000027303	Lig4	99	63.012	ENSSMAG00000011267	lig4	99	63.012	Scophthalmus_maximus
ENSDORG00000027303	Lig4	99	66.630	ENSSDUG00000010343	lig4	98	66.630	Seriola_dumerili
ENSDORG00000027303	Lig4	99	64.895	ENSSLDG00000003239	lig4	99	64.895	Seriola_lalandi_dorsalis
ENSDORG00000027303	Lig4	100	81.619	ENSSARG00000006573	LIG4	100	81.619	Sorex_araneus
ENSDORG00000027303	Lig4	93	76.540	ENSSPUG00000002444	LIG4	100	76.540	Sphenodon_punctatus
ENSDORG00000027303	Lig4	99	65.559	ENSSPAG00000001609	lig4	99	65.559	Stegastes_partitus
ENSDORG00000027303	Lig4	100	84.962	ENSSSCG00000009540	LIG4	100	84.962	Sus_scrofa
ENSDORG00000027303	Lig4	99	75.442	ENSTGUG00000010795	LIG4	99	75.442	Taeniopygia_guttata
ENSDORG00000027303	Lig4	99	65.559	ENSTRUG00000009984	lig4	99	65.559	Takifugu_rubripes
ENSDORG00000027303	Lig4	99	65.338	ENSTNIG00000010348	lig4	99	65.559	Tetraodon_nigroviridis
ENSDORG00000027303	Lig4	100	87.267	ENSTBEG00000017741	LIG4	100	87.267	Tupaia_belangeri
ENSDORG00000027303	Lig4	100	86.169	ENSTTRG00000012660	LIG4	100	86.169	Tursiops_truncatus
ENSDORG00000027303	Lig4	100	85.291	ENSUAMG00000003773	LIG4	100	85.291	Ursus_americanus
ENSDORG00000027303	Lig4	99	71.571	ENSXETG00000002654	lig4	99	71.571	Xenopus_tropicalis
ENSDORG00000027303	Lig4	99	65.517	ENSXCOG00000017401	lig4	99	65.165	Xiphophorus_couchianus
ENSDORG00000027303	Lig4	99	65.667	ENSXMAG00000015142	lig4	99	65.313	Xiphophorus_maculatus