EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000027340 (Gene tree)
Gene ID: 105987138
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 8A
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 1878 bases
Position: chrKN672385.1:9169489-9171366
Accession: 105987138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000019633	RRM_1	PF00076.22	2.2e-18	1	1
ENSDORP00000017804	RRM_1	PF00076.22	2.6e-18	1	1
ENSDORP00000017804	RRM_3	PF08777.11	1.8e-06	1	1
ENSDORP00000019633	RRM_3	PF08777.11	4.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000030284	-	734	XM_013018321	ENSDORP00000017804	174 (aa)	XP_012873775	A0A1S3FBZ6
ENSDORT00000034718	-	516	-	ENSDORP00000019633	171 (aa)	-	UPI000BAD2A82

Gene Model

Click here to download ENSDORG00000027340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000027340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000027340	-	61	32.000	ENSDORG00000009158	Elavl1	74	32.000
ENSDORG00000027340	-	57	31.313	ENSDORG00000015481	-	73	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000027340	-	100	100.000	ENSG00000265241	RBM8A	100	100.000	Homo_sapiens
ENSDORG00000027340	-	99	85.799	ENSAPOG00000009727	rbm8a	86	92.715	Acanthochromis_polyacanthus
ENSDORG00000027340	-	100	98.305	ENSAMEG00000017623	RBM8A	100	98.305	Ailuropoda_melanoleuca
ENSDORG00000027340	-	100	86.550	ENSACIG00000017678	rbm8a	94	93.377	Amphilophus_citrinellus
ENSDORG00000027340	-	99	85.799	ENSAOCG00000023887	rbm8a	73	92.715	Amphiprion_ocellaris
ENSDORG00000027340	-	99	85.799	ENSAPEG00000022847	rbm8a	73	92.715	Amphiprion_percula
ENSDORG00000027340	-	99	85.799	ENSATEG00000005630	rbm8a	86	92.715	Anabas_testudineus
ENSDORG00000027340	-	100	100.000	ENSANAG00000004525	RBM8A	100	100.000	Aotus_nancymaae
ENSDORG00000027340	-	99	85.799	ENSACLG00000009627	rbm8a	86	92.715	Astatotilapia_calliptera
ENSDORG00000027340	-	95	85.890	ENSAMXG00000040754	rbm8a	87	92.763	Astyanax_mexicanus
ENSDORG00000027340	-	83	55.102	WBGene00004387	rnp-4	87	60.317	Caenorhabditis_elegans
ENSDORG00000027340	-	100	100.000	ENSCJAG00000046869	RBM8A	100	100.000	Callithrix_jacchus
ENSDORG00000027340	-	100	100.000	ENSCAFG00000023172	RBM8A	100	100.000	Canis_familiaris
ENSDORG00000027340	-	100	100.000	ENSCAFG00020019945	RBM8A	100	100.000	Canis_lupus_dingo
ENSDORG00000027340	-	100	100.000	ENSCHIG00000012114	RBM8A	100	100.000	Capra_hircus
ENSDORG00000027340	-	100	100.000	ENSTSYG00000028809	RBM8A	100	100.000	Carlito_syrichta
ENSDORG00000027340	-	72	97.600	ENSCAPG00000014086	RBM8A	100	97.600	Cavia_aperea
ENSDORG00000027340	-	100	98.246	ENSCPOG00000022453	RBM8A	100	98.246	Cavia_porcellus
ENSDORG00000027340	-	100	100.000	ENSCCAG00000028589	-	100	100.000	Cebus_capucinus
ENSDORG00000027340	-	100	99.425	ENSCCAG00000022460	-	100	99.425	Cebus_capucinus
ENSDORG00000027340	-	100	100.000	ENSCATG00000021691	RBM8A	100	100.000	Cercocebus_atys
ENSDORG00000027340	-	100	100.000	ENSCLAG00000000547	RBM8A	100	100.000	Chinchilla_lanigera
ENSDORG00000027340	-	100	100.000	ENSCSAG00000001779	RBM8A	100	100.000	Chlorocebus_sabaeus
ENSDORG00000027340	-	100	99.425	ENSCPBG00000007941	RBM8A	80	99.425	Chrysemys_picta_bellii
ENSDORG00000027340	-	99	58.824	ENSCING00000004877	-	89	64.901	Ciona_intestinalis
ENSDORG00000027340	-	97	60.241	ENSCSAVG00000005685	-	89	65.563	Ciona_savignyi
ENSDORG00000027340	-	100	100.000	ENSCANG00000042182	RBM8A	100	100.000	Colobus_angolensis_palliatus
ENSDORG00000027340	-	99	83.815	ENSCGRG00001003032	-	92	78.947	Cricetulus_griseus_chok1gshd
ENSDORG00000027340	-	100	100.000	ENSCGRG00001002681	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSDORG00000027340	-	100	100.000	ENSCGRG00000006832	-	100	100.000	Cricetulus_griseus_crigri
ENSDORG00000027340	-	99	85.207	ENSCSEG00000011865	rbm8a	86	92.053	Cynoglossus_semilaevis
ENSDORG00000027340	-	99	83.432	ENSCVAG00000020734	rbm8a	86	90.066	Cyprinodon_variegatus
ENSDORG00000027340	-	97	86.747	ENSDARG00000016516	rbm8a	87	93.377	Danio_rerio
ENSDORG00000027340	-	53	93.333	ENSDNOG00000025265	-	100	93.407	Dasypus_novemcinctus
ENSDORG00000027340	-	99	59.538	FBgn0033378	tsu	92	64.935	Drosophila_melanogaster
ENSDORG00000027340	-	97	75.904	ENSETEG00000017932	-	87	81.457	Echinops_telfairi
ENSDORG00000027340	-	82	93.706	ENSETEG00000008411	-	81	93.706	Echinops_telfairi
ENSDORG00000027340	-	98	76.048	ENSEBUG00000010386	rbm8a	86	81.457	Eptatretus_burgeri
ENSDORG00000027340	-	100	100.000	ENSEASG00005007455	RBM8A	100	100.000	Equus_asinus_asinus
ENSDORG00000027340	-	100	100.000	ENSECAG00000022024	RBM8A	100	100.000	Equus_caballus
ENSDORG00000027340	-	100	73.563	ENSEEUG00000008823	RBM8A	100	73.563	Erinaceus_europaeus
ENSDORG00000027340	-	97	86.747	ENSELUG00000012464	rbm8a	86	92.715	Esox_lucius
ENSDORG00000027340	-	100	99.425	ENSFCAG00000033936	RBM8A	100	99.425	Felis_catus
ENSDORG00000027340	-	100	100.000	ENSFDAG00000020821	RBM8A	100	100.000	Fukomys_damarensis
ENSDORG00000027340	-	99	84.024	ENSFHEG00000013538	rbm8a	86	90.728	Fundulus_heteroclitus
ENSDORG00000027340	-	80	89.209	ENSGMOG00000007353	rbm8a	87	89.781	Gadus_morhua
ENSDORG00000027340	-	95	80.982	ENSGALG00000036283	RBM8A	91	81.287	Gallus_gallus
ENSDORG00000027340	-	99	84.615	ENSGAFG00000021698	rbm8a	86	91.391	Gambusia_affinis
ENSDORG00000027340	-	80	89.928	ENSGACG00000013157	rbm8a	87	90.511	Gasterosteus_aculeatus
ENSDORG00000027340	-	100	99.425	ENSGAGG00000023769	RBM8A	100	99.425	Gopherus_agassizii
ENSDORG00000027340	-	100	100.000	ENSGGOG00000037248	RBM8A	100	100.000	Gorilla_gorilla
ENSDORG00000027340	-	100	85.965	ENSHBUG00000008827	rbm8a	94	92.715	Haplochromis_burtoni
ENSDORG00000027340	-	100	100.000	ENSHGLG00000007303	RBM8A	100	100.000	Heterocephalus_glaber_female
ENSDORG00000027340	-	100	100.000	ENSHGLG00100012468	RBM8A	100	100.000	Heterocephalus_glaber_male
ENSDORG00000027340	-	98	83.832	ENSHCOG00000010122	rbm8a	86	90.066	Hippocampus_comes
ENSDORG00000027340	-	97	85.542	ENSIPUG00000006525	rbm8a	78	92.053	Ictalurus_punctatus
ENSDORG00000027340	-	100	99.425	ENSSTOG00000013917	RBM8A	100	99.425	Ictidomys_tridecemlineatus
ENSDORG00000027340	-	100	100.000	ENSJJAG00000009488	-	100	100.000	Jaculus_jaculus
ENSDORG00000027340	-	99	83.432	ENSKMAG00000014454	rbm8a	86	90.066	Kryptolebias_marmoratus
ENSDORG00000027340	-	99	85.207	ENSLBEG00000015720	rbm8a	86	92.053	Labrus_bergylta
ENSDORG00000027340	-	97	88.554	ENSLACG00000014365	RBM8A	88	93.506	Latimeria_chalumnae
ENSDORG00000027340	-	97	86.747	ENSLOCG00000009082	rbm8a	87	93.377	Lepisosteus_oculatus
ENSDORG00000027340	-	100	99.425	ENSLAFG00000021886	-	100	99.425	Loxodonta_africana
ENSDORG00000027340	-	99	70.056	ENSLAFG00000011031	-	87	67.949	Loxodonta_africana
ENSDORG00000027340	-	100	100.000	ENSMFAG00000045376	RBM8A	100	100.000	Macaca_fascicularis
ENSDORG00000027340	-	100	96.491	ENSMMUG00000016051	RBM8A	100	96.491	Macaca_mulatta
ENSDORG00000027340	-	100	100.000	ENSMNEG00000040422	RBM8A	100	100.000	Macaca_nemestrina
ENSDORG00000027340	-	100	100.000	ENSMLEG00000039155	RBM8A	100	100.000	Mandrillus_leucophaeus
ENSDORG00000027340	-	99	83.432	ENSMAMG00000010565	rbm8a	86	90.066	Mastacembelus_armatus
ENSDORG00000027340	-	99	85.799	ENSMZEG00005016453	rbm8a	86	92.715	Maylandia_zebra
ENSDORG00000027340	-	100	100.000	ENSMAUG00000016783	-	100	100.000	Mesocricetus_auratus
ENSDORG00000027340	-	100	71.930	ENSMICG00000037163	-	93	79.470	Microcebus_murinus
ENSDORG00000027340	-	100	100.000	ENSMICG00000031698	-	100	100.000	Microcebus_murinus
ENSDORG00000027340	-	100	100.000	ENSMOCG00000017782	-	100	100.000	Microtus_ochrogaster
ENSDORG00000027340	-	92	79.375	ENSMMOG00000017179	rbm8a	87	89.051	Mola_mola
ENSDORG00000027340	-	100	99.425	ENSMODG00000018752	RBM8A	100	99.425	Monodelphis_domestica
ENSDORG00000027340	-	99	84.024	ENSMALG00000010145	rbm8a	86	90.728	Monopterus_albus
ENSDORG00000027340	-	95	88.957	MGP_CAROLIEiJ_G0014951	Rbm8a2	87	96.053	Mus_caroli
ENSDORG00000027340	-	100	100.000	MGP_CAROLIEiJ_G0025383	Rbm8a	100	100.000	Mus_caroli
ENSDORG00000027340	-	100	97.701	ENSMUSG00000078184	Rbm8a2	100	97.701	Mus_musculus
ENSDORG00000027340	-	100	100.000	ENSMUSG00000038374	Rbm8a	100	100.000	Mus_musculus
ENSDORG00000027340	-	100	100.000	MGP_PahariEiJ_G0026828	-	100	100.000	Mus_pahari
ENSDORG00000027340	-	100	100.000	MGP_SPRETEiJ_G0026330	Rbm8a	100	100.000	Mus_spretus
ENSDORG00000027340	-	100	100.000	ENSMPUG00000000775	RBM8A	100	100.000	Mustela_putorius_furo
ENSDORG00000027340	-	100	100.000	ENSMLUG00000017436	-	100	100.000	Myotis_lucifugus
ENSDORG00000027340	-	95	82.822	ENSMLUG00000022711	-	87	89.474	Myotis_lucifugus
ENSDORG00000027340	-	100	99.425	ENSNGAG00000016038	-	100	99.425	Nannospalax_galili
ENSDORG00000027340	-	99	85.799	ENSNBRG00000004541	rbm8a	86	92.715	Neolamprologus_brichardi
ENSDORG00000027340	-	100	100.000	ENSNLEG00000029632	RBM8A	100	100.000	Nomascus_leucogenys
ENSDORG00000027340	-	75	97.710	ENSMEUG00000016058	RBM8A	100	97.710	Notamacropus_eugenii
ENSDORG00000027340	-	66	100.000	ENSOPRG00000013316	RBM8A	100	100.000	Ochotona_princeps
ENSDORG00000027340	-	95	77.914	ENSODEG00000002094	-	86	84.211	Octodon_degus
ENSDORG00000027340	-	95	79.755	ENSODEG00000008563	-	87	84.868	Octodon_degus
ENSDORG00000027340	-	100	100.000	ENSODEG00000000114	-	100	100.000	Octodon_degus
ENSDORG00000027340	-	99	85.799	ENSONIG00000008608	rbm8a	86	92.715	Oreochromis_niloticus
ENSDORG00000027340	-	100	98.305	ENSOCUG00000025693	RBM8A	100	98.305	Oryctolagus_cuniculus
ENSDORG00000027340	-	99	82.840	ENSORLG00000016263	rbm8a	86	89.404	Oryzias_latipes
ENSDORG00000027340	-	100	83.041	ENSORLG00020012904	rbm8a	80	89.404	Oryzias_latipes_hni
ENSDORG00000027340	-	99	82.840	ENSORLG00015018824	rbm8a	86	89.404	Oryzias_latipes_hsok
ENSDORG00000027340	-	99	83.432	ENSOMEG00000021533	rbm8a	67	90.066	Oryzias_melastigma
ENSDORG00000027340	-	100	98.305	ENSOGAG00000000202	RBM8A	100	98.305	Otolemur_garnettii
ENSDORG00000027340	-	100	99.425	ENSOARG00000020634	RBM8A	100	99.425	Ovis_aries
ENSDORG00000027340	-	100	100.000	ENSPPAG00000029116	RBM8A	100	100.000	Pan_paniscus
ENSDORG00000027340	-	100	99.425	ENSPPRG00000008243	RBM8A	100	99.425	Panthera_pardus
ENSDORG00000027340	-	100	100.000	ENSPTIG00000009472	RBM8A	100	100.000	Panthera_tigris_altaica
ENSDORG00000027340	-	100	100.000	ENSPTRG00000001201	RBM8A	100	100.000	Pan_troglodytes
ENSDORG00000027340	-	100	100.000	ENSPANG00000020584	RBM8A	100	100.000	Papio_anubis
ENSDORG00000027340	-	98	85.629	ENSPKIG00000009551	rbm8a	64	92.053	Paramormyrops_kingsleyae
ENSDORG00000027340	-	97	83.735	ENSPKIG00000020558	rbm8a	87	90.066	Paramormyrops_kingsleyae
ENSDORG00000027340	-	99	85.799	ENSPMGG00000010122	rbm8a	86	92.715	Periophthalmus_magnuspinnatus
ENSDORG00000027340	-	100	100.000	ENSPEMG00000018117	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSDORG00000027340	-	100	99.425	ENSPCIG00000011931	RBM8A	100	99.425	Phascolarctos_cinereus
ENSDORG00000027340	-	99	85.207	ENSPFOG00000010695	rbm8a	86	92.053	Poecilia_formosa
ENSDORG00000027340	-	99	85.207	ENSPLAG00000009183	rbm8a	86	92.053	Poecilia_latipinna
ENSDORG00000027340	-	99	85.207	ENSPMEG00000013950	rbm8a	86	92.053	Poecilia_mexicana
ENSDORG00000027340	-	100	84.795	ENSPREG00000017572	rbm8a	94	91.391	Poecilia_reticulata
ENSDORG00000027340	-	100	100.000	ENSPPYG00000000929	RBM8A	100	100.000	Pongo_abelii
ENSDORG00000027340	-	100	98.851	ENSPCAG00000002146	-	100	98.851	Procavia_capensis
ENSDORG00000027340	-	100	100.000	ENSPCOG00000022886	RBM8A	100	100.000	Propithecus_coquereli
ENSDORG00000027340	-	100	100.000	ENSPVAG00000014471	RBM8A	100	100.000	Pteropus_vampyrus
ENSDORG00000027340	-	99	85.799	ENSPNYG00000013564	rbm8a	86	92.715	Pundamilia_nyererei
ENSDORG00000027340	-	97	87.349	ENSPNAG00000028502	rbm8a	87	94.040	Pygocentrus_nattereri
ENSDORG00000027340	-	100	100.000	ENSRNOG00000021215	Rbm8a	100	100.000	Rattus_norvegicus
ENSDORG00000027340	-	100	99.425	ENSRBIG00000039233	RBM8A	100	99.425	Rhinopithecus_bieti
ENSDORG00000027340	-	100	93.678	ENSRROG00000033023	-	100	93.678	Rhinopithecus_roxellana
ENSDORG00000027340	-	100	100.000	ENSRROG00000040324	-	100	100.000	Rhinopithecus_roxellana
ENSDORG00000027340	-	100	100.000	ENSSBOG00000031316	RBM8A	100	100.000	Saimiri_boliviensis_boliviensis
ENSDORG00000027340	-	100	99.425	ENSSHAG00000018629	RBM8A	100	99.425	Sarcophilus_harrisii
ENSDORG00000027340	-	97	84.337	ENSSFOG00015024171	rbm8a	87	90.066	Scleropages_formosus
ENSDORG00000027340	-	97	86.747	ENSSFOG00015009007	rbm8a	87	93.377	Scleropages_formosus
ENSDORG00000027340	-	99	84.615	ENSSMAG00000012998	rbm8a	86	91.391	Scophthalmus_maximus
ENSDORG00000027340	-	99	85.799	ENSSDUG00000005911	rbm8a	86	92.715	Seriola_dumerili
ENSDORG00000027340	-	99	85.799	ENSSLDG00000011664	rbm8a	86	92.715	Seriola_lalandi_dorsalis
ENSDORG00000027340	-	100	100.000	ENSSARG00000013289	RBM8A	100	100.000	Sorex_araneus
ENSDORG00000027340	-	100	98.851	ENSSPUG00000001576	RBM8A	100	98.851	Sphenodon_punctatus
ENSDORG00000027340	-	99	85.799	ENSSPAG00000012181	rbm8a	86	92.715	Stegastes_partitus
ENSDORG00000027340	-	100	100.000	ENSSSCG00000028509	RBM8A	100	100.000	Sus_scrofa
ENSDORG00000027340	-	95	88.344	ENSTGUG00000004447	RBM8A	87	95.395	Taeniopygia_guttata
ENSDORG00000027340	-	99	82.840	ENSTRUG00000013173	rbm8a	86	89.404	Takifugu_rubripes
ENSDORG00000027340	-	99	83.432	ENSTNIG00000006869	rbm8a	86	90.066	Tetraodon_nigroviridis
ENSDORG00000027340	-	66	100.000	ENSTBEG00000014947	RBM8A	100	100.000	Tupaia_belangeri
ENSDORG00000027340	-	87	100.000	ENSTTRG00000009081	RBM8A	100	100.000	Tursiops_truncatus
ENSDORG00000027340	-	100	100.000	ENSUAMG00000021929	RBM8A	100	100.000	Ursus_americanus
ENSDORG00000027340	-	100	100.000	ENSUMAG00000010298	RBM8A	100	100.000	Ursus_maritimus
ENSDORG00000027340	-	100	100.000	ENSVVUG00000007486	RBM8A	100	100.000	Vulpes_vulpes
ENSDORG00000027340	-	99	84.615	ENSXCOG00000004369	rbm8a	86	91.391	Xiphophorus_couchianus
ENSDORG00000027340	-	100	83.626	ENSXMAG00000013463	rbm8a	94	90.066	Xiphophorus_maculatus