EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000027343 (Gene tree)
Gene ID: 105997108
Gene Symbol: Rnpc3
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 24624 bases
Position: chrKN672485.1:1373677-1398300
Accession: 105997108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000023247	RRM_1	PF00076.22	9.5e-19	1	2
ENSDORP00000023247	RRM_1	PF00076.22	9.5e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000035857	-	2521	XM_013031410	ENSDORP00000023247	515 (aa)	XP_012886864	A0A1S3GF38

Gene Model

Click here to download ENSDORG00000027343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000027343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000027343	Rnpc3	99	90.504	ENSG00000185946	RNPC3	100	92.029	Homo_sapiens
ENSDORG00000027343	Rnpc3	95	55.894	ENSAPOG00000017371	rnpc3	97	55.894	Acanthochromis_polyacanthus
ENSDORG00000027343	Rnpc3	98	90.748	ENSAMEG00000001694	RNPC3	99	90.173	Ailuropoda_melanoleuca
ENSDORG00000027343	Rnpc3	95	52.789	ENSACIG00000021043	rnpc3	97	52.789	Amphilophus_citrinellus
ENSDORG00000027343	Rnpc3	95	55.311	ENSAOCG00000014052	rnpc3	95	55.311	Amphiprion_ocellaris
ENSDORG00000027343	Rnpc3	95	55.110	ENSAPEG00000008739	rnpc3	95	55.110	Amphiprion_percula
ENSDORG00000027343	Rnpc3	96	54.150	ENSATEG00000021263	rnpc3	98	54.150	Anabas_testudineus
ENSDORG00000027343	Rnpc3	88	68.860	ENSAPLG00000015605	RNPC3	100	69.095	Anas_platyrhynchos
ENSDORG00000027343	Rnpc3	95	67.755	ENSACAG00000002029	RNPC3	96	68.548	Anolis_carolinensis
ENSDORG00000027343	Rnpc3	99	89.535	ENSANAG00000019950	RNPC3	99	89.535	Aotus_nancymaae
ENSDORG00000027343	Rnpc3	95	53.862	ENSACLG00000014702	rnpc3	96	53.862	Astatotilapia_calliptera
ENSDORG00000027343	Rnpc3	95	57.258	ENSAMXG00000033372	rnpc3	97	57.661	Astyanax_mexicanus
ENSDORG00000027343	Rnpc3	99	90.310	ENSBTAG00000019091	RNPC3	99	90.310	Bos_taurus
ENSDORG00000027343	Rnpc3	99	85.659	ENSCJAG00000035686	RNPC3	99	86.047	Callithrix_jacchus
ENSDORG00000027343	Rnpc3	99	89.749	ENSCAFG00000019972	RNPC3	99	89.749	Canis_familiaris
ENSDORG00000027343	Rnpc3	99	89.749	ENSCAFG00020011300	RNPC3	99	89.749	Canis_lupus_dingo
ENSDORG00000027343	Rnpc3	99	90.504	ENSCHIG00000020361	RNPC3	99	90.504	Capra_hircus
ENSDORG00000027343	Rnpc3	99	89.341	ENSTSYG00000030256	RNPC3	99	89.341	Carlito_syrichta
ENSDORG00000027343	Rnpc3	84	77.803	ENSCAPG00000013600	RNPC3	99	76.659	Cavia_aperea
ENSDORG00000027343	Rnpc3	99	88.372	ENSCPOG00000031638	RNPC3	99	88.372	Cavia_porcellus
ENSDORG00000027343	Rnpc3	99	89.535	ENSCCAG00000024301	RNPC3	99	89.535	Cebus_capucinus
ENSDORG00000027343	Rnpc3	99	90.291	ENSCATG00000002086	RNPC3	99	90.291	Cercocebus_atys
ENSDORG00000027343	Rnpc3	98	69.246	ENSCATG00000035930	-	98	67.659	Cercocebus_atys
ENSDORG00000027343	Rnpc3	99	85.078	ENSCLAG00000005169	RNPC3	99	85.078	Chinchilla_lanigera
ENSDORG00000027343	Rnpc3	99	90.097	ENSCSAG00000001519	RNPC3	99	90.097	Chlorocebus_sabaeus
ENSDORG00000027343	Rnpc3	96	70.766	ENSCPBG00000028311	RNPC3	96	70.766	Chrysemys_picta_bellii
ENSDORG00000027343	Rnpc3	95	37.132	ENSCING00000021276	-	100	36.653	Ciona_intestinalis
ENSDORG00000027343	Rnpc3	93	37.292	ENSCSAVG00000002800	-	74	60.833	Ciona_savignyi
ENSDORG00000027343	Rnpc3	99	89.903	ENSCANG00000031444	RNPC3	99	89.903	Colobus_angolensis_palliatus
ENSDORG00000027343	Rnpc3	99	88.178	ENSCGRG00001019276	Rnpc3	100	88.178	Cricetulus_griseus_chok1gshd
ENSDORG00000027343	Rnpc3	87	88.496	ENSCGRG00000000053	Rnpc3	100	88.496	Cricetulus_griseus_crigri
ENSDORG00000027343	Rnpc3	95	53.846	ENSCSEG00000013475	rnpc3	97	53.846	Cynoglossus_semilaevis
ENSDORG00000027343	Rnpc3	95	52.930	ENSCVAG00000002645	rnpc3	97	52.930	Cyprinodon_variegatus
ENSDORG00000027343	Rnpc3	95	56.944	ENSDARG00000011247	rnpc3	89	66.667	Danio_rerio
ENSDORG00000027343	Rnpc3	99	88.566	ENSDNOG00000047498	-	99	88.566	Dasypus_novemcinctus
ENSDORG00000027343	Rnpc3	99	88.566	ENSDNOG00000044555	-	99	88.566	Dasypus_novemcinctus
ENSDORG00000027343	Rnpc3	96	46.887	ENSEBUG00000002068	rnpc3	98	47.656	Eptatretus_burgeri
ENSDORG00000027343	Rnpc3	99	89.942	ENSEASG00005015957	RNPC3	99	89.942	Equus_asinus_asinus
ENSDORG00000027343	Rnpc3	99	90.135	ENSECAG00000021148	RNPC3	99	90.135	Equus_caballus
ENSDORG00000027343	Rnpc3	95	52.998	ENSELUG00000002264	rnpc3	97	50.854	Esox_lucius
ENSDORG00000027343	Rnpc3	99	90.909	ENSFCAG00000024312	RNPC3	99	90.909	Felis_catus
ENSDORG00000027343	Rnpc3	88	70.640	ENSFALG00000002580	RNPC3	100	71.292	Ficedula_albicollis
ENSDORG00000027343	Rnpc3	99	89.729	ENSFDAG00000019948	RNPC3	100	89.729	Fukomys_damarensis
ENSDORG00000027343	Rnpc3	96	50.403	ENSFHEG00000020647	rnpc3	98	48.824	Fundulus_heteroclitus
ENSDORG00000027343	Rnpc3	95	54.435	ENSGMOG00000019213	rnpc3	96	53.644	Gadus_morhua
ENSDORG00000027343	Rnpc3	97	69.804	ENSGALG00000005162	RNPC3	89	70.243	Gallus_gallus
ENSDORG00000027343	Rnpc3	96	52.381	ENSGAFG00000017236	rnpc3	98	52.381	Gambusia_affinis
ENSDORG00000027343	Rnpc3	95	55.397	ENSGACG00000002048	rnpc3	96	54.582	Gasterosteus_aculeatus
ENSDORG00000027343	Rnpc3	96	70.363	ENSGAGG00000008438	RNPC3	100	68.199	Gopherus_agassizii
ENSDORG00000027343	Rnpc3	99	72.941	ENSGGOG00000026201	-	99	72.941	Gorilla_gorilla
ENSDORG00000027343	Rnpc3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSDORG00000027343	Rnpc3	99	89.341	ENSHGLG00000001708	RNPC3	99	89.341	Heterocephalus_glaber_female
ENSDORG00000027343	Rnpc3	99	89.341	ENSHGLG00100003005	RNPC3	99	89.341	Heterocephalus_glaber_male
ENSDORG00000027343	Rnpc3	95	53.521	ENSHCOG00000017135	rnpc3	97	53.521	Hippocampus_comes
ENSDORG00000027343	Rnpc3	95	56.539	ENSIPUG00000002916	rnpc3	97	55.689	Ictalurus_punctatus
ENSDORG00000027343	Rnpc3	99	89.922	ENSSTOG00000025020	RNPC3	99	89.922	Ictidomys_tridecemlineatus
ENSDORG00000027343	Rnpc3	99	87.016	ENSJJAG00000010203	Rnpc3	100	87.984	Jaculus_jaculus
ENSDORG00000027343	Rnpc3	95	53.600	ENSKMAG00000017358	rnpc3	98	53.045	Kryptolebias_marmoratus
ENSDORG00000027343	Rnpc3	95	54.600	ENSLBEG00000024901	rnpc3	95	54.600	Labrus_bergylta
ENSDORG00000027343	Rnpc3	95	61.992	ENSLACG00000005720	RNPC3	90	62.195	Latimeria_chalumnae
ENSDORG00000027343	Rnpc3	95	58.078	ENSLOCG00000007986	rnpc3	96	60.327	Lepisosteus_oculatus
ENSDORG00000027343	Rnpc3	99	87.016	ENSLAFG00000032342	RNPC3	100	87.016	Loxodonta_africana
ENSDORG00000027343	Rnpc3	99	90.097	ENSMFAG00000002004	RNPC3	99	90.097	Macaca_fascicularis
ENSDORG00000027343	Rnpc3	99	64.981	ENSMFAG00000002917	-	99	65.175	Macaca_fascicularis
ENSDORG00000027343	Rnpc3	82	81.604	ENSMMUG00000002098	-	91	81.604	Macaca_mulatta
ENSDORG00000027343	Rnpc3	99	89.903	ENSMMUG00000018039	RNPC3	99	89.903	Macaca_mulatta
ENSDORG00000027343	Rnpc3	98	61.341	ENSMNEG00000029209	-	98	63.492	Macaca_nemestrina
ENSDORG00000027343	Rnpc3	99	85.437	ENSMNEG00000033950	RNPC3	99	85.437	Macaca_nemestrina
ENSDORG00000027343	Rnpc3	99	90.291	ENSMLEG00000033628	RNPC3	99	90.291	Mandrillus_leucophaeus
ENSDORG00000027343	Rnpc3	98	67.780	ENSMLEG00000034644	-	98	66.602	Mandrillus_leucophaeus
ENSDORG00000027343	Rnpc3	95	51.800	ENSMAMG00000007496	rnpc3	97	50.584	Mastacembelus_armatus
ENSDORG00000027343	Rnpc3	95	52.778	ENSMZEG00005020233	rnpc3	97	52.778	Maylandia_zebra
ENSDORG00000027343	Rnpc3	88	69.214	ENSMGAG00000006381	RNPC3	100	69.214	Meleagris_gallopavo
ENSDORG00000027343	Rnpc3	97	89.379	ENSMAUG00000001358	Rnpc3	100	88.760	Mesocricetus_auratus
ENSDORG00000027343	Rnpc3	99	90.698	ENSMICG00000029591	RNPC3	99	90.698	Microcebus_murinus
ENSDORG00000027343	Rnpc3	97	88.600	ENSMOCG00000013423	Rnpc3	100	87.645	Microtus_ochrogaster
ENSDORG00000027343	Rnpc3	95	51.120	ENSMMOG00000005309	rnpc3	97	50.905	Mola_mola
ENSDORG00000027343	Rnpc3	100	76.402	ENSMODG00000002946	RNPC3	100	76.402	Monodelphis_domestica
ENSDORG00000027343	Rnpc3	96	52.475	ENSMALG00000015471	rnpc3	98	52.475	Monopterus_albus
ENSDORG00000027343	Rnpc3	99	87.016	MGP_CAROLIEiJ_G0025555	Rnpc3	100	87.033	Mus_caroli
ENSDORG00000027343	Rnpc3	99	87.209	ENSMUSG00000027981	Rnpc3	100	87.209	Mus_musculus
ENSDORG00000027343	Rnpc3	99	87.209	MGP_PahariEiJ_G0027001	Rnpc3	100	87.230	Mus_pahari
ENSDORG00000027343	Rnpc3	99	86.628	MGP_SPRETEiJ_G0026505	Rnpc3	100	86.640	Mus_spretus
ENSDORG00000027343	Rnpc3	99	89.555	ENSMPUG00000007349	RNPC3	99	89.555	Mustela_putorius_furo
ENSDORG00000027343	Rnpc3	99	89.147	ENSMLUG00000028743	RNPC3	99	89.147	Myotis_lucifugus
ENSDORG00000027343	Rnpc3	99	87.743	ENSNGAG00000010939	Rnpc3	100	87.791	Nannospalax_galili
ENSDORG00000027343	Rnpc3	95	53.659	ENSNBRG00000012196	rnpc3	93	53.659	Neolamprologus_brichardi
ENSDORG00000027343	Rnpc3	99	90.310	ENSNLEG00000012013	RNPC3	99	90.310	Nomascus_leucogenys
ENSDORG00000027343	Rnpc3	99	86.434	ENSODEG00000007612	RNPC3	99	86.434	Octodon_degus
ENSDORG00000027343	Rnpc3	95	54.065	ENSONIG00000004770	rnpc3	99	54.065	Oreochromis_niloticus
ENSDORG00000027343	Rnpc3	90	75.589	ENSOANG00000008220	RNPC3	100	75.319	Ornithorhynchus_anatinus
ENSDORG00000027343	Rnpc3	99	88.760	ENSOCUG00000004016	RNPC3	99	89.147	Oryctolagus_cuniculus
ENSDORG00000027343	Rnpc3	96	52.705	ENSORLG00000005694	rnpc3	98	52.705	Oryzias_latipes
ENSDORG00000027343	Rnpc3	96	53.678	ENSORLG00020005513	rnpc3	98	52.023	Oryzias_latipes_hni
ENSDORG00000027343	Rnpc3	95	53.213	ENSORLG00015002179	rnpc3	97	51.556	Oryzias_latipes_hsok
ENSDORG00000027343	Rnpc3	95	53.441	ENSOMEG00000017737	rnpc3	97	54.545	Oryzias_melastigma
ENSDORG00000027343	Rnpc3	99	90.116	ENSOGAG00000026182	RNPC3	99	90.116	Otolemur_garnettii
ENSDORG00000027343	Rnpc3	99	90.310	ENSOARG00000018719	RNPC3	99	90.310	Ovis_aries
ENSDORG00000027343	Rnpc3	99	73.922	ENSPPAG00000030278	-	99	74.118	Pan_paniscus
ENSDORG00000027343	Rnpc3	99	90.135	ENSPPAG00000037459	RNPC3	99	90.135	Pan_paniscus
ENSDORG00000027343	Rnpc3	99	90.522	ENSPPRG00000020246	RNPC3	99	90.522	Panthera_pardus
ENSDORG00000027343	Rnpc3	98	90.730	ENSPTIG00000009887	RNPC3	99	90.730	Panthera_tigris_altaica
ENSDORG00000027343	Rnpc3	99	90.310	ENSPTRG00000033902	RNPC3	99	90.310	Pan_troglodytes
ENSDORG00000027343	Rnpc3	99	72.763	ENSPTRG00000044227	-	99	72.763	Pan_troglodytes
ENSDORG00000027343	Rnpc3	98	70.949	ENSPANG00000029957	-	99	69.368	Papio_anubis
ENSDORG00000027343	Rnpc3	99	90.291	ENSPANG00000012137	RNPC3	99	90.291	Papio_anubis
ENSDORG00000027343	Rnpc3	94	52.800	ENSPKIG00000008828	rnpc3	95	51.383	Paramormyrops_kingsleyae
ENSDORG00000027343	Rnpc3	63	68.882	ENSPSIG00000007396	RNPC3	100	67.372	Pelodiscus_sinensis
ENSDORG00000027343	Rnpc3	95	50.803	ENSPMGG00000011742	rnpc3	97	51.509	Periophthalmus_magnuspinnatus
ENSDORG00000027343	Rnpc3	88	88.840	ENSPEMG00000020112	Rnpc3	100	89.602	Peromyscus_maniculatus_bairdii
ENSDORG00000027343	Rnpc3	96	43.570	ENSPMAG00000003778	rnpc3	98	44.828	Petromyzon_marinus
ENSDORG00000027343	Rnpc3	100	76.505	ENSPCIG00000004415	-	100	76.505	Phascolarctos_cinereus
ENSDORG00000027343	Rnpc3	96	52.286	ENSPFOG00000009895	rnpc3	97	52.286	Poecilia_formosa
ENSDORG00000027343	Rnpc3	96	52.286	ENSPLAG00000012023	rnpc3	97	52.286	Poecilia_latipinna
ENSDORG00000027343	Rnpc3	96	52.485	ENSPMEG00000003663	rnpc3	97	52.485	Poecilia_mexicana
ENSDORG00000027343	Rnpc3	96	51.889	ENSPREG00000010206	rnpc3	98	52.087	Poecilia_reticulata
ENSDORG00000027343	Rnpc3	84	86.406	ENSPPYG00000001102	RNPC3	99	86.406	Pongo_abelii
ENSDORG00000027343	Rnpc3	95	53.659	ENSPNYG00000020603	rnpc3	96	53.659	Pundamilia_nyererei
ENSDORG00000027343	Rnpc3	96	53.740	ENSPNAG00000000524	rnpc3	90	54.314	Pygocentrus_nattereri
ENSDORG00000027343	Rnpc3	99	86.240	ENSRNOG00000017310	Rnpc3	100	86.240	Rattus_norvegicus
ENSDORG00000027343	Rnpc3	99	84.884	ENSRBIG00000043897	RNPC3	99	84.884	Rhinopithecus_bieti
ENSDORG00000027343	Rnpc3	99	90.485	ENSRROG00000032334	RNPC3	99	90.485	Rhinopithecus_roxellana
ENSDORG00000027343	Rnpc3	99	88.760	ENSSBOG00000024473	RNPC3	99	88.760	Saimiri_boliviensis_boliviensis
ENSDORG00000027343	Rnpc3	100	75.629	ENSSHAG00000011859	RNPC3	100	75.629	Sarcophilus_harrisii
ENSDORG00000027343	Rnpc3	96	58.800	ENSSFOG00015013055	rnpc3	99	56.809	Scleropages_formosus
ENSDORG00000027343	Rnpc3	96	51.468	ENSSMAG00000020346	rnpc3	99	50.570	Scophthalmus_maximus
ENSDORG00000027343	Rnpc3	95	54.400	ENSSDUG00000006600	rnpc3	96	54.400	Seriola_dumerili
ENSDORG00000027343	Rnpc3	95	54.600	ENSSLDG00000007979	rnpc3	96	54.600	Seriola_lalandi_dorsalis
ENSDORG00000027343	Rnpc3	95	69.919	ENSSPUG00000008539	-	95	70.080	Sphenodon_punctatus
ENSDORG00000027343	Rnpc3	96	65.060	ENSSPUG00000003872	-	93	65.060	Sphenodon_punctatus
ENSDORG00000027343	Rnpc3	95	54.990	ENSSPAG00000005633	rnpc3	97	55.601	Stegastes_partitus
ENSDORG00000027343	Rnpc3	99	89.341	ENSSSCG00000037254	RNPC3	99	89.147	Sus_scrofa
ENSDORG00000027343	Rnpc3	88	69.690	ENSTGUG00000004795	-	100	69.027	Taeniopygia_guttata
ENSDORG00000027343	Rnpc3	95	53.550	ENSTNIG00000018963	rnpc3	97	53.550	Tetraodon_nigroviridis
ENSDORG00000027343	Rnpc3	98	91.124	ENSUMAG00000007775	RNPC3	99	91.124	Ursus_maritimus
ENSDORG00000027343	Rnpc3	99	89.749	ENSVVUG00000000331	RNPC3	99	89.749	Vulpes_vulpes
ENSDORG00000027343	Rnpc3	97	50.781	ENSXETG00000025027	rnpc3	99	50.781	Xenopus_tropicalis
ENSDORG00000027343	Rnpc3	96	51.367	ENSXCOG00000005013	rnpc3	98	50.190	Xiphophorus_couchianus
ENSDORG00000027343	Rnpc3	96	52.079	ENSXMAG00000006495	rnpc3	98	52.079	Xiphophorus_maculatus