EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000027559 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 60S ribosomal protein L7a pseudogene
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 773 bases
Position: chrKN672510.1:3399308-3400080
Accession: 105998480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000024554	Ribosomal_L7Ae	PF01248.26	4.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000029760	-	687	-	ENSDORP00000024554	228 (aa)	-	UPI000BAD23ED

Gene Model

Click here to download ENSDORG00000027559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000027559's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000027559	-	89	84.834	ENSDORG00000006471	-	100	72.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000027559	-	89	80.569	ENSAPLG00000005247	RPL7A	78	80.569	Anas_platyrhynchos
ENSDORG00000027559	-	63	80.263	ENSANAG00000021362	-	100	80.263	Aotus_nancymaae
ENSDORG00000027559	-	89	73.077	ENSANAG00000035965	-	78	73.077	Aotus_nancymaae
ENSDORG00000027559	-	89	74.882	ENSAMXG00000012525	rpl7a	79	74.882	Astyanax_mexicanus
ENSDORG00000027559	-	79	75.532	ENSBTAG00000047286	-	83	75.532	Bos_taurus
ENSDORG00000027559	-	63	78.289	ENSCJAG00000044259	-	100	78.289	Callithrix_jacchus
ENSDORG00000027559	-	52	83.740	ENSCJAG00000039516	-	81	83.740	Callithrix_jacchus
ENSDORG00000027559	-	52	84.677	ENSCJAG00000014827	-	59	84.677	Callithrix_jacchus
ENSDORG00000027559	-	82	77.949	ENSCJAG00000048127	-	100	66.541	Callithrix_jacchus
ENSDORG00000027559	-	61	80.822	ENSCJAG00000040821	-	99	80.822	Callithrix_jacchus
ENSDORG00000027559	-	89	75.962	ENSCHIG00000023018	-	77	75.962	Capra_hircus
ENSDORG00000027559	-	61	73.050	ENSTSYG00000029336	-	100	73.050	Carlito_syrichta
ENSDORG00000027559	-	89	73.934	ENSCCAG00000033718	-	79	73.934	Cebus_capucinus
ENSDORG00000027559	-	52	56.349	ENSCCAG00000035068	-	85	56.349	Cebus_capucinus
ENSDORG00000027559	-	61	82.993	ENSCATG00000032659	-	100	82.993	Cercocebus_atys
ENSDORG00000027559	-	60	80.690	ENSCATG00000031343	-	96	80.690	Cercocebus_atys
ENSDORG00000027559	-	89	82.938	ENSCSAG00000019115	-	79	82.938	Chlorocebus_sabaeus
ENSDORG00000027559	-	82	69.231	ENSCSAG00000018485	-	79	70.616	Chlorocebus_sabaeus
ENSDORG00000027559	-	89	77.619	ENSCSAG00000018506	-	79	77.619	Chlorocebus_sabaeus
ENSDORG00000027559	-	89	74.408	ENSCSAG00000005053	-	79	74.408	Chlorocebus_sabaeus
ENSDORG00000027559	-	89	81.517	ENSCPBG00000021161	-	79	81.517	Chrysemys_picta_bellii
ENSDORG00000027559	-	82	82.564	ENSCGRG00001020617	-	100	73.047	Cricetulus_griseus_chok1gshd
ENSDORG00000027559	-	84	77.387	ENSCGRG00000003429	-	100	64.615	Cricetulus_griseus_crigri
ENSDORG00000027559	-	89	77.251	ENSDARG00000019230	rpl7a	79	77.251	Danio_rerio
ENSDORG00000027559	-	85	59.091	ENSDNOG00000030713	-	79	59.091	Dasypus_novemcinctus
ENSDORG00000027559	-	89	53.846	ENSEBUG00000015826	rpl7a	77	53.846	Eptatretus_burgeri
ENSDORG00000027559	-	89	76.303	ENSELUG00000023023	rpl7a	79	76.303	Esox_lucius
ENSDORG00000027559	-	68	67.081	ENSFCAG00000026737	-	95	67.081	Felis_catus
ENSDORG00000027559	-	81	68.783	ENSFCAG00000029566	-	94	68.783	Felis_catus
ENSDORG00000027559	-	89	80.569	ENSFALG00000001502	-	70	80.569	Ficedula_albicollis
ENSDORG00000027559	-	89	80.569	ENSGAGG00000010277	-	76	80.569	Gopherus_agassizii
ENSDORG00000027559	-	63	80.921	ENSGGOG00000023680	-	100	80.921	Gorilla_gorilla
ENSDORG00000027559	-	60	81.507	ENSGGOG00000025516	-	95	81.507	Gorilla_gorilla
ENSDORG00000027559	-	89	74.038	ENSGGOG00000026585	-	95	72.632	Gorilla_gorilla
ENSDORG00000027559	-	89	68.095	ENSHGLG00000012167	-	98	60.853	Heterocephalus_glaber_female
ENSDORG00000027559	-	89	70.673	ENSHGLG00000018482	-	100	62.646	Heterocephalus_glaber_female
ENSDORG00000027559	-	89	83.886	ENSHGLG00000013590	RPL7A	79	83.886	Heterocephalus_glaber_female
ENSDORG00000027559	-	89	68.095	ENSHGLG00100007133	-	98	60.853	Heterocephalus_glaber_male
ENSDORG00000027559	-	89	70.673	ENSHGLG00100004197	-	100	62.646	Heterocephalus_glaber_male
ENSDORG00000027559	-	89	83.886	ENSHGLG00100007783	RPL7A	79	83.886	Heterocephalus_glaber_male
ENSDORG00000027559	-	89	74.882	ENSIPUG00000008146	rpl7a	100	63.534	Ictalurus_punctatus
ENSDORG00000027559	-	82	74.346	ENSSTOG00000031997	-	100	62.753	Ictidomys_tridecemlineatus
ENSDORG00000027559	-	62	72.109	ENSJJAG00000016802	-	99	72.109	Jaculus_jaculus
ENSDORG00000027559	-	89	59.813	ENSJJAG00000022569	-	76	59.813	Jaculus_jaculus
ENSDORG00000027559	-	86	64.677	ENSJJAG00000012899	-	79	64.677	Jaculus_jaculus
ENSDORG00000027559	-	85	79.798	ENSJJAG00000024026	-	100	66.926	Jaculus_jaculus
ENSDORG00000027559	-	89	72.115	ENSJJAG00000014376	-	100	62.357	Jaculus_jaculus
ENSDORG00000027559	-	89	76.303	ENSLACG00000018224	rpl7a	76	76.303	Latimeria_chalumnae
ENSDORG00000027559	-	89	83.886	ENSLAFG00000006436	-	94	83.246	Loxodonta_africana
ENSDORG00000027559	-	89	83.412	ENSMFAG00000027988	-	79	83.412	Macaca_fascicularis
ENSDORG00000027559	-	100	73.828	ENSMFAG00000044607	-	100	73.828	Macaca_fascicularis
ENSDORG00000027559	-	63	78.947	ENSMMUG00000012379	-	100	78.947	Macaca_mulatta
ENSDORG00000027559	-	100	73.828	ENSMMUG00000049182	-	100	80.263	Macaca_mulatta
ENSDORG00000027559	-	89	82.692	ENSMNEG00000025946	-	100	71.103	Macaca_nemestrina
ENSDORG00000027559	-	89	83.886	ENSMNEG00000005027	-	79	83.886	Macaca_nemestrina
ENSDORG00000027559	-	60	83.333	ENSMNEG00000037496	-	99	83.333	Macaca_nemestrina
ENSDORG00000027559	-	82	77.083	ENSMLEG00000012582	-	79	77.885	Mandrillus_leucophaeus
ENSDORG00000027559	-	60	71.034	ENSMAUG00000019197	-	96	71.034	Mesocricetus_auratus
ENSDORG00000027559	-	61	82.192	ENSMICG00000026491	-	95	82.192	Microcebus_murinus
ENSDORG00000027559	-	89	82.938	ENSMOCG00000008541	-	100	71.429	Microtus_ochrogaster
ENSDORG00000027559	-	85	64.677	ENSMPUG00000003699	-	75	64.677	Mustela_putorius_furo
ENSDORG00000027559	-	89	60.476	ENSMPUG00000009401	-	80	60.476	Mustela_putorius_furo
ENSDORG00000027559	-	89	57.346	ENSMPUG00000012594	-	79	57.346	Mustela_putorius_furo
ENSDORG00000027559	-	89	68.246	ENSMPUG00000017429	-	78	68.246	Mustela_putorius_furo
ENSDORG00000027559	-	52	85.484	ENSMPUG00000012398	-	89	85.484	Mustela_putorius_furo
ENSDORG00000027559	-	89	81.043	ENSNLEG00000030504	-	79	81.043	Nomascus_leucogenys
ENSDORG00000027559	-	82	75.000	ENSNLEG00000030063	-	79	75.962	Nomascus_leucogenys
ENSDORG00000027559	-	63	80.263	ENSNLEG00000030901	-	100	80.263	Nomascus_leucogenys
ENSDORG00000027559	-	89	80.569	ENSMEUG00000014550	-	79	80.569	Notamacropus_eugenii
ENSDORG00000027559	-	81	79.275	ENSOANG00000007060	-	74	79.275	Ornithorhynchus_anatinus
ENSDORG00000027559	-	89	80.095	ENSOCUG00000022874	-	100	69.434	Oryctolagus_cuniculus
ENSDORG00000027559	-	89	65.714	ENSOCUG00000027027	-	95	65.714	Oryctolagus_cuniculus
ENSDORG00000027559	-	89	67.464	ENSOCUG00000025450	-	90	67.464	Oryctolagus_cuniculus
ENSDORG00000027559	-	74	60.227	ENSOGAG00000029360	-	69	60.227	Otolemur_garnettii
ENSDORG00000027559	-	89	81.043	ENSOGAG00000007682	-	79	81.043	Otolemur_garnettii
ENSDORG00000027559	-	89	76.168	ENSOARG00000003677	-	100	66.171	Ovis_aries
ENSDORG00000027559	-	89	78.199	ENSOARG00000004560	-	78	78.199	Ovis_aries
ENSDORG00000027559	-	63	77.632	ENSPPAG00000035063	-	100	77.632	Pan_paniscus
ENSDORG00000027559	-	89	75.481	ENSPPAG00000029689	-	80	75.481	Pan_paniscus
ENSDORG00000027559	-	100	64.179	ENSPPAG00000030172	-	95	80.137	Pan_paniscus
ENSDORG00000027559	-	89	75.962	ENSPPAG00000037938	-	95	74.611	Pan_paniscus
ENSDORG00000027559	-	61	69.014	ENSPPRG00000008233	-	95	69.014	Panthera_pardus
ENSDORG00000027559	-	63	77.632	ENSPTRG00000049410	-	100	77.632	Pan_troglodytes
ENSDORG00000027559	-	89	75.000	ENSPTRG00000051913	-	78	75.000	Pan_troglodytes
ENSDORG00000027559	-	89	75.481	ENSPTRG00000047886	-	80	75.481	Pan_troglodytes
ENSDORG00000027559	-	73	79.885	ENSPTRG00000044655	-	96	79.885	Pan_troglodytes
ENSDORG00000027559	-	82	82.564	ENSPTRG00000029310	-	79	82.938	Pan_troglodytes
ENSDORG00000027559	-	60	82.759	ENSPANG00000003750	-	96	82.759	Papio_anubis
ENSDORG00000027559	-	61	80.952	ENSPANG00000034498	-	100	80.952	Papio_anubis
ENSDORG00000027559	-	61	80.822	ENSPEMG00000013592	-	99	80.822	Peromyscus_maniculatus_bairdii
ENSDORG00000027559	-	89	71.154	ENSPCIG00000026434	-	78	71.154	Phascolarctos_cinereus
ENSDORG00000027559	-	89	72.038	ENSPCOG00000004337	-	92	70.466	Propithecus_coquereli
ENSDORG00000027559	-	89	75.829	ENSPNAG00000029194	rpl7a	99	74.658	Pygocentrus_nattereri
ENSDORG00000027559	-	89	81.517	ENSRNOG00000029423	AABR07052519.1	79	81.517	Rattus_norvegicus
ENSDORG00000027559	-	89	80.095	ENSRNOG00000029130	AABR07057586.1	79	80.095	Rattus_norvegicus
ENSDORG00000027559	-	89	71.154	ENSRNOG00000014425	AABR07054456.1	79	71.154	Rattus_norvegicus
ENSDORG00000027559	-	89	81.043	ENSRNOG00000028826	AC128901.1	79	81.043	Rattus_norvegicus
ENSDORG00000027559	-	100	67.857	ENSRNOG00000022718	AC094246.2	100	67.857	Rattus_norvegicus
ENSDORG00000027559	-	89	80.095	ENSRNOG00000031532	AABR07018167.1	79	80.095	Rattus_norvegicus
ENSDORG00000027559	-	89	81.043	ENSRNOG00000031902	AABR07027819.1	100	70.229	Rattus_norvegicus
ENSDORG00000027559	-	89	82.464	ENSRNOG00000033652	AABR07045321.1	79	82.464	Rattus_norvegicus
ENSDORG00000027559	-	89	80.095	ENSRNOG00000029310	AABR07049918.1	79	80.095	Rattus_norvegicus
ENSDORG00000027559	-	60	82.639	ENSRBIG00000007002	-	92	82.639	Rhinopithecus_bieti
ENSDORG00000027559	-	75	75.000	ENSRBIG00000037343	-	72	76.136	Rhinopithecus_bieti
ENSDORG00000027559	-	89	79.621	ENSRBIG00000010998	-	100	68.421	Rhinopithecus_bieti
ENSDORG00000027559	-	75	75.000	ENSRROG00000041577	-	72	76.136	Rhinopithecus_roxellana
ENSDORG00000027559	-	61	82.192	ENSRROG00000035341	-	95	82.192	Rhinopithecus_roxellana
ENSDORG00000027559	-	82	70.256	ENSSBOG00000033255	-	80	71.090	Saimiri_boliviensis_boliviensis
ENSDORG00000027559	-	86	48.259	ENSSSCG00000034232	-	93	64.865	Sus_scrofa
ENSDORG00000027559	-	89	80.569	ENSTGUG00000005463	-	78	80.569	Taeniopygia_guttata
ENSDORG00000027559	-	89	75.829	ENSTNIG00000007501	rpl7a	78	75.829	Tetraodon_nigroviridis
ENSDORG00000027559	-	61	67.586	ENSTBEG00000003344	-	97	67.586	Tupaia_belangeri