EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000027706 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 381 bases
Position: chrKN672435.1:8738004-8738384
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000024082	LSM	PF01423.22	6.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000025396	-	381	-	ENSDORP00000024082	126 (aa)	-	UPI000BAD074B

Gene Model

Click here to download ENSDORG00000027706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000027706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000027706	-	58	31.081	ENSDORG00000024225	Lsm4	78	31.624
ENSDORG00000027706	-	100	66.667	ENSDORG00000027169	-	100	66.667
ENSDORG00000027706	-	87	80.909	ENSDORG00000002800	-	100	80.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000027706	-	100	84.921	ENSG00000100028	SNRPD3	98	88.525	Homo_sapiens
ENSDORG00000027706	-	100	81.890	ENSAPOG00000007512	snrpd3l	100	84.252	Acanthochromis_polyacanthus
ENSDORG00000027706	-	100	84.921	ENSAMEG00000013935	SNRPD3	100	84.921	Ailuropoda_melanoleuca
ENSDORG00000027706	-	100	81.890	ENSACIG00000008871	snrpd3l	100	84.252	Amphilophus_citrinellus
ENSDORG00000027706	-	100	81.890	ENSAOCG00000022442	-	100	84.252	Amphiprion_ocellaris
ENSDORG00000027706	-	100	81.890	ENSAOCG00000008497	SNRPD3	100	84.252	Amphiprion_ocellaris
ENSDORG00000027706	-	100	81.890	ENSAOCG00000016743	snrpd3l	100	84.252	Amphiprion_ocellaris
ENSDORG00000027706	-	84	85.849	ENSAOCG00000016759	-	98	85.849	Amphiprion_ocellaris
ENSDORG00000027706	-	100	81.890	ENSAPEG00000006273	snrpd3l	100	84.252	Amphiprion_percula
ENSDORG00000027706	-	84	85.849	ENSAPEG00000006260	-	98	85.849	Amphiprion_percula
ENSDORG00000027706	-	100	81.890	ENSATEG00000020556	snrpd3l	91	84.252	Anabas_testudineus
ENSDORG00000027706	-	100	84.921	ENSAPLG00000008670	SNRPD3	100	84.921	Anas_platyrhynchos
ENSDORG00000027706	-	100	84.921	ENSANAG00000026106	SNRPD3	100	84.921	Aotus_nancymaae
ENSDORG00000027706	-	100	81.890	ENSACLG00000021295	snrpd3l	100	84.252	Astatotilapia_calliptera
ENSDORG00000027706	-	100	78.125	ENSAMXG00000038984	snrpd3l	100	80.469	Astyanax_mexicanus
ENSDORG00000027706	-	100	84.921	ENSBTAG00000021262	SNRPD3	100	84.921	Bos_taurus
ENSDORG00000027706	-	94	50.806	WBGene00004914	snr-1	87	50.806	Caenorhabditis_elegans
ENSDORG00000027706	-	100	84.921	ENSCJAG00000009630	SNRPD3	100	84.921	Callithrix_jacchus
ENSDORG00000027706	-	100	84.127	ENSCAFG00000017258	-	100	84.127	Canis_familiaris
ENSDORG00000027706	-	100	84.921	ENSCAFG00000013864	-	100	84.921	Canis_familiaris
ENSDORG00000027706	-	100	84.921	ENSCAFG00020007165	-	100	84.921	Canis_lupus_dingo
ENSDORG00000027706	-	100	84.921	ENSCHIG00000000057	SNRPD3	100	84.921	Capra_hircus
ENSDORG00000027706	-	100	84.921	ENSTSYG00000007649	SNRPD3	100	84.921	Carlito_syrichta
ENSDORG00000027706	-	100	84.921	ENSCAPG00000016432	-	100	84.921	Cavia_aperea
ENSDORG00000027706	-	100	84.921	ENSCPOG00000033102	-	100	84.921	Cavia_porcellus
ENSDORG00000027706	-	100	84.921	ENSCCAG00000035006	SNRPD3	100	84.921	Cebus_capucinus
ENSDORG00000027706	-	100	84.921	ENSCATG00000038878	SNRPD3	100	84.921	Cercocebus_atys
ENSDORG00000027706	-	100	84.921	ENSCLAG00000011403	SNRPD3	100	84.921	Chinchilla_lanigera
ENSDORG00000027706	-	100	84.921	ENSCSAG00000010694	SNRPD3	100	84.921	Chlorocebus_sabaeus
ENSDORG00000027706	-	100	84.921	ENSCPBG00000002065	SNRPD3	100	84.921	Chrysemys_picta_bellii
ENSDORG00000027706	-	85	67.290	ENSCSAVG00000004708	-	84	66.372	Ciona_savignyi
ENSDORG00000027706	-	100	84.921	ENSCANG00000032106	SNRPD3	100	84.921	Colobus_angolensis_palliatus
ENSDORG00000027706	-	100	84.921	ENSCGRG00001021990	Snrpd3	100	84.921	Cricetulus_griseus_chok1gshd
ENSDORG00000027706	-	100	84.921	ENSCGRG00000004280	Snrpd3	100	84.921	Cricetulus_griseus_crigri
ENSDORG00000027706	-	100	80.315	ENSCVAG00000001276	snrpd3l	100	82.677	Cyprinodon_variegatus
ENSDORG00000027706	-	100	80.469	ENSDARG00000076283	snrpd3l	100	81.250	Danio_rerio
ENSDORG00000027706	-	100	77.165	ENSDARG00000013800	snrpd3	100	79.528	Danio_rerio
ENSDORG00000027706	-	97	72.131	ENSDNOG00000042638	-	100	72.131	Dasypus_novemcinctus
ENSDORG00000027706	-	100	79.070	ENSDNOG00000018004	-	100	79.070	Dasypus_novemcinctus
ENSDORG00000027706	-	100	84.921	ENSDNOG00000047424	-	100	84.921	Dasypus_novemcinctus
ENSDORG00000027706	-	84	73.585	FBgn0023167	SmD3	81	69.672	Drosophila_melanogaster
ENSDORG00000027706	-	100	84.921	ENSEASG00005000273	SNRPD3	100	84.921	Equus_asinus_asinus
ENSDORG00000027706	-	100	84.921	ENSECAG00000023316	SNRPD3	100	84.921	Equus_caballus
ENSDORG00000027706	-	100	80.952	ENSEEUG00000015518	SNRPD3	100	83.333	Erinaceus_europaeus
ENSDORG00000027706	-	100	79.528	ENSELUG00000001854	snrpd3	100	81.890	Esox_lucius
ENSDORG00000027706	-	100	81.102	ENSELUG00000010092	snrpd3l	100	83.465	Esox_lucius
ENSDORG00000027706	-	100	84.921	ENSFCAG00000001512	SNRPD3	100	84.921	Felis_catus
ENSDORG00000027706	-	100	84.921	ENSFALG00000007303	SNRPD3	100	84.921	Ficedula_albicollis
ENSDORG00000027706	-	100	84.921	ENSFDAG00000010772	SNRPD3	100	84.921	Fukomys_damarensis
ENSDORG00000027706	-	100	81.102	ENSFHEG00000010754	snrpd3l	100	83.465	Fundulus_heteroclitus
ENSDORG00000027706	-	100	81.250	ENSGMOG00000008469	snrpd3l	100	83.594	Gadus_morhua
ENSDORG00000027706	-	100	84.921	ENSGALG00000006596	SNRPD3	100	84.921	Gallus_gallus
ENSDORG00000027706	-	84	85.849	ENSGAFG00000006661	snrpd3l	82	85.849	Gambusia_affinis
ENSDORG00000027706	-	100	81.250	ENSGACG00000017533	snrpd3l	100	83.594	Gasterosteus_aculeatus
ENSDORG00000027706	-	100	84.921	ENSGAGG00000023325	SNRPD3	100	84.921	Gopherus_agassizii
ENSDORG00000027706	-	100	84.921	ENSGGOG00000015640	SNRPD3	100	84.921	Gorilla_gorilla
ENSDORG00000027706	-	100	81.890	ENSHBUG00000001332	snrpd3l	100	84.252	Haplochromis_burtoni
ENSDORG00000027706	-	99	84.000	ENSHGLG00000009844	-	99	84.000	Heterocephalus_glaber_female
ENSDORG00000027706	-	100	84.921	ENSHGLG00000016496	SNRPD3	100	84.921	Heterocephalus_glaber_female
ENSDORG00000027706	-	100	84.921	ENSHGLG00100019304	SNRPD3	100	84.921	Heterocephalus_glaber_male
ENSDORG00000027706	-	99	84.000	ENSHGLG00100011326	-	99	84.000	Heterocephalus_glaber_male
ENSDORG00000027706	-	100	81.102	ENSHCOG00000014396	snrpd3l	100	83.465	Hippocampus_comes
ENSDORG00000027706	-	100	80.469	ENSIPUG00000003083	snrpd3	100	81.250	Ictalurus_punctatus
ENSDORG00000027706	-	100	84.921	ENSSTOG00000025674	SNRPD3	100	84.921	Ictidomys_tridecemlineatus
ENSDORG00000027706	-	100	84.921	ENSJJAG00000013303	Snrpd3	100	84.921	Jaculus_jaculus
ENSDORG00000027706	-	100	81.102	ENSKMAG00000012493	snrpd3l	100	83.465	Kryptolebias_marmoratus
ENSDORG00000027706	-	100	81.890	ENSLBEG00000003202	snrpd3l	100	84.252	Labrus_bergylta
ENSDORG00000027706	-	100	84.127	ENSLACG00000015192	SNRPD3	100	84.127	Latimeria_chalumnae
ENSDORG00000027706	-	100	81.890	ENSLOCG00000006978	snrpd3	100	84.252	Lepisosteus_oculatus
ENSDORG00000027706	-	100	84.921	ENSLAFG00000028180	SNRPD3	100	84.921	Loxodonta_africana
ENSDORG00000027706	-	100	84.921	ENSMFAG00000033628	SNRPD3	100	84.921	Macaca_fascicularis
ENSDORG00000027706	-	100	84.921	ENSMMUG00000000264	SNRPD3	100	84.921	Macaca_mulatta
ENSDORG00000027706	-	100	84.921	ENSMNEG00000020857	SNRPD3	100	84.921	Macaca_nemestrina
ENSDORG00000027706	-	100	84.921	ENSMLEG00000037548	SNRPD3	100	84.921	Mandrillus_leucophaeus
ENSDORG00000027706	-	100	81.890	ENSMZEG00005017664	snrpd3l	100	84.252	Maylandia_zebra
ENSDORG00000027706	-	100	84.921	ENSMAUG00000021393	Snrpd3	100	84.921	Mesocricetus_auratus
ENSDORG00000027706	-	100	84.921	ENSMICG00000034782	SNRPD3	100	84.921	Microcebus_murinus
ENSDORG00000027706	-	100	84.921	ENSMOCG00000009361	Snrpd3	100	84.921	Microtus_ochrogaster
ENSDORG00000027706	-	84	85.849	ENSMMOG00000020985	snrpd3l	67	85.849	Mola_mola
ENSDORG00000027706	-	100	84.921	ENSMODG00000004024	SNRPD3	100	84.921	Monodelphis_domestica
ENSDORG00000027706	-	100	81.890	ENSMALG00000013334	snrpd3l	100	84.252	Monopterus_albus
ENSDORG00000027706	-	100	84.921	MGP_CAROLIEiJ_G0015441	Snrpd3	100	84.921	Mus_caroli
ENSDORG00000027706	-	100	84.921	ENSMUSG00000020180	Snrpd3	100	84.921	Mus_musculus
ENSDORG00000027706	-	100	84.921	MGP_PahariEiJ_G0030857	Snrpd3	100	84.921	Mus_pahari
ENSDORG00000027706	-	100	84.921	MGP_SPRETEiJ_G0016254	Snrpd3	100	84.921	Mus_spretus
ENSDORG00000027706	-	100	84.921	ENSMPUG00000002889	SNRPD3	100	84.921	Mustela_putorius_furo
ENSDORG00000027706	-	100	84.921	ENSMLUG00000009838	SNRPD3	100	84.921	Myotis_lucifugus
ENSDORG00000027706	-	100	84.921	ENSNGAG00000010328	Snrpd3	100	84.921	Nannospalax_galili
ENSDORG00000027706	-	100	81.890	ENSNBRG00000020307	snrpd3l	100	84.252	Neolamprologus_brichardi
ENSDORG00000027706	-	100	84.921	ENSNLEG00000035757	SNRPD3	100	84.921	Nomascus_leucogenys
ENSDORG00000027706	-	100	84.921	ENSMEUG00000003772	SNRPD3	100	84.921	Notamacropus_eugenii
ENSDORG00000027706	-	100	84.921	ENSOPRG00000005763	SNRPD3	100	84.921	Ochotona_princeps
ENSDORG00000027706	-	100	84.921	ENSODEG00000008064	-	100	84.921	Octodon_degus
ENSDORG00000027706	-	100	82.540	ENSODEG00000020162	-	100	82.540	Octodon_degus
ENSDORG00000027706	-	100	84.127	ENSODEG00000019354	-	100	84.127	Octodon_degus
ENSDORG00000027706	-	100	81.890	ENSONIG00000003828	snrpd3l	100	84.252	Oreochromis_niloticus
ENSDORG00000027706	-	100	84.921	ENSOANG00000002463	SNRPD3	100	84.921	Ornithorhynchus_anatinus
ENSDORG00000027706	-	100	84.921	ENSOCUG00000004845	SNRPD3	100	84.921	Oryctolagus_cuniculus
ENSDORG00000027706	-	100	81.890	ENSORLG00000010586	snrpd3l	100	84.252	Oryzias_latipes
ENSDORG00000027706	-	100	81.890	ENSORLG00020011769	snrpd3l	100	84.252	Oryzias_latipes_hni
ENSDORG00000027706	-	100	81.890	ENSORLG00015022940	snrpd3l	100	84.252	Oryzias_latipes_hsok
ENSDORG00000027706	-	100	81.102	ENSOMEG00000022734	snrpd3l	100	83.465	Oryzias_melastigma
ENSDORG00000027706	-	100	84.921	ENSOGAG00000012708	SNRPD3	100	84.921	Otolemur_garnettii
ENSDORG00000027706	-	100	84.921	ENSOARG00000013984	SNRPD3	100	84.921	Ovis_aries
ENSDORG00000027706	-	100	84.921	ENSPPAG00000039191	SNRPD3	100	84.921	Pan_paniscus
ENSDORG00000027706	-	100	84.921	ENSPPRG00000001470	SNRPD3	100	84.921	Panthera_pardus
ENSDORG00000027706	-	100	84.921	ENSPTIG00000016610	SNRPD3	100	84.921	Panthera_tigris_altaica
ENSDORG00000027706	-	100	84.921	ENSPTRG00000014176	SNRPD3	100	84.921	Pan_troglodytes
ENSDORG00000027706	-	100	84.921	ENSPANG00000009279	SNRPD3	100	84.921	Papio_anubis
ENSDORG00000027706	-	100	79.528	ENSPKIG00000006412	snrpd3l	100	81.890	Paramormyrops_kingsleyae
ENSDORG00000027706	-	100	83.333	ENSPSIG00000010022	-	100	83.333	Pelodiscus_sinensis
ENSDORG00000027706	-	97	80.328	ENSPMGG00000004486	snrpd3l	99	82.927	Periophthalmus_magnuspinnatus
ENSDORG00000027706	-	100	84.921	ENSPCIG00000010910	SNRPD3	84	84.921	Phascolarctos_cinereus
ENSDORG00000027706	-	100	81.102	ENSPFOG00000019673	snrpd3l	100	83.465	Poecilia_formosa
ENSDORG00000027706	-	100	81.102	ENSPLAG00000023249	snrpd3l	100	83.465	Poecilia_latipinna
ENSDORG00000027706	-	100	81.102	ENSPMEG00000008482	snrpd3l	100	83.465	Poecilia_mexicana
ENSDORG00000027706	-	84	85.849	ENSPREG00000007532	snrpd3l	87	85.849	Poecilia_reticulata
ENSDORG00000027706	-	100	84.921	ENSPPYG00000011648	SNRPD3	100	84.921	Pongo_abelii
ENSDORG00000027706	-	100	84.921	ENSPCAG00000002065	SNRPD3	100	84.921	Procavia_capensis
ENSDORG00000027706	-	100	84.921	ENSPCOG00000011842	SNRPD3	100	84.921	Propithecus_coquereli
ENSDORG00000027706	-	100	84.127	ENSPVAG00000011405	SNRPD3	100	84.127	Pteropus_vampyrus
ENSDORG00000027706	-	100	81.890	ENSPNYG00000013344	snrpd3l	100	84.252	Pundamilia_nyererei
ENSDORG00000027706	-	100	77.344	ENSPNAG00000008683	snrpd3l	100	79.688	Pygocentrus_nattereri
ENSDORG00000027706	-	100	77.953	ENSPNAG00000010547	snrpd3	100	80.315	Pygocentrus_nattereri
ENSDORG00000027706	-	100	84.921	ENSRNOG00000050410	Snrpd3	100	84.921	Rattus_norvegicus
ENSDORG00000027706	-	100	84.921	ENSRBIG00000029017	SNRPD3	100	84.921	Rhinopithecus_bieti
ENSDORG00000027706	-	100	84.921	ENSRROG00000031152	SNRPD3	100	84.921	Rhinopithecus_roxellana
ENSDORG00000027706	-	64	46.914	YLR147C	SMD3	80	46.914	Saccharomyces_cerevisiae
ENSDORG00000027706	-	100	79.528	ENSSFOG00015007002	snrpd3l	100	81.890	Scleropages_formosus
ENSDORG00000027706	-	100	79.528	ENSSFOG00015014180	snrpd3l	100	81.890	Scleropages_formosus
ENSDORG00000027706	-	100	81.890	ENSSMAG00000019307	snrpd3l	100	84.252	Scophthalmus_maximus
ENSDORG00000027706	-	100	81.890	ENSSDUG00000006870	snrpd3l	100	84.252	Seriola_dumerili
ENSDORG00000027706	-	100	81.890	ENSSLDG00000022664	snrpd3l	100	84.252	Seriola_lalandi_dorsalis
ENSDORG00000027706	-	100	84.921	ENSSARG00000002357	SNRPD3	100	84.921	Sorex_araneus
ENSDORG00000027706	-	100	84.127	ENSSPUG00000014285	SNRPD3	100	84.127	Sphenodon_punctatus
ENSDORG00000027706	-	100	84.921	ENSSSCG00000010058	SNRPD3	100	84.921	Sus_scrofa
ENSDORG00000027706	-	100	84.921	ENSTGUG00000010079	SNRPD3	100	84.921	Taeniopygia_guttata
ENSDORG00000027706	-	84	85.849	ENSTRUG00000023976	snrpd3l	90	85.849	Takifugu_rubripes
ENSDORG00000027706	-	100	81.102	ENSTNIG00000005323	snrpd3l	100	83.465	Tetraodon_nigroviridis
ENSDORG00000027706	-	100	84.921	ENSTBEG00000014334	SNRPD3	100	84.921	Tupaia_belangeri
ENSDORG00000027706	-	100	84.921	ENSTTRG00000006022	SNRPD3	100	84.921	Tursiops_truncatus
ENSDORG00000027706	-	100	84.921	ENSUAMG00000010767	SNRPD3	100	84.921	Ursus_americanus
ENSDORG00000027706	-	100	84.921	ENSUMAG00000001670	SNRPD3	100	84.921	Ursus_maritimus
ENSDORG00000027706	-	100	84.921	ENSVPAG00000000241	SNRPD3	100	84.921	Vicugna_pacos
ENSDORG00000027706	-	84	85.849	ENSVVUG00000019340	SNRPD3	53	85.849	Vulpes_vulpes
ENSDORG00000027706	-	100	70.312	ENSXETG00000024918	snrpd3	100	70.543	Xenopus_tropicalis
ENSDORG00000027706	-	100	81.102	ENSXCOG00000004795	snrpd3l	100	83.465	Xiphophorus_couchianus
ENSDORG00000027706	-	100	81.102	ENSXMAG00000001133	snrpd3l	100	83.465	Xiphophorus_maculatus