EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000028216 (Gene tree)
Gene ID: 105982233
Gene Symbol: Thumpd1
Alias: -
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 7629 bases
Position: chrKN672360.1:93664-101292
Accession: 105982233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000027853	THUMP	PF02926.17	3.6e-24	1	1
ENSDORP00000023639	THUMP	PF02926.17	3.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000034952	-	1074	-	ENSDORP00000027853	357 (aa)	-	UPI000BACFC3F
ENSDORT00000027830	-	1547	XM_013011773	ENSDORP00000023639	359 (aa)	XP_012867227	A0A1S3EUX6

Gene Model

Click here to download ENSDORG00000028216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000028216's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000028216	Thumpd1	99	81.586	ENSG00000066654	THUMPD1	99	81.586	Homo_sapiens
ENSDORG00000028216	Thumpd1	73	59.004	ENSAPOG00000008440	thumpd1	85	59.387	Acanthochromis_polyacanthus
ENSDORG00000028216	Thumpd1	99	82.633	ENSAMEG00000006257	THUMPD1	99	82.094	Ailuropoda_melanoleuca
ENSDORG00000028216	Thumpd1	73	59.073	ENSACIG00000024395	thumpd1	76	59.690	Amphilophus_citrinellus
ENSDORG00000028216	Thumpd1	72	58.462	ENSAOCG00000003509	thumpd1	79	60.078	Amphiprion_ocellaris
ENSDORG00000028216	Thumpd1	72	58.462	ENSAPEG00000010515	thumpd1	79	60.078	Amphiprion_percula
ENSDORG00000028216	Thumpd1	72	58.915	ENSATEG00000004737	thumpd1	80	60.078	Anabas_testudineus
ENSDORG00000028216	Thumpd1	70	79.518	ENSAPLG00000015259	THUMPD1	87	79.920	Anas_platyrhynchos
ENSDORG00000028216	Thumpd1	53	63.874	ENSACAG00000022881	-	95	63.874	Anolis_carolinensis
ENSDORG00000028216	Thumpd1	78	67.944	ENSACAG00000009625	-	89	68.641	Anolis_carolinensis
ENSDORG00000028216	Thumpd1	99	81.586	ENSANAG00000026882	-	99	81.586	Aotus_nancymaae
ENSDORG00000028216	Thumpd1	100	65.922	ENSANAG00000027040	-	98	66.289	Aotus_nancymaae
ENSDORG00000028216	Thumpd1	98	65.812	ENSANAG00000027311	-	99	65.812	Aotus_nancymaae
ENSDORG00000028216	Thumpd1	73	57.088	ENSACLG00000004830	thumpd1	79	60.078	Astatotilapia_calliptera
ENSDORG00000028216	Thumpd1	75	61.798	ENSAMXG00000012356	thumpd1	79	61.798	Astyanax_mexicanus
ENSDORG00000028216	Thumpd1	99	81.180	ENSBTAG00000047673	THUMPD1	100	80.663	Bos_taurus
ENSDORG00000028216	Thumpd1	96	81.977	ENSCJAG00000009499	THUMPD1	99	81.020	Callithrix_jacchus
ENSDORG00000028216	Thumpd1	100	82.369	ENSCAFG00000017985	THUMPD1	99	82.369	Canis_familiaris
ENSDORG00000028216	Thumpd1	100	82.369	ENSCAFG00020021861	THUMPD1	99	82.369	Canis_lupus_dingo
ENSDORG00000028216	Thumpd1	99	80.899	ENSCHIG00000010134	THUMPD1	99	80.387	Capra_hircus
ENSDORG00000028216	Thumpd1	100	80.833	ENSTSYG00000011537	THUMPD1	100	80.833	Carlito_syrichta
ENSDORG00000028216	Thumpd1	96	80.870	ENSCPOG00000008919	-	100	79.722	Cavia_porcellus
ENSDORG00000028216	Thumpd1	96	80.870	ENSCPOG00000023684	-	100	79.722	Cavia_porcellus
ENSDORG00000028216	Thumpd1	100	80.501	ENSCCAG00000030205	THUMPD1	100	80.501	Cebus_capucinus
ENSDORG00000028216	Thumpd1	100	74.652	ENSCCAG00000019379	-	86	74.652	Cebus_capucinus
ENSDORG00000028216	Thumpd1	99	67.507	ENSCATG00000020844	-	99	67.036	Cercocebus_atys
ENSDORG00000028216	Thumpd1	99	81.020	ENSCATG00000040309	THUMPD1	99	81.020	Cercocebus_atys
ENSDORG00000028216	Thumpd1	100	80.501	ENSCLAG00000016508	THUMPD1	100	80.501	Chinchilla_lanigera
ENSDORG00000028216	Thumpd1	100	63.361	ENSCSAG00000009860	-	80	63.361	Chlorocebus_sabaeus
ENSDORG00000028216	Thumpd1	99	80.966	ENSCSAG00000007610	THUMPD1	99	80.447	Chlorocebus_sabaeus
ENSDORG00000028216	Thumpd1	99	82.073	ENSCHOG00000005587	THUMPD1	99	82.073	Choloepus_hoffmanni
ENSDORG00000028216	Thumpd1	77	76.619	ENSCPBG00000019055	THUMPD1	77	77.338	Chrysemys_picta_bellii
ENSDORG00000028216	Thumpd1	87	74.598	ENSCANG00000038770	THUMPD1	100	74.598	Colobus_angolensis_palliatus
ENSDORG00000028216	Thumpd1	88	71.246	ENSCANG00000035822	-	100	71.246	Colobus_angolensis_palliatus
ENSDORG00000028216	Thumpd1	100	80.223	ENSCGRG00001014829	Thumpd1	100	80.223	Cricetulus_griseus_chok1gshd
ENSDORG00000028216	Thumpd1	100	80.223	ENSCGRG00000000060	Thumpd1	100	80.223	Cricetulus_griseus_crigri
ENSDORG00000028216	Thumpd1	78	56.228	ENSCSEG00000002041	thumpd1	88	56.429	Cynoglossus_semilaevis
ENSDORG00000028216	Thumpd1	73	61.776	ENSCVAG00000014960	thumpd1	78	61.776	Cyprinodon_variegatus
ENSDORG00000028216	Thumpd1	68	59.426	ENSDARG00000100264	thumpd1	67	60.084	Danio_rerio
ENSDORG00000028216	Thumpd1	99	83.193	ENSDNOG00000043510	THUMPD1	99	83.193	Dasypus_novemcinctus
ENSDORG00000028216	Thumpd1	83	33.766	FBgn0035532	CG15014	89	34.194	Drosophila_melanogaster
ENSDORG00000028216	Thumpd1	100	72.527	ENSETEG00000002763	THUMPD1	84	72.527	Echinops_telfairi
ENSDORG00000028216	Thumpd1	75	42.960	ENSEBUG00000011011	THUMPD1	74	42.960	Eptatretus_burgeri
ENSDORG00000028216	Thumpd1	54	75.758	ENSEASG00005017428	-	100	75.758	Equus_asinus_asinus
ENSDORG00000028216	Thumpd1	100	80.165	ENSECAG00000005354	THUMPD1	100	80.165	Equus_caballus
ENSDORG00000028216	Thumpd1	99	79.006	ENSEEUG00000011256	THUMPD1	88	78.962	Erinaceus_europaeus
ENSDORG00000028216	Thumpd1	74	61.217	ENSELUG00000013612	thumpd1	61	62.738	Esox_lucius
ENSDORG00000028216	Thumpd1	100	81.818	ENSFCAG00000039296	THUMPD1	100	81.818	Felis_catus
ENSDORG00000028216	Thumpd1	64	80.000	ENSFALG00000014029	THUMPD1	82	80.435	Ficedula_albicollis
ENSDORG00000028216	Thumpd1	73	57.915	ENSFHEG00000013319	thumpd1	74	58.140	Fundulus_heteroclitus
ENSDORG00000028216	Thumpd1	73	61.069	ENSGMOG00000003369	thumpd1	81	61.069	Gadus_morhua
ENSDORG00000028216	Thumpd1	91	53.086	ENSGAFG00000011000	thumpd1	97	53.086	Gambusia_affinis
ENSDORG00000028216	Thumpd1	76	59.779	ENSGACG00000019511	thumpd1	80	60.000	Gasterosteus_aculeatus
ENSDORG00000028216	Thumpd1	90	69.394	ENSGAGG00000008225	THUMPD1	98	69.512	Gopherus_agassizii
ENSDORG00000028216	Thumpd1	99	80.737	ENSGGOG00000005231	-	81	79.282	Gorilla_gorilla
ENSDORG00000028216	Thumpd1	85	63.487	ENSGGOG00000043232	-	99	57.703	Gorilla_gorilla
ENSDORG00000028216	Thumpd1	73	59.459	ENSHBUG00000017996	thumpd1	79	59.690	Haplochromis_burtoni
ENSDORG00000028216	Thumpd1	100	80.556	ENSHGLG00000011001	-	100	80.556	Heterocephalus_glaber_female
ENSDORG00000028216	Thumpd1	60	69.767	ENSHGLG00000000952	-	100	69.767	Heterocephalus_glaber_female
ENSDORG00000028216	Thumpd1	100	81.111	ENSHGLG00100016023	THUMPD1	100	81.111	Heterocephalus_glaber_male
ENSDORG00000028216	Thumpd1	60	69.767	ENSHGLG00100010577	-	100	69.767	Heterocephalus_glaber_male
ENSDORG00000028216	Thumpd1	69	54.878	ENSHCOG00000008618	thumpd1	56	54.878	Hippocampus_comes
ENSDORG00000028216	Thumpd1	78	52.740	ENSIPUG00000012500	thumpd1	74	51.887	Ictalurus_punctatus
ENSDORG00000028216	Thumpd1	100	84.401	ENSSTOG00000007011	THUMPD1	100	84.401	Ictidomys_tridecemlineatus
ENSDORG00000028216	Thumpd1	99	80.453	ENSJJAG00000004295	-	99	80.453	Jaculus_jaculus
ENSDORG00000028216	Thumpd1	78	50.526	ENSKMAG00000009545	thumpd1	76	47.273	Kryptolebias_marmoratus
ENSDORG00000028216	Thumpd1	66	64.957	ENSLBEG00000009349	thumpd1	72	64.957	Labrus_bergylta
ENSDORG00000028216	Thumpd1	74	66.667	ENSLACG00000005833	THUMPD1	78	66.667	Latimeria_chalumnae
ENSDORG00000028216	Thumpd1	75	62.082	ENSLOCG00000000854	thumpd1	84	62.082	Lepisosteus_oculatus
ENSDORG00000028216	Thumpd1	100	78.237	ENSLAFG00000025838	THUMPD1	100	78.237	Loxodonta_africana
ENSDORG00000028216	Thumpd1	88	68.038	ENSMFAG00000041474	-	100	68.038	Macaca_fascicularis
ENSDORG00000028216	Thumpd1	99	81.020	ENSMFAG00000036996	THUMPD1	99	81.020	Macaca_fascicularis
ENSDORG00000028216	Thumpd1	99	81.020	ENSMMUG00000004225	THUMPD1	99	81.020	Macaca_mulatta
ENSDORG00000028216	Thumpd1	88	67.722	ENSMMUG00000038414	-	100	67.722	Macaca_mulatta
ENSDORG00000028216	Thumpd1	99	81.020	ENSMNEG00000020726	THUMPD1	99	81.020	Macaca_nemestrina
ENSDORG00000028216	Thumpd1	88	67.722	ENSMNEG00000038856	-	100	67.722	Macaca_nemestrina
ENSDORG00000028216	Thumpd1	87	69.108	ENSMLEG00000030012	-	99	69.108	Mandrillus_leucophaeus
ENSDORG00000028216	Thumpd1	99	80.737	ENSMLEG00000036436	THUMPD1	99	80.737	Mandrillus_leucophaeus
ENSDORG00000028216	Thumpd1	73	59.459	ENSMAMG00000006858	thumpd1	77	59.073	Mastacembelus_armatus
ENSDORG00000028216	Thumpd1	73	59.459	ENSMZEG00005013693	thumpd1	79	59.690	Maylandia_zebra
ENSDORG00000028216	Thumpd1	52	83.422	ENSMGAG00000010340	THUMPD1	89	83.696	Meleagris_gallopavo
ENSDORG00000028216	Thumpd1	100	80.501	ENSMAUG00000013306	Thumpd1	100	80.501	Mesocricetus_auratus
ENSDORG00000028216	Thumpd1	100	83.287	ENSMICG00000038483	-	100	83.287	Microcebus_murinus
ENSDORG00000028216	Thumpd1	94	67.665	ENSMICG00000030865	-	91	67.365	Microcebus_murinus
ENSDORG00000028216	Thumpd1	100	80.223	ENSMOCG00000003447	Thumpd1	99	80.737	Microtus_ochrogaster
ENSDORG00000028216	Thumpd1	73	57.795	ENSMMOG00000011323	thumpd1	76	57.795	Mola_mola
ENSDORG00000028216	Thumpd1	99	72.087	ENSMODG00000006971	-	98	72.087	Monodelphis_domestica
ENSDORG00000028216	Thumpd1	99	71.816	ENSMODG00000024776	-	99	72.087	Monodelphis_domestica
ENSDORG00000028216	Thumpd1	73	59.846	ENSMALG00000019522	thumpd1	81	59.846	Monopterus_albus
ENSDORG00000028216	Thumpd1	99	80.737	MGP_CAROLIEiJ_G0030382	Thumpd1	99	80.737	Mus_caroli
ENSDORG00000028216	Thumpd1	99	81.020	ENSMUSG00000030942	Thumpd1	99	81.020	Mus_musculus
ENSDORG00000028216	Thumpd1	99	79.887	MGP_PahariEiJ_G0013593	Thumpd1	99	79.887	Mus_pahari
ENSDORG00000028216	Thumpd1	90	79.692	ENSMLUG00000010547	THUMPD1	99	73.816	Myotis_lucifugus
ENSDORG00000028216	Thumpd1	99	82.386	ENSNGAG00000018643	Thumpd1	100	81.844	Nannospalax_galili
ENSDORG00000028216	Thumpd1	73	59.073	ENSNBRG00000006987	thumpd1	74	59.302	Neolamprologus_brichardi
ENSDORG00000028216	Thumpd1	99	80.737	ENSNLEG00000012369	THUMPD1	99	80.737	Nomascus_leucogenys
ENSDORG00000028216	Thumpd1	82	86.111	ENSOPRG00000011342	THUMPD1	70	86.111	Ochotona_princeps
ENSDORG00000028216	Thumpd1	100	78.611	ENSODEG00000012360	THUMPD1	100	78.611	Octodon_degus
ENSDORG00000028216	Thumpd1	73	59.459	ENSONIG00000000146	thumpd1	89	59.459	Oreochromis_niloticus
ENSDORG00000028216	Thumpd1	98	66.209	ENSOANG00000014297	THUMPD1	98	66.209	Ornithorhynchus_anatinus
ENSDORG00000028216	Thumpd1	62	76.018	ENSOCUG00000025354	-	100	76.018	Oryctolagus_cuniculus
ENSDORG00000028216	Thumpd1	98	82.808	ENSOCUG00000009895	-	97	82.808	Oryctolagus_cuniculus
ENSDORG00000028216	Thumpd1	67	61.345	ENSORLG00000027557	thumpd1	76	62.185	Oryzias_latipes
ENSDORG00000028216	Thumpd1	67	62.185	ENSORLG00020010206	thumpd1	75	61.345	Oryzias_latipes_hni
ENSDORG00000028216	Thumpd1	67	62.185	ENSORLG00015009581	thumpd1	75	61.345	Oryzias_latipes_hsok
ENSDORG00000028216	Thumpd1	67	62.605	ENSOMEG00000019361	thumpd1	71	63.025	Oryzias_melastigma
ENSDORG00000028216	Thumpd1	98	82.571	ENSOGAG00000026723	THUMPD1	98	82.571	Otolemur_garnettii
ENSDORG00000028216	Thumpd1	99	81.180	ENSOARG00000013107	THUMPD1	99	80.663	Ovis_aries
ENSDORG00000028216	Thumpd1	96	62.500	ENSPPAG00000001653	-	96	68.471	Pan_paniscus
ENSDORG00000028216	Thumpd1	99	81.020	ENSPPAG00000033818	-	80	80.392	Pan_paniscus
ENSDORG00000028216	Thumpd1	100	82.645	ENSPPRG00000014118	-	100	82.645	Panthera_pardus
ENSDORG00000028216	Thumpd1	100	82.645	ENSPTIG00000013856	-	100	82.645	Panthera_tigris_altaica
ENSDORG00000028216	Thumpd1	85	67.763	ENSPTRG00000046073	-	99	61.345	Pan_troglodytes
ENSDORG00000028216	Thumpd1	99	81.020	ENSPTRG00000007848	THUMPD1	80	80.392	Pan_troglodytes
ENSDORG00000028216	Thumpd1	99	81.020	ENSPANG00000025507	THUMPD1	99	81.020	Papio_anubis
ENSDORG00000028216	Thumpd1	87	67.619	ENSPANG00000034881	-	99	67.619	Papio_anubis
ENSDORG00000028216	Thumpd1	83	57.576	ENSPKIG00000014491	thumpd1	89	57.239	Paramormyrops_kingsleyae
ENSDORG00000028216	Thumpd1	68	82.305	ENSPSIG00000012430	THUMPD1	83	82.716	Pelodiscus_sinensis
ENSDORG00000028216	Thumpd1	70	61.446	ENSPMGG00000014479	thumpd1	86	61.446	Periophthalmus_magnuspinnatus
ENSDORG00000028216	Thumpd1	66	62.025	ENSPEMG00000002608	-	100	62.447	Peromyscus_maniculatus_bairdii
ENSDORG00000028216	Thumpd1	62	52.489	ENSPMAG00000001389	thumpd1	99	52.489	Petromyzon_marinus
ENSDORG00000028216	Thumpd1	99	71.274	ENSPCIG00000029241	THUMPD1	72	71.545	Phascolarctos_cinereus
ENSDORG00000028216	Thumpd1	72	61.004	ENSPFOG00000012649	thumpd1	97	52.615	Poecilia_formosa
ENSDORG00000028216	Thumpd1	72	60.853	ENSPLAG00000000137	thumpd1	80	60.853	Poecilia_latipinna
ENSDORG00000028216	Thumpd1	72	61.240	ENSPMEG00000007750	thumpd1	97	52.778	Poecilia_mexicana
ENSDORG00000028216	Thumpd1	74	60.606	ENSPREG00000000144	thumpd1	88	60.606	Poecilia_reticulata
ENSDORG00000028216	Thumpd1	79	80.427	ENSPPYG00000007160	-	100	80.427	Pongo_abelii
ENSDORG00000028216	Thumpd1	79	74.476	ENSPCAG00000001534	THUMPD1	100	74.476	Procavia_capensis
ENSDORG00000028216	Thumpd1	99	84.136	ENSPCOG00000024663	THUMPD1	99	84.136	Propithecus_coquereli
ENSDORG00000028216	Thumpd1	100	75.616	ENSPVAG00000005659	-	100	75.616	Pteropus_vampyrus
ENSDORG00000028216	Thumpd1	61	71.556	ENSPVAG00000003286	-	99	71.556	Pteropus_vampyrus
ENSDORG00000028216	Thumpd1	73	59.459	ENSPNYG00000007061	thumpd1	78	59.690	Pundamilia_nyererei
ENSDORG00000028216	Thumpd1	75	62.172	ENSPNAG00000024872	thumpd1	86	62.172	Pygocentrus_nattereri
ENSDORG00000028216	Thumpd1	62	76.923	ENSRNOG00000014946	AABR07005588.1	100	76.923	Rattus_norvegicus
ENSDORG00000028216	Thumpd1	88	71.565	ENSRBIG00000040136	-	100	71.565	Rhinopithecus_bieti
ENSDORG00000028216	Thumpd1	100	80.501	ENSRBIG00000040752	THUMPD1	100	80.501	Rhinopithecus_bieti
ENSDORG00000028216	Thumpd1	99	80.737	ENSRROG00000042189	THUMPD1	99	80.737	Rhinopithecus_roxellana
ENSDORG00000028216	Thumpd1	88	71.246	ENSRROG00000045699	-	100	71.246	Rhinopithecus_roxellana
ENSDORG00000028216	Thumpd1	100	81.894	ENSSBOG00000034246	THUMPD1	100	81.894	Saimiri_boliviensis_boliviensis
ENSDORG00000028216	Thumpd1	99	70.219	ENSSHAG00000003853	THUMPD1	99	70.685	Sarcophilus_harrisii
ENSDORG00000028216	Thumpd1	82	50.512	ENSSFOG00015007512	thumpd1	87	50.512	Scleropages_formosus
ENSDORG00000028216	Thumpd1	72	58.301	ENSSMAG00000000723	thumpd1	77	59.690	Scophthalmus_maximus
ENSDORG00000028216	Thumpd1	73	60.618	ENSSDUG00000014502	thumpd1	79	60.618	Seriola_dumerili
ENSDORG00000028216	Thumpd1	73	61.004	ENSSLDG00000007694	thumpd1	79	61.004	Seriola_lalandi_dorsalis
ENSDORG00000028216	Thumpd1	77	74.733	ENSSPUG00000005096	THUMPD1	83	75.089	Sphenodon_punctatus
ENSDORG00000028216	Thumpd1	72	60.853	ENSSPAG00000006993	thumpd1	80	60.853	Stegastes_partitus
ENSDORG00000028216	Thumpd1	100	80.992	ENSSSCG00000024748	THUMPD1	100	80.992	Sus_scrofa
ENSDORG00000028216	Thumpd1	69	79.268	ENSTGUG00000009247	THUMPD1	89	79.675	Taeniopygia_guttata
ENSDORG00000028216	Thumpd1	73	59.924	ENSTRUG00000015656	thumpd1	80	59.924	Takifugu_rubripes
ENSDORG00000028216	Thumpd1	73	59.160	ENSTNIG00000001584	thumpd1	85	59.160	Tetraodon_nigroviridis
ENSDORG00000028216	Thumpd1	100	81.894	ENSTBEG00000005252	THUMPD1	88	81.894	Tupaia_belangeri
ENSDORG00000028216	Thumpd1	99	82.073	ENSTTRG00000016435	THUMPD1	99	82.073	Tursiops_truncatus
ENSDORG00000028216	Thumpd1	62	70.222	ENSUAMG00000005779	-	100	70.222	Ursus_americanus
ENSDORG00000028216	Thumpd1	99	78.992	ENSVPAG00000003422	THUMPD1	99	78.992	Vicugna_pacos
ENSDORG00000028216	Thumpd1	100	82.369	ENSVVUG00000023241	THUMPD1	99	82.369	Vulpes_vulpes
ENSDORG00000028216	Thumpd1	74	60.837	ENSXETG00000005539	thumpd1	88	61.597	Xenopus_tropicalis
ENSDORG00000028216	Thumpd1	72	60.853	ENSXMAG00000026052	thumpd1	80	60.853	Xiphophorus_maculatus