EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000028344 (Gene tree)
Gene ID: 105987849
Gene Symbol: Rab23
Alias: -
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 29074 bases
Position: chrKN672390.1:1051042-1080115
Accession: 105987849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000021370	MMR_HSR1	PF01926.23	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000023832	-	1634	XM_013019273	ENSDORP00000021370	236 (aa)	XP_012874727	A0A1S3FFK8

Gene Model

Click here to download ENSDORG00000028344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000028344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000028344	Rab23	70	33.735	ENSDORG00000023851	Rab14	77	33.735
ENSDORG00000028344	Rab23	68	35.329	ENSDORG00000009342	Rab9	83	35.329
ENSDORG00000028344	Rab23	67	31.481	ENSDORG00000028079	Hras	90	34.682
ENSDORG00000028344	Rab23	73	33.526	ENSDORG00000028628	-	84	33.526
ENSDORG00000028344	Rab23	73	30.939	ENSDORG00000030008	Rasl11b	82	30.939
ENSDORG00000028344	Rab23	72	34.659	ENSDORG00000027671	-	85	34.659
ENSDORG00000028344	Rab23	72	34.884	ENSDORG00000025986	Rab15	78	35.928
ENSDORG00000028344	Rab23	72	34.483	ENSDORG00000011469	-	91	34.483
ENSDORG00000028344	Rab23	75	32.778	ENSDORG00000029360	-	85	32.778
ENSDORG00000028344	Rab23	69	34.524	ENSDORG00000008920	Rab12	73	34.524
ENSDORG00000028344	Rab23	77	38.378	ENSDORG00000005225	Rab36	55	38.378
ENSDORG00000028344	Rab23	74	38.068	ENSDORG00000010504	-	87	38.068
ENSDORG00000028344	Rab23	74	38.068	ENSDORG00000015066	-	87	38.068
ENSDORG00000028344	Rab23	73	32.759	ENSDORG00000002922	Rab25	82	32.759
ENSDORG00000028344	Rab23	69	38.788	ENSDORG00000001591	Rab13	81	38.788
ENSDORG00000028344	Rab23	74	33.702	ENSDORG00000023607	Rab42	84	33.702
ENSDORG00000028344	Rab23	88	32.243	ENSDORG00000028596	-	100	32.243
ENSDORG00000028344	Rab23	86	33.981	ENSDORG00000012048	Rab2b	94	33.981
ENSDORG00000028344	Rab23	83	32.323	ENSDORG00000025014	Rab2a	96	31.553
ENSDORG00000028344	Rab23	67	41.139	ENSDORG00000026441	Rab6b	76	41.139
ENSDORG00000028344	Rab23	67	33.129	ENSDORG00000024129	Rab33a	69	33.129
ENSDORG00000028344	Rab23	64	39.744	ENSDORG00000011452	Rab34	60	39.744
ENSDORG00000028344	Rab23	73	33.526	ENSDORG00000002511	Rab1b	86	33.526
ENSDORG00000028344	Rab23	67	36.875	ENSDORG00000006819	Rab5c	74	36.875
ENSDORG00000028344	Rab23	80	35.079	ENSDORG00000006304	Rab11b	88	35.079
ENSDORG00000028344	Rab23	73	36.416	ENSDORG00000000972	Rab35	86	36.416
ENSDORG00000028344	Rab23	67	39.873	ENSDORG00000027784	Rab6a	76	39.873
ENSDORG00000028344	Rab23	71	33.918	ENSDORG00000025032	Mras	80	33.918
ENSDORG00000028344	Rab23	72	33.889	ENSDORG00000023618	Rab33b	79	33.889
ENSDORG00000028344	Rab23	71	36.686	ENSDORG00000024958	-	79	36.686
ENSDORG00000028344	Rab23	67	37.500	ENSDORG00000025063	Rab5b	74	37.500
ENSDORG00000028344	Rab23	70	36.095	ENSDORG00000029496	Rab39b	79	36.095
ENSDORG00000028344	Rab23	64	31.579	ENSDORG00000025267	Nras	85	34.969

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000028344	Rab23	99	94.915	ENSG00000112210	RAB23	99	94.915	Homo_sapiens
ENSDORG00000028344	Rab23	100	81.435	ENSAPOG00000008892	rab23	100	81.435	Acanthochromis_polyacanthus
ENSDORG00000028344	Rab23	99	94.915	ENSAMEG00000006825	RAB23	99	94.915	Ailuropoda_melanoleuca
ENSDORG00000028344	Rab23	100	72.881	ENSACIG00000020496	rab23	100	72.881	Amphilophus_citrinellus
ENSDORG00000028344	Rab23	100	81.857	ENSAOCG00000004234	rab23	100	81.857	Amphiprion_ocellaris
ENSDORG00000028344	Rab23	100	81.857	ENSAPEG00000019758	rab23	100	81.857	Amphiprion_percula
ENSDORG00000028344	Rab23	100	81.013	ENSATEG00000020913	rab23	100	81.013	Anabas_testudineus
ENSDORG00000028344	Rab23	74	92.000	ENSAPLG00000003715	RAB23	99	92.000	Anas_platyrhynchos
ENSDORG00000028344	Rab23	99	87.764	ENSACAG00000006656	RAB23	99	87.764	Anolis_carolinensis
ENSDORG00000028344	Rab23	99	94.492	ENSANAG00000027052	-	99	94.492	Aotus_nancymaae
ENSDORG00000028344	Rab23	100	81.857	ENSACLG00000002819	rab23	100	81.857	Astatotilapia_calliptera
ENSDORG00000028344	Rab23	100	83.966	ENSAMXG00000014960	rab23	100	83.966	Astyanax_mexicanus
ENSDORG00000028344	Rab23	99	92.373	ENSBTAG00000005362	RAB23	99	92.373	Bos_taurus
ENSDORG00000028344	Rab23	99	94.492	ENSCJAG00000010247	RAB23	99	94.492	Callithrix_jacchus
ENSDORG00000028344	Rab23	99	94.492	ENSCAFG00000002459	RAB23	99	94.492	Canis_familiaris
ENSDORG00000028344	Rab23	99	94.492	ENSCAFG00020015900	RAB23	99	94.492	Canis_lupus_dingo
ENSDORG00000028344	Rab23	99	92.373	ENSCHIG00000009815	RAB23	99	92.373	Capra_hircus
ENSDORG00000028344	Rab23	100	94.093	ENSTSYG00000029126	RAB23	100	94.093	Carlito_syrichta
ENSDORG00000028344	Rab23	99	91.525	ENSCPOG00000030218	RAB23	99	91.525	Cavia_porcellus
ENSDORG00000028344	Rab23	99	94.492	ENSCCAG00000020364	RAB23	99	94.492	Cebus_capucinus
ENSDORG00000028344	Rab23	99	95.763	ENSCATG00000027876	RAB23	99	95.763	Cercocebus_atys
ENSDORG00000028344	Rab23	99	93.220	ENSCLAG00000000797	RAB23	99	93.220	Chinchilla_lanigera
ENSDORG00000028344	Rab23	99	94.915	ENSCSAG00000013438	RAB23	99	94.915	Chlorocebus_sabaeus
ENSDORG00000028344	Rab23	99	88.136	ENSCPBG00000022640	RAB23	99	88.136	Chrysemys_picta_bellii
ENSDORG00000028344	Rab23	100	64.754	ENSCING00000001155	-	100	64.754	Ciona_intestinalis
ENSDORG00000028344	Rab23	100	62.241	ENSCSAVG00000001356	-	100	63.636	Ciona_savignyi
ENSDORG00000028344	Rab23	99	94.915	ENSCANG00000031065	RAB23	99	94.915	Colobus_angolensis_palliatus
ENSDORG00000028344	Rab23	99	91.949	ENSCGRG00001008994	Rab23	99	91.949	Cricetulus_griseus_chok1gshd
ENSDORG00000028344	Rab23	99	91.064	ENSCGRG00000013630	Rab23	99	91.064	Cricetulus_griseus_crigri
ENSDORG00000028344	Rab23	100	72.458	ENSCSEG00000010565	rab23	100	72.458	Cynoglossus_semilaevis
ENSDORG00000028344	Rab23	100	81.435	ENSCVAG00000020501	rab23	100	81.435	Cyprinodon_variegatus
ENSDORG00000028344	Rab23	100	83.966	ENSDARG00000004151	rab23	100	83.966	Danio_rerio
ENSDORG00000028344	Rab23	99	90.678	ENSDNOG00000015501	RAB23	99	90.678	Dasypus_novemcinctus
ENSDORG00000028344	Rab23	94	58.824	FBgn0037364	Rab23	82	58.824	Drosophila_melanogaster
ENSDORG00000028344	Rab23	97	66.379	ENSEBUG00000010861	-	92	66.379	Eptatretus_burgeri
ENSDORG00000028344	Rab23	99	93.644	ENSEASG00005003529	RAB23	99	93.644	Equus_asinus_asinus
ENSDORG00000028344	Rab23	99	93.644	ENSECAG00000013427	RAB23	99	93.644	Equus_caballus
ENSDORG00000028344	Rab23	100	92.827	ENSEEUG00000015045	RAB23	100	92.827	Erinaceus_europaeus
ENSDORG00000028344	Rab23	100	81.435	ENSELUG00000020788	rab23	100	82.278	Esox_lucius
ENSDORG00000028344	Rab23	99	94.915	ENSFCAG00000044358	RAB23	99	94.915	Felis_catus
ENSDORG00000028344	Rab23	99	86.864	ENSFALG00000001708	RAB23	99	86.864	Ficedula_albicollis
ENSDORG00000028344	Rab23	99	91.102	ENSFDAG00000014834	RAB23	99	91.102	Fukomys_damarensis
ENSDORG00000028344	Rab23	100	80.591	ENSFHEG00000023069	rab23	100	80.591	Fundulus_heteroclitus
ENSDORG00000028344	Rab23	100	83.544	ENSGMOG00000005102	rab23	100	83.544	Gadus_morhua
ENSDORG00000028344	Rab23	99	86.017	ENSGALG00000016279	RAB23	99	86.017	Gallus_gallus
ENSDORG00000028344	Rab23	100	79.747	ENSGAFG00000007684	rab23	100	79.747	Gambusia_affinis
ENSDORG00000028344	Rab23	100	83.122	ENSGACG00000006151	rab23	100	83.122	Gasterosteus_aculeatus
ENSDORG00000028344	Rab23	99	88.559	ENSGAGG00000012709	RAB23	99	88.559	Gopherus_agassizii
ENSDORG00000028344	Rab23	100	73.305	ENSHBUG00000007966	rab23	100	73.305	Haplochromis_burtoni
ENSDORG00000028344	Rab23	99	73.750	ENSHGLG00000009371	-	99	77.083	Heterocephalus_glaber_female
ENSDORG00000028344	Rab23	99	92.373	ENSHGLG00000013030	-	99	92.373	Heterocephalus_glaber_female
ENSDORG00000028344	Rab23	99	92.373	ENSHGLG00100005945	-	99	92.373	Heterocephalus_glaber_male
ENSDORG00000028344	Rab23	99	73.750	ENSHGLG00100017177	-	99	77.083	Heterocephalus_glaber_male
ENSDORG00000028344	Rab23	100	70.763	ENSHCOG00000013919	rab23	100	70.763	Hippocampus_comes
ENSDORG00000028344	Rab23	100	74.576	ENSIPUG00000016494	rab23	100	74.576	Ictalurus_punctatus
ENSDORG00000028344	Rab23	99	94.915	ENSSTOG00000010962	RAB23	99	94.915	Ictidomys_tridecemlineatus
ENSDORG00000028344	Rab23	99	93.220	ENSJJAG00000020094	Rab23	99	93.220	Jaculus_jaculus
ENSDORG00000028344	Rab23	100	81.013	ENSKMAG00000018270	rab23	100	81.013	Kryptolebias_marmoratus
ENSDORG00000028344	Rab23	100	80.169	ENSLBEG00000013176	rab23	100	80.169	Labrus_bergylta
ENSDORG00000028344	Rab23	100	86.498	ENSLACG00000004025	RAB23	100	86.498	Latimeria_chalumnae
ENSDORG00000028344	Rab23	100	84.583	ENSLOCG00000016999	rab23	100	84.583	Lepisosteus_oculatus
ENSDORG00000028344	Rab23	99	94.492	ENSLAFG00000007209	RAB23	99	94.492	Loxodonta_africana
ENSDORG00000028344	Rab23	99	95.763	ENSMFAG00000032369	RAB23	99	95.763	Macaca_fascicularis
ENSDORG00000028344	Rab23	99	95.763	ENSMMUG00000018003	RAB23	99	95.763	Macaca_mulatta
ENSDORG00000028344	Rab23	99	95.763	ENSMNEG00000037012	RAB23	99	95.763	Macaca_nemestrina
ENSDORG00000028344	Rab23	99	95.763	ENSMLEG00000042429	RAB23	99	95.763	Mandrillus_leucophaeus
ENSDORG00000028344	Rab23	100	81.857	ENSMAMG00000015456	rab23	100	82.278	Mastacembelus_armatus
ENSDORG00000028344	Rab23	100	81.857	ENSMZEG00005005441	rab23	100	81.857	Maylandia_zebra
ENSDORG00000028344	Rab23	99	86.864	ENSMGAG00000013882	RAB23	99	86.864	Meleagris_gallopavo
ENSDORG00000028344	Rab23	99	94.915	ENSMICG00000014037	RAB23	99	94.915	Microcebus_murinus
ENSDORG00000028344	Rab23	99	93.644	ENSMOCG00000000444	Rab23	99	93.644	Microtus_ochrogaster
ENSDORG00000028344	Rab23	100	72.881	ENSMMOG00000007703	rab23	100	72.881	Mola_mola
ENSDORG00000028344	Rab23	99	92.373	ENSMODG00000018720	RAB23	99	92.373	Monodelphis_domestica
ENSDORG00000028344	Rab23	100	82.278	ENSMALG00000002136	rab23	100	82.278	Monopterus_albus
ENSDORG00000028344	Rab23	99	92.373	MGP_CAROLIEiJ_G0014015	Rab23	99	92.373	Mus_caroli
ENSDORG00000028344	Rab23	99	91.102	ENSMUSG00000004768	Rab23	99	91.102	Mus_musculus
ENSDORG00000028344	Rab23	99	91.949	MGP_PahariEiJ_G0027261	Rab23	99	91.949	Mus_pahari
ENSDORG00000028344	Rab23	99	91.525	MGP_SPRETEiJ_G0014820	Rab23	99	91.525	Mus_spretus
ENSDORG00000028344	Rab23	99	83.544	ENSMPUG00000002642	RAB23	99	83.544	Mustela_putorius_furo
ENSDORG00000028344	Rab23	99	94.068	ENSMLUG00000004058	RAB23	99	94.068	Myotis_lucifugus
ENSDORG00000028344	Rab23	99	93.220	ENSNGAG00000018038	Rab23	99	93.220	Nannospalax_galili
ENSDORG00000028344	Rab23	100	81.857	ENSNBRG00000013691	rab23	100	81.857	Neolamprologus_brichardi
ENSDORG00000028344	Rab23	99	95.339	ENSNLEG00000027830	RAB23	99	95.339	Nomascus_leucogenys
ENSDORG00000028344	Rab23	99	91.102	ENSODEG00000016056	RAB23	99	91.102	Octodon_degus
ENSDORG00000028344	Rab23	100	81.092	ENSONIG00000009749	rab23	100	81.092	Oreochromis_niloticus
ENSDORG00000028344	Rab23	99	91.102	ENSOANG00000001398	RAB23	99	91.102	Ornithorhynchus_anatinus
ENSDORG00000028344	Rab23	99	94.492	ENSOCUG00000004816	RAB23	99	94.492	Oryctolagus_cuniculus
ENSDORG00000028344	Rab23	100	80.169	ENSORLG00000010115	rab23	100	80.169	Oryzias_latipes
ENSDORG00000028344	Rab23	100	80.169	ENSORLG00020020220	rab23	100	80.169	Oryzias_latipes_hni
ENSDORG00000028344	Rab23	100	79.325	ENSORLG00015004033	rab23	100	79.325	Oryzias_latipes_hsok
ENSDORG00000028344	Rab23	100	79.747	ENSOMEG00000001706	rab23	100	79.747	Oryzias_melastigma
ENSDORG00000028344	Rab23	99	95.339	ENSOGAG00000005675	RAB23	99	95.339	Otolemur_garnettii
ENSDORG00000028344	Rab23	99	92.373	ENSOARG00000005749	RAB23	99	92.373	Ovis_aries
ENSDORG00000028344	Rab23	99	94.915	ENSPPAG00000010023	RAB23	99	94.915	Pan_paniscus
ENSDORG00000028344	Rab23	99	94.492	ENSPPRG00000012453	RAB23	99	94.492	Panthera_pardus
ENSDORG00000028344	Rab23	99	94.915	ENSPTIG00000009435	RAB23	99	94.915	Panthera_tigris_altaica
ENSDORG00000028344	Rab23	99	95.339	ENSPTRG00000043341	RAB23	99	95.339	Pan_troglodytes
ENSDORG00000028344	Rab23	99	95.763	ENSPANG00000017772	RAB23	99	95.763	Papio_anubis
ENSDORG00000028344	Rab23	74	92.571	ENSPKIG00000024310	rab23	86	92.571	Paramormyrops_kingsleyae
ENSDORG00000028344	Rab23	99	88.136	ENSPSIG00000015579	RAB23	99	88.136	Pelodiscus_sinensis
ENSDORG00000028344	Rab23	100	70.339	ENSPMGG00000008577	rab23	100	70.339	Periophthalmus_magnuspinnatus
ENSDORG00000028344	Rab23	99	92.797	ENSPEMG00000023271	Rab23	99	92.797	Peromyscus_maniculatus_bairdii
ENSDORG00000028344	Rab23	100	68.619	ENSPMAG00000006835	-	100	68.619	Petromyzon_marinus
ENSDORG00000028344	Rab23	99	92.797	ENSPCIG00000007267	RAB23	99	92.797	Phascolarctos_cinereus
ENSDORG00000028344	Rab23	100	80.169	ENSPFOG00000011493	rab23	100	80.169	Poecilia_formosa
ENSDORG00000028344	Rab23	100	79.747	ENSPLAG00000011697	rab23	100	79.747	Poecilia_latipinna
ENSDORG00000028344	Rab23	100	80.169	ENSPMEG00000017300	rab23	100	80.169	Poecilia_mexicana
ENSDORG00000028344	Rab23	100	71.186	ENSPREG00000022509	rab23	100	71.186	Poecilia_reticulata
ENSDORG00000028344	Rab23	99	95.339	ENSPPYG00000016739	RAB23	99	95.339	Pongo_abelii
ENSDORG00000028344	Rab23	99	94.492	ENSPCOG00000028471	RAB23	99	94.492	Propithecus_coquereli
ENSDORG00000028344	Rab23	99	83.898	ENSPVAG00000017693	RAB23	99	83.898	Pteropus_vampyrus
ENSDORG00000028344	Rab23	100	81.857	ENSPNYG00000019639	rab23	100	81.857	Pundamilia_nyererei
ENSDORG00000028344	Rab23	100	84.810	ENSPNAG00000024728	rab23	100	84.810	Pygocentrus_nattereri
ENSDORG00000028344	Rab23	99	91.525	ENSRNOG00000012629	Rab23	99	91.525	Rattus_norvegicus
ENSDORG00000028344	Rab23	99	90.456	ENSRBIG00000030547	RAB23	99	90.456	Rhinopithecus_bieti
ENSDORG00000028344	Rab23	99	95.339	ENSRROG00000035920	RAB23	99	95.339	Rhinopithecus_roxellana
ENSDORG00000028344	Rab23	99	94.915	ENSSBOG00000033237	RAB23	99	94.915	Saimiri_boliviensis_boliviensis
ENSDORG00000028344	Rab23	99	92.373	ENSSHAG00000006379	RAB23	99	92.373	Sarcophilus_harrisii
ENSDORG00000028344	Rab23	100	83.966	ENSSFOG00015012604	rab23	100	83.966	Scleropages_formosus
ENSDORG00000028344	Rab23	100	80.591	ENSSMAG00000006341	rab23	100	80.591	Scophthalmus_maximus
ENSDORG00000028344	Rab23	100	81.435	ENSSDUG00000023508	rab23	100	81.435	Seriola_dumerili
ENSDORG00000028344	Rab23	100	81.435	ENSSLDG00000000287	rab23	100	81.435	Seriola_lalandi_dorsalis
ENSDORG00000028344	Rab23	99	92.797	ENSSARG00000013689	RAB23	99	92.797	Sorex_araneus
ENSDORG00000028344	Rab23	99	89.831	ENSSPUG00000006274	RAB23	99	89.831	Sphenodon_punctatus
ENSDORG00000028344	Rab23	100	81.857	ENSSPAG00000010373	rab23	100	81.857	Stegastes_partitus
ENSDORG00000028344	Rab23	99	91.525	ENSSSCG00000029539	RAB23	99	91.525	Sus_scrofa
ENSDORG00000028344	Rab23	99	86.864	ENSTGUG00000012794	RAB23	99	86.864	Taeniopygia_guttata
ENSDORG00000028344	Rab23	100	79.661	ENSTRUG00000015697	rab23	100	79.661	Takifugu_rubripes
ENSDORG00000028344	Rab23	100	81.780	ENSTNIG00000016575	rab23	100	81.780	Tetraodon_nigroviridis
ENSDORG00000028344	Rab23	99	94.492	ENSUAMG00000013367	RAB23	99	94.492	Ursus_americanus
ENSDORG00000028344	Rab23	99	94.492	ENSUMAG00000018629	RAB23	99	94.492	Ursus_maritimus
ENSDORG00000028344	Rab23	81	65.445	ENSVPAG00000006805	RAB23	100	65.445	Vicugna_pacos
ENSDORG00000028344	Rab23	99	94.068	ENSVVUG00000008535	RAB23	99	94.068	Vulpes_vulpes
ENSDORG00000028344	Rab23	100	79.412	ENSXETG00000004449	rab23	100	79.412	Xenopus_tropicalis
ENSDORG00000028344	Rab23	100	79.325	ENSXCOG00000011864	rab23	100	79.325	Xiphophorus_couchianus
ENSDORG00000028344	Rab23	100	79.747	ENSXMAG00000009387	rab23	100	79.747	Xiphophorus_maculatus