EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000028378 (Gene tree)
Gene ID: 105981641
Gene Symbol: Srsf6
Alias: -
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 5750 bases
Position: chrKN672359.1:22258800-22264549
Accession: 105981641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000024386	RRM_1	PF00076.22	8.4e-33	1	2
ENSDORP00000024386	RRM_1	PF00076.22	8.4e-33	2	2
ENSDORP00000023212	RRM_1	PF00076.22	2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000033868	-	3609	XM_013010858	ENSDORP00000024386	344 (aa)	XP_012866312	A0A1S3ES98
ENSDORT00000029963	-	408	-	ENSDORP00000023212	135 (aa)	-	UPI000002B37D

Gene Model

Click here to download ENSDORG00000028378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000028378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000028378	Srsf6	53	37.975	ENSDORG00000015481	-	77	37.975
ENSDORG00000028378	Srsf6	58	40.670	ENSDORG00000015082	Srsf1	78	41.627
ENSDORG00000028378	Srsf6	51	47.297	ENSDORG00000013162	Srsf9	71	40.571
ENSDORG00000028378	Srsf6	50	71.642	ENSDORG00000003989	Srsf5	66	64.286
ENSDORG00000028378	Srsf6	56	34.667	ENSDORG00000004538	-	52	34.667
ENSDORG00000028378	Srsf6	50	30.263	ENSDORG00000000182	Rbm3	57	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000028378	Srsf6	100	100.000	ENSG00000124193	SRSF6	100	100.000	Homo_sapiens
ENSDORG00000028378	Srsf6	58	93.590	ENSAPOG00000016635	-	84	81.618	Acanthochromis_polyacanthus
ENSDORG00000028378	Srsf6	94	85.846	ENSAMEG00000003710	SRSF6	94	85.583	Ailuropoda_melanoleuca
ENSDORG00000028378	Srsf6	87	68.121	ENSACIG00000023658	-	56	87.778	Amphilophus_citrinellus
ENSDORG00000028378	Srsf6	63	87.059	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSDORG00000028378	Srsf6	65	82.955	ENSAOCG00000004309	-	57	83.152	Amphiprion_ocellaris
ENSDORG00000028378	Srsf6	92	67.939	ENSAOCG00000019438	-	98	67.939	Amphiprion_ocellaris
ENSDORG00000028378	Srsf6	63	84.706	ENSAPEG00000020746	-	66	79.787	Amphiprion_percula
ENSDORG00000028378	Srsf6	98	61.871	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSDORG00000028378	Srsf6	66	83.146	ENSATEG00000007255	-	71	80.000	Anabas_testudineus
ENSDORG00000028378	Srsf6	94	81.595	ENSACAG00000002061	SRSF6	93	85.321	Anolis_carolinensis
ENSDORG00000028378	Srsf6	100	100.000	ENSANAG00000024080	SRSF6	100	100.000	Aotus_nancymaae
ENSDORG00000028378	Srsf6	54	89.041	ENSACLG00000024373	-	96	79.570	Astatotilapia_calliptera
ENSDORG00000028378	Srsf6	55	91.892	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSDORG00000028378	Srsf6	55	93.243	ENSAMXG00000003101	-	51	85.789	Astyanax_mexicanus
ENSDORG00000028378	Srsf6	100	99.259	ENSBTAG00000008527	SRSF6	100	99.259	Bos_taurus
ENSDORG00000028378	Srsf6	100	100.000	ENSCJAG00000048403	SRSF6	100	100.000	Callithrix_jacchus
ENSDORG00000028378	Srsf6	100	99.259	ENSCAFG00000009289	SRSF6	100	99.259	Canis_familiaris
ENSDORG00000028378	Srsf6	100	99.259	ENSCAFG00020013559	SRSF6	100	99.259	Canis_lupus_dingo
ENSDORG00000028378	Srsf6	100	96.522	ENSCHIG00000009148	-	100	96.522	Capra_hircus
ENSDORG00000028378	Srsf6	100	99.259	ENSCHIG00000015890	-	100	99.259	Capra_hircus
ENSDORG00000028378	Srsf6	94	82.298	ENSTSYG00000026476	SRSF6	93	79.385	Carlito_syrichta
ENSDORG00000028378	Srsf6	100	100.000	ENSCPOG00000011761	SRSF6	100	100.000	Cavia_porcellus
ENSDORG00000028378	Srsf6	94	71.166	ENSCCAG00000018540	-	62	87.766	Cebus_capucinus
ENSDORG00000028378	Srsf6	100	100.000	ENSCCAG00000026018	-	100	100.000	Cebus_capucinus
ENSDORG00000028378	Srsf6	100	100.000	ENSCATG00000030794	SRSF6	100	100.000	Cercocebus_atys
ENSDORG00000028378	Srsf6	100	100.000	ENSCLAG00000010247	SRSF6	100	100.000	Chinchilla_lanigera
ENSDORG00000028378	Srsf6	100	97.681	ENSCSAG00000014022	SRSF6	100	97.681	Chlorocebus_sabaeus
ENSDORG00000028378	Srsf6	100	83.188	ENSCHOG00000000561	SRSF6	100	83.188	Choloepus_hoffmanni
ENSDORG00000028378	Srsf6	58	97.436	ENSCPBG00000018200	SRSF6	94	85.455	Chrysemys_picta_bellii
ENSDORG00000028378	Srsf6	100	97.391	ENSCANG00000037774	-	100	97.391	Colobus_angolensis_palliatus
ENSDORG00000028378	Srsf6	100	83.188	ENSCANG00000042529	-	100	83.188	Colobus_angolensis_palliatus
ENSDORG00000028378	Srsf6	100	98.519	ENSCGRG00001022339	Srsf6	100	98.519	Cricetulus_griseus_chok1gshd
ENSDORG00000028378	Srsf6	63	96.279	ENSCGRG00000006618	Srsf6	100	96.279	Cricetulus_griseus_crigri
ENSDORG00000028378	Srsf6	58	93.590	ENSCSEG00000019778	SRSF6	90	84.252	Cynoglossus_semilaevis
ENSDORG00000028378	Srsf6	58	92.308	ENSCVAG00000001863	SRSF6	95	85.039	Cyprinodon_variegatus
ENSDORG00000028378	Srsf6	55	90.541	ENSDARG00000016783	srsf6b	87	89.157	Danio_rerio
ENSDORG00000028378	Srsf6	94	96.296	ENSDNOG00000008410	SRSF6	94	96.296	Dasypus_novemcinctus
ENSDORG00000028378	Srsf6	93	92.812	ENSETEG00000006221	SRSF6	94	90.154	Echinops_telfairi
ENSDORG00000028378	Srsf6	94	95.988	ENSEASG00005023429	SRSF6	94	96.615	Equus_asinus_asinus
ENSDORG00000028378	Srsf6	94	95.988	ENSECAG00000023932	SRSF6	94	96.615	Equus_caballus
ENSDORG00000028378	Srsf6	57	93.846	ENSEEUG00000002324	SRSF6	90	93.434	Erinaceus_europaeus
ENSDORG00000028378	Srsf6	98	59.286	ENSELUG00000024182	SRSF6	85	87.356	Esox_lucius
ENSDORG00000028378	Srsf6	73	77.778	ENSELUG00000013506	SRSF6	88	77.778	Esox_lucius
ENSDORG00000028378	Srsf6	100	96.812	ENSFCAG00000032814	SRSF6	100	96.812	Felis_catus
ENSDORG00000028378	Srsf6	100	83.140	ENSFDAG00000012191	SRSF6	100	83.140	Fukomys_damarensis
ENSDORG00000028378	Srsf6	88	70.724	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSDORG00000028378	Srsf6	56	90.789	ENSGMOG00000014458	srsf6a	52	78.646	Gadus_morhua
ENSDORG00000028378	Srsf6	61	76.829	ENSGMOG00000006105	srsf6a	62	70.391	Gadus_morhua
ENSDORG00000028378	Srsf6	100	97.037	ENSGALG00000000990	SRSF6	100	97.037	Gallus_gallus
ENSDORG00000028378	Srsf6	58	92.308	ENSGAFG00000019088	-	72	82.400	Gambusia_affinis
ENSDORG00000028378	Srsf6	98	61.194	ENSGACG00000006084	srsf6a	53	83.871	Gasterosteus_aculeatus
ENSDORG00000028378	Srsf6	58	97.436	ENSGAGG00000003238	SRSF6	94	85.455	Gopherus_agassizii
ENSDORG00000028378	Srsf6	100	100.000	ENSGGOG00000009808	SRSF6	100	100.000	Gorilla_gorilla
ENSDORG00000028378	Srsf6	80	65.818	ENSHBUG00000006386	-	58	83.696	Haplochromis_burtoni
ENSDORG00000028378	Srsf6	100	100.000	ENSHGLG00000007348	SRSF6	100	100.000	Heterocephalus_glaber_female
ENSDORG00000028378	Srsf6	88	78.878	ENSHGLG00000007701	-	58	79.144	Heterocephalus_glaber_female
ENSDORG00000028378	Srsf6	100	83.430	ENSHGLG00100005043	SRSF6	100	83.430	Heterocephalus_glaber_male
ENSDORG00000028378	Srsf6	58	89.744	ENSHCOG00000002740	srsf6a	57	83.152	Hippocampus_comes
ENSDORG00000028378	Srsf6	58	92.308	ENSIPUG00000004776	-	72	76.233	Ictalurus_punctatus
ENSDORG00000028378	Srsf6	100	100.000	ENSSTOG00000010866	SRSF6	100	100.000	Ictidomys_tridecemlineatus
ENSDORG00000028378	Srsf6	63	93.953	ENSJJAG00000020690	Srsf6	100	93.953	Jaculus_jaculus
ENSDORG00000028378	Srsf6	54	93.151	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSDORG00000028378	Srsf6	58	92.308	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSDORG00000028378	Srsf6	89	82.692	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSDORG00000028378	Srsf6	69	95.816	ENSLAFG00000006682	SRSF6	89	95.652	Loxodonta_africana
ENSDORG00000028378	Srsf6	100	100.000	ENSMFAG00000036925	SRSF6	100	100.000	Macaca_fascicularis
ENSDORG00000028378	Srsf6	100	100.000	ENSMMUG00000006742	SRSF6	100	100.000	Macaca_mulatta
ENSDORG00000028378	Srsf6	100	98.519	ENSMNEG00000027392	-	100	98.519	Macaca_nemestrina
ENSDORG00000028378	Srsf6	94	97.205	ENSMNEG00000038270	-	94	96.923	Macaca_nemestrina
ENSDORG00000028378	Srsf6	63	96.296	ENSMLEG00000031524	SRSF6	100	96.296	Mandrillus_leucophaeus
ENSDORG00000028378	Srsf6	98	61.871	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSDORG00000028378	Srsf6	63	87.059	ENSMAMG00000023477	-	89	87.059	Mastacembelus_armatus
ENSDORG00000028378	Srsf6	56	89.474	ENSMZEG00005008032	-	57	83.696	Maylandia_zebra
ENSDORG00000028378	Srsf6	98	58.333	ENSMZEG00005020658	-	60	82.873	Maylandia_zebra
ENSDORG00000028378	Srsf6	100	98.519	ENSMAUG00000019086	-	100	98.519	Mesocricetus_auratus
ENSDORG00000028378	Srsf6	100	100.000	ENSMICG00000008537	SRSF6	100	100.000	Microcebus_murinus
ENSDORG00000028378	Srsf6	63	96.279	ENSMOCG00000018738	Srsf6	100	96.279	Microtus_ochrogaster
ENSDORG00000028378	Srsf6	58	92.308	ENSMMOG00000015241	-	78	90.361	Mola_mola
ENSDORG00000028378	Srsf6	58	97.436	ENSMODG00000003107	SRSF6	95	89.024	Monodelphis_domestica
ENSDORG00000028378	Srsf6	100	98.519	MGP_CAROLIEiJ_G0024606	Srsf6	100	98.519	Mus_caroli
ENSDORG00000028378	Srsf6	100	98.519	ENSMUSG00000016921	Srsf6	100	98.519	Mus_musculus
ENSDORG00000028378	Srsf6	100	98.519	MGP_PahariEiJ_G0026050	Srsf6	100	98.519	Mus_pahari
ENSDORG00000028378	Srsf6	100	98.519	MGP_SPRETEiJ_G0025528	Srsf6	100	98.519	Mus_spretus
ENSDORG00000028378	Srsf6	84	98.264	ENSMPUG00000017692	SRSF6	99	98.264	Mustela_putorius_furo
ENSDORG00000028378	Srsf6	94	81.056	ENSMLUG00000016618	SRSF6	94	80.923	Myotis_lucifugus
ENSDORG00000028378	Srsf6	100	100.000	ENSNGAG00000017560	Srsf6	100	100.000	Nannospalax_galili
ENSDORG00000028378	Srsf6	58	93.590	ENSNBRG00000001846	-	52	87.634	Neolamprologus_brichardi
ENSDORG00000028378	Srsf6	56	89.474	ENSNBRG00000014709	-	58	83.696	Neolamprologus_brichardi
ENSDORG00000028378	Srsf6	100	100.000	ENSNLEG00000006524	SRSF6	100	100.000	Nomascus_leucogenys
ENSDORG00000028378	Srsf6	58	97.436	ENSMEUG00000014615	SRSF6	62	96.809	Notamacropus_eugenii
ENSDORG00000028378	Srsf6	75	98.450	ENSOPRG00000002017	-	100	98.450	Ochotona_princeps
ENSDORG00000028378	Srsf6	100	100.000	ENSODEG00000016510	-	100	100.000	Octodon_degus
ENSDORG00000028378	Srsf6	61	86.585	ENSONIG00000020247	-	53	84.239	Oreochromis_niloticus
ENSDORG00000028378	Srsf6	74	58.268	ENSOCUG00000023999	-	70	63.687	Oryctolagus_cuniculus
ENSDORG00000028378	Srsf6	84	81.046	ENSOCUG00000009785	-	98	84.459	Oryctolagus_cuniculus
ENSDORG00000028378	Srsf6	58	94.872	ENSORLG00020017506	srsf6a	90	70.323	Oryzias_latipes_hni
ENSDORG00000028378	Srsf6	95	96.626	ENSOGAG00000014468	SRSF6	94	96.923	Otolemur_garnettii
ENSDORG00000028378	Srsf6	94	93.789	ENSOARG00000003117	SRSF6	94	93.538	Ovis_aries
ENSDORG00000028378	Srsf6	100	97.977	ENSPPAG00000034327	-	100	97.977	Pan_paniscus
ENSDORG00000028378	Srsf6	90	84.887	ENSPPAG00000043131	-	100	87.138	Pan_paniscus
ENSDORG00000028378	Srsf6	100	96.812	ENSPPRG00000008917	SRSF6	100	96.812	Panthera_pardus
ENSDORG00000028378	Srsf6	57	96.923	ENSPTIG00000019153	SRSF6	91	96.429	Panthera_tigris_altaica
ENSDORG00000028378	Srsf6	100	100.000	ENSPTRG00000044686	-	100	100.000	Pan_troglodytes
ENSDORG00000028378	Srsf6	90	84.887	ENSPTRG00000046274	-	100	87.138	Pan_troglodytes
ENSDORG00000028378	Srsf6	100	100.000	ENSPANG00000035224	SRSF6	100	100.000	Papio_anubis
ENSDORG00000028378	Srsf6	59	77.500	ENSPKIG00000015703	-	95	61.745	Paramormyrops_kingsleyae
ENSDORG00000028378	Srsf6	98	62.121	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSDORG00000028378	Srsf6	58	93.590	ENSPKIG00000015603	-	88	84.252	Paramormyrops_kingsleyae
ENSDORG00000028378	Srsf6	89	71.290	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSDORG00000028378	Srsf6	85	87.931	ENSPEMG00000022405	-	96	87.931	Peromyscus_maniculatus_bairdii
ENSDORG00000028378	Srsf6	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSDORG00000028378	Srsf6	58	92.308	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSDORG00000028378	Srsf6	88	64.780	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSDORG00000028378	Srsf6	58	92.308	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSDORG00000028378	Srsf6	59	91.139	ENSPREG00000001040	srsf6a	87	83.846	Poecilia_reticulata
ENSDORG00000028378	Srsf6	100	98.266	ENSPPYG00000011019	SRSF6	100	98.266	Pongo_abelii
ENSDORG00000028378	Srsf6	58	98.718	ENSPCAG00000010954	SRSF6	96	92.615	Procavia_capensis
ENSDORG00000028378	Srsf6	100	100.000	ENSPCOG00000026364	SRSF6	100	100.000	Propithecus_coquereli
ENSDORG00000028378	Srsf6	94	94.753	ENSPVAG00000015232	SRSF6	94	94.462	Pteropus_vampyrus
ENSDORG00000028378	Srsf6	80	65.818	ENSPNYG00000004944	-	58	83.696	Pundamilia_nyererei
ENSDORG00000028378	Srsf6	58	93.590	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSDORG00000028378	Srsf6	59	95.000	ENSPNAG00000023179	-	94	84.252	Pygocentrus_nattereri
ENSDORG00000028378	Srsf6	100	96.512	ENSRNOG00000006380	Srsf6	100	96.512	Rattus_norvegicus
ENSDORG00000028378	Srsf6	100	96.296	ENSRBIG00000041414	SRSF6	100	96.296	Rhinopithecus_bieti
ENSDORG00000028378	Srsf6	100	100.000	ENSRROG00000029989	SRSF6	100	100.000	Rhinopithecus_roxellana
ENSDORG00000028378	Srsf6	93	71.340	ENSSBOG00000034078	-	54	77.348	Saimiri_boliviensis_boliviensis
ENSDORG00000028378	Srsf6	100	100.000	ENSSBOG00000033708	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSDORG00000028378	Srsf6	58	97.436	ENSSHAG00000012805	SRSF6	95	89.329	Sarcophilus_harrisii
ENSDORG00000028378	Srsf6	56	94.737	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSDORG00000028378	Srsf6	55	93.243	ENSSFOG00015015169	SRSF6	60	89.130	Scleropages_formosus
ENSDORG00000028378	Srsf6	56	88.158	ENSSMAG00000017447	-	55	79.891	Scophthalmus_maximus
ENSDORG00000028378	Srsf6	59	92.500	ENSSMAG00000014861	-	95	67.969	Scophthalmus_maximus
ENSDORG00000028378	Srsf6	98	61.151	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSDORG00000028378	Srsf6	63	87.059	ENSSDUG00000011036	-	90	87.059	Seriola_dumerili
ENSDORG00000028378	Srsf6	63	87.059	ENSSLDG00000014858	-	90	87.059	Seriola_lalandi_dorsalis
ENSDORG00000028378	Srsf6	98	61.871	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSDORG00000028378	Srsf6	69	95.798	ENSSARG00000001602	SRSF6	89	94.348	Sorex_araneus
ENSDORG00000028378	Srsf6	100	97.037	ENSSPUG00000004967	SRSF6	100	97.037	Sphenodon_punctatus
ENSDORG00000028378	Srsf6	98	61.871	ENSSPAG00000002362	srsf6a	67	86.243	Stegastes_partitus
ENSDORG00000028378	Srsf6	63	84.706	ENSSPAG00000021913	-	86	84.706	Stegastes_partitus
ENSDORG00000028378	Srsf6	100	96.812	ENSSSCG00000007362	SRSF6	100	96.812	Sus_scrofa
ENSDORG00000028378	Srsf6	93	84.308	ENSTGUG00000003455	SRSF6	94	84.545	Taeniopygia_guttata
ENSDORG00000028378	Srsf6	59	92.500	ENSTRUG00000021397	-	87	92.500	Takifugu_rubripes
ENSDORG00000028378	Srsf6	88	69.967	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSDORG00000028378	Srsf6	85	93.151	ENSTBEG00000013448	SRSF6	93	93.151	Tupaia_belangeri
ENSDORG00000028378	Srsf6	68	97.021	ENSTTRG00000015410	SRSF6	89	96.522	Tursiops_truncatus
ENSDORG00000028378	Srsf6	100	99.259	ENSUAMG00000003559	SRSF6	100	99.259	Ursus_americanus
ENSDORG00000028378	Srsf6	57	96.923	ENSUMAG00000001154	SRSF6	91	96.429	Ursus_maritimus
ENSDORG00000028378	Srsf6	75	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSDORG00000028378	Srsf6	100	78.519	ENSVVUG00000019276	-	100	78.519	Vulpes_vulpes
ENSDORG00000028378	Srsf6	58	92.308	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus