EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000028628 (Gene tree)
Gene ID: 105990193
Gene Symbol: -
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 33072 bases
Position: chrKN672409.1:4687280-4720351
Accession: 105990193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000026253	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000028582	-	2544	XM_013022525	ENSDORP00000026253	205 (aa)	XP_012877979	A0A1S3FPM5
ENSDORT00000033988	-	381	-	ENSDORP00000016928	126 (aa)	-	UPI0000208584
ENSDORT00000002112	-	417	-	ENSDORP00000001978	138 (aa)	-	UPI00004704BB

Gene Model

Click here to download ENSDORG00000028628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000028628's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000028628	-	99	92.574	ENSDORG00000002511	Rab1b	100	92.574
ENSDORG00000028628	-	80	37.805	ENSDORG00000011469	-	86	37.805
ENSDORG00000028628	-	57	31.356	ENSDORG00000023904	Arl8b	61	31.356
ENSDORG00000028628	-	57	31.933	ENSDORG00000028437	Arl4a	59	31.933
ENSDORG00000028628	-	83	43.429	ENSDORG00000023618	Rab33b	76	43.429
ENSDORG00000028628	-	82	45.029	ENSDORG00000029496	Rab39b	80	45.029
ENSDORG00000028628	-	90	48.108	ENSDORG00000025014	Rab2a	99	45.714
ENSDORG00000028628	-	94	38.384	ENSDORG00000027784	Rab6a	94	38.384
ENSDORG00000028628	-	100	45.581	ENSDORG00000006304	Rab11b	99	45.581
ENSDORG00000028628	-	99	53.960	ENSDORG00000000972	Rab35	100	53.960
ENSDORG00000028628	-	94	44.845	ENSDORG00000028596	-	93	44.845
ENSDORG00000028628	-	80	47.619	ENSDORG00000024129	Rab33a	71	47.619
ENSDORG00000028628	-	75	37.419	ENSDORG00000000003	Rabl2	67	37.419
ENSDORG00000028628	-	87	43.333	ENSDORG00000029360	-	86	43.333
ENSDORG00000028628	-	96	52.792	ENSDORG00000001591	Rab13	97	52.792
ENSDORG00000028628	-	96	37.321	ENSDORG00000023607	Rab42	96	37.321
ENSDORG00000028628	-	94	36.410	ENSDORG00000026441	Rab6b	94	36.410
ENSDORG00000028628	-	57	33.058	ENSDORG00000004251	Arl2	61	33.058
ENSDORG00000028628	-	82	49.704	ENSDORG00000008920	Rab12	83	46.032
ENSDORG00000028628	-	97	42.029	ENSDORG00000002922	Rab25	95	42.029
ENSDORG00000028628	-	84	33.526	ENSDORG00000028344	Rab23	73	33.526
ENSDORG00000028628	-	81	50.602	ENSDORG00000010504	-	82	50.602
ENSDORG00000028628	-	76	39.623	ENSDORG00000009342	Rab9	79	39.623
ENSDORG00000028628	-	95	43.077	ENSDORG00000006819	Rab5c	89	43.077
ENSDORG00000028628	-	97	45.960	ENSDORG00000012048	Rab2b	99	45.960
ENSDORG00000028628	-	81	50.000	ENSDORG00000015066	-	82	50.000
ENSDORG00000028628	-	84	35.028	ENSDORG00000028079	Hras	93	35.028
ENSDORG00000028628	-	77	39.752	ENSDORG00000011452	Rab34	62	39.752
ENSDORG00000028628	-	57	31.092	ENSDORG00000028955	Arl4c	61	31.092
ENSDORG00000028628	-	80	50.909	ENSDORG00000025986	Rab15	78	50.909
ENSDORG00000028628	-	78	39.264	ENSDORG00000027671	-	79	39.264
ENSDORG00000028628	-	95	43.367	ENSDORG00000025063	Rab5b	90	43.367
ENSDORG00000028628	-	80	39.024	ENSDORG00000025267	Nras	86	39.024
ENSDORG00000028628	-	95	43.814	ENSDORG00000024958	-	90	43.814
ENSDORG00000028628	-	99	44.554	ENSDORG00000023851	Rab14	93	44.554
ENSDORG00000028628	-	80	35.329	ENSDORG00000025032	Mras	80	35.329

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000028628	-	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSDORG00000028628	-	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSDORG00000028628	-	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSDORG00000028628	-	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSDORG00000028628	-	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSDORG00000028628	-	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSDORG00000028628	-	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSDORG00000028628	-	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSDORG00000028628	-	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSDORG00000028628	-	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSDORG00000028628	-	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSDORG00000028628	-	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSDORG00000028628	-	96	100.000	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSDORG00000028628	-	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSDORG00000028628	-	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSDORG00000028628	-	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSDORG00000028628	-	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSDORG00000028628	-	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSDORG00000028628	-	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSDORG00000028628	-	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSDORG00000028628	-	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSDORG00000028628	-	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSDORG00000028628	-	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSDORG00000028628	-	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSDORG00000028628	-	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSDORG00000028628	-	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSDORG00000028628	-	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSDORG00000028628	-	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSDORG00000028628	-	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSDORG00000028628	-	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSDORG00000028628	-	99	97.537	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSDORG00000028628	-	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSDORG00000028628	-	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSDORG00000028628	-	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSDORG00000028628	-	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSDORG00000028628	-	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSDORG00000028628	-	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSDORG00000028628	-	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSDORG00000028628	-	99	97.549	ENSHGLG00100007994	RAB1A	99	97.549	Heterocephalus_glaber_male
ENSDORG00000028628	-	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSDORG00000028628	-	96	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSDORG00000028628	-	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSDORG00000028628	-	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSDORG00000028628	-	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSDORG00000028628	-	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSDORG00000028628	-	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSDORG00000028628	-	96	100.000	ENSMMUG00000021721	RAB1A	91	100.000	Macaca_mulatta
ENSDORG00000028628	-	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSDORG00000028628	-	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSDORG00000028628	-	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSDORG00000028628	-	96	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSDORG00000028628	-	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSDORG00000028628	-	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSDORG00000028628	-	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSDORG00000028628	-	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSDORG00000028628	-	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSDORG00000028628	-	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSDORG00000028628	-	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSDORG00000028628	-	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSDORG00000028628	-	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSDORG00000028628	-	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSDORG00000028628	-	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSDORG00000028628	-	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSDORG00000028628	-	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSDORG00000028628	-	96	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSDORG00000028628	-	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSDORG00000028628	-	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSDORG00000028628	-	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSDORG00000028628	-	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSDORG00000028628	-	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSDORG00000028628	-	96	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSDORG00000028628	-	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSDORG00000028628	-	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSDORG00000028628	-	96	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSDORG00000028628	-	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSDORG00000028628	-	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSDORG00000028628	-	99	96.552	ENSPSIG00000008028	RAB1A	99	96.552	Pelodiscus_sinensis
ENSDORG00000028628	-	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSDORG00000028628	-	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSDORG00000028628	-	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSDORG00000028628	-	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSDORG00000028628	-	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSDORG00000028628	-	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSDORG00000028628	-	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSDORG00000028628	-	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSDORG00000028628	-	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSDORG00000028628	-	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSDORG00000028628	-	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSDORG00000028628	-	98	98.010	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSDORG00000028628	-	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSDORG00000028628	-	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSDORG00000028628	-	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSDORG00000028628	-	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSDORG00000028628	-	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSDORG00000028628	-	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSDORG00000028628	-	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSDORG00000028628	-	96	100.000	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSDORG00000028628	-	97	99.495	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSDORG00000028628	-	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSDORG00000028628	-	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus