EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000028728 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 352 bases
Position: chrKN672592.1:33944-34295
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000019529	RNA_POL_M_15KD	PF02150.16	7.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000034517	-	318	-	ENSDORP00000019529	105 (aa)	-	UPI000BAD28BC

Gene Model

Click here to download ENSDORG00000028728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000028728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000028728	-	95	76.577	ENSDORG00000001852	-	89	76.577
ENSDORG00000028728	-	100	89.524	ENSDORG00000029259	-	97	89.524
ENSDORG00000028728	-	80	80.952	ENSDORG00000028026	-	98	80.952
ENSDORG00000028728	-	83	71.264	ENSDORG00000029333	-	100	71.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000028728	-	95	76.577	ENSG00000105258	POLR2I	89	76.577	Homo_sapiens
ENSDORG00000028728	-	95	74.775	ENSAPOG00000012409	polr2i	88	74.775	Acanthochromis_polyacanthus
ENSDORG00000028728	-	95	76.577	ENSAMEG00000000993	POLR2I	89	76.577	Ailuropoda_melanoleuca
ENSDORG00000028728	-	95	74.775	ENSAOCG00000024378	polr2i	88	74.775	Amphiprion_ocellaris
ENSDORG00000028728	-	95	74.775	ENSAPEG00000021748	polr2i	88	74.775	Amphiprion_percula
ENSDORG00000028728	-	95	73.874	ENSATEG00000000758	polr2i	88	73.874	Anabas_testudineus
ENSDORG00000028728	-	95	76.577	ENSANAG00000035318	POLR2I	89	76.577	Aotus_nancymaae
ENSDORG00000028728	-	95	74.775	ENSACLG00000001663	polr2i	88	74.775	Astatotilapia_calliptera
ENSDORG00000028728	-	95	74.775	ENSAMXG00000030198	polr2i	88	74.775	Astyanax_mexicanus
ENSDORG00000028728	-	95	76.577	ENSBTAG00000015002	POLR2I	89	76.577	Bos_taurus
ENSDORG00000028728	-	91	51.402	WBGene00022400	rpb-9	64	51.402	Caenorhabditis_elegans
ENSDORG00000028728	-	95	76.577	ENSCJAG00000009671	POLR2I	89	76.577	Callithrix_jacchus
ENSDORG00000028728	-	95	76.577	ENSCAFG00000006601	POLR2I	89	76.577	Canis_familiaris
ENSDORG00000028728	-	95	76.577	ENSCAFG00020018113	POLR2I	89	76.577	Canis_lupus_dingo
ENSDORG00000028728	-	95	76.577	ENSCHIG00000011961	POLR2I	89	76.577	Capra_hircus
ENSDORG00000028728	-	85	70.787	ENSTSYG00000031752	-	91	70.787	Carlito_syrichta
ENSDORG00000028728	-	95	76.577	ENSTSYG00000028318	-	95	75.510	Carlito_syrichta
ENSDORG00000028728	-	95	76.577	ENSCPOG00000012097	POLR2I	89	76.577	Cavia_porcellus
ENSDORG00000028728	-	95	76.577	ENSCCAG00000022138	-	89	76.577	Cebus_capucinus
ENSDORG00000028728	-	95	75.676	ENSCCAG00000032214	-	89	75.676	Cebus_capucinus
ENSDORG00000028728	-	95	76.577	ENSCATG00000017413	POLR2I	89	76.577	Cercocebus_atys
ENSDORG00000028728	-	95	76.577	ENSCLAG00000011800	POLR2I	89	76.577	Chinchilla_lanigera
ENSDORG00000028728	-	95	76.577	ENSCSAG00000004254	POLR2I	89	76.577	Chlorocebus_sabaeus
ENSDORG00000028728	-	95	76.577	ENSCPBG00000006726	POLR2I	89	76.577	Chrysemys_picta_bellii
ENSDORG00000028728	-	95	62.162	ENSCSAVG00000010630	-	88	62.162	Ciona_savignyi
ENSDORG00000028728	-	81	77.083	ENSCANG00000031951	POLR2I	91	77.083	Colobus_angolensis_palliatus
ENSDORG00000028728	-	95	73.874	ENSCSEG00000002213	polr2i	88	73.874	Cynoglossus_semilaevis
ENSDORG00000028728	-	95	74.775	ENSCVAG00000014797	polr2i	88	74.775	Cyprinodon_variegatus
ENSDORG00000028728	-	95	73.874	ENSDARG00000040443	polr2i	88	73.874	Danio_rerio
ENSDORG00000028728	-	95	76.577	ENSDNOG00000015842	POLR2I	89	76.577	Dasypus_novemcinctus
ENSDORG00000028728	-	90	64.151	FBgn0004855	RpII15	82	64.151	Drosophila_melanogaster
ENSDORG00000028728	-	95	76.577	ENSETEG00000012679	POLR2I	89	76.577	Echinops_telfairi
ENSDORG00000028728	-	95	72.072	ENSEBUG00000007333	polr2i	95	70.408	Eptatretus_burgeri
ENSDORG00000028728	-	95	76.577	ENSEASG00005002231	POLR2I	89	76.577	Equus_asinus_asinus
ENSDORG00000028728	-	95	76.577	ENSECAG00000013654	POLR2I	89	76.577	Equus_caballus
ENSDORG00000028728	-	95	76.577	ENSEEUG00000002113	POLR2I	89	76.577	Erinaceus_europaeus
ENSDORG00000028728	-	95	74.775	ENSELUG00000018012	polr2i	88	74.775	Esox_lucius
ENSDORG00000028728	-	95	76.577	ENSFCAG00000026052	POLR2I	89	76.577	Felis_catus
ENSDORG00000028728	-	95	76.577	ENSFDAG00000011350	POLR2I	89	76.577	Fukomys_damarensis
ENSDORG00000028728	-	95	73.874	ENSFHEG00000015659	polr2i	88	73.874	Fundulus_heteroclitus
ENSDORG00000028728	-	95	74.775	ENSGMOG00000013806	polr2i	88	74.775	Gadus_morhua
ENSDORG00000028728	-	95	75.676	ENSGALG00000038595	POLR2I	85	75.676	Gallus_gallus
ENSDORG00000028728	-	95	73.874	ENSGAFG00000001037	polr2i	88	73.874	Gambusia_affinis
ENSDORG00000028728	-	95	74.775	ENSGACG00000006679	polr2i	88	74.775	Gasterosteus_aculeatus
ENSDORG00000028728	-	95	76.577	ENSGAGG00000015806	POLR2I	89	76.577	Gopherus_agassizii
ENSDORG00000028728	-	95	76.577	ENSGGOG00000015426	POLR2I	89	76.577	Gorilla_gorilla
ENSDORG00000028728	-	95	74.775	ENSHBUG00000004140	polr2i	88	74.775	Haplochromis_burtoni
ENSDORG00000028728	-	83	75.510	ENSHGLG00000007388	POLR2I	95	75.510	Heterocephalus_glaber_female
ENSDORG00000028728	-	83	75.510	ENSHGLG00100014515	POLR2I	95	75.510	Heterocephalus_glaber_male
ENSDORG00000028728	-	95	74.775	ENSHCOG00000010967	polr2i	88	74.775	Hippocampus_comes
ENSDORG00000028728	-	95	74.775	ENSIPUG00000001127	polr2i	88	74.775	Ictalurus_punctatus
ENSDORG00000028728	-	95	76.577	ENSSTOG00000009411	POLR2I	89	76.577	Ictidomys_tridecemlineatus
ENSDORG00000028728	-	95	76.577	ENSJJAG00000014400	Polr2i	89	76.577	Jaculus_jaculus
ENSDORG00000028728	-	95	73.874	ENSKMAG00000001567	polr2i	88	73.874	Kryptolebias_marmoratus
ENSDORG00000028728	-	95	74.775	ENSLBEG00000001220	polr2i	88	74.775	Labrus_bergylta
ENSDORG00000028728	-	65	73.418	ENSLBEG00000028538	-	89	73.418	Labrus_bergylta
ENSDORG00000028728	-	95	75.676	ENSLACG00000009590	POLR2I	89	75.676	Latimeria_chalumnae
ENSDORG00000028728	-	95	74.775	ENSLOCG00000014818	polr2i	88	74.775	Lepisosteus_oculatus
ENSDORG00000028728	-	95	76.577	ENSLAFG00000015527	POLR2I	89	76.577	Loxodonta_africana
ENSDORG00000028728	-	95	76.577	ENSMFAG00000039443	POLR2I	89	76.577	Macaca_fascicularis
ENSDORG00000028728	-	83	75.510	ENSMMUG00000000522	POLR2I	95	75.510	Macaca_mulatta
ENSDORG00000028728	-	95	76.577	ENSMNEG00000029421	POLR2I	89	76.577	Macaca_nemestrina
ENSDORG00000028728	-	95	76.577	ENSMLEG00000039720	POLR2I	89	76.577	Mandrillus_leucophaeus
ENSDORG00000028728	-	95	73.874	ENSMAMG00000013970	polr2i	88	73.874	Mastacembelus_armatus
ENSDORG00000028728	-	95	74.775	ENSMZEG00005013082	polr2i	88	74.775	Maylandia_zebra
ENSDORG00000028728	-	95	75.676	ENSMGAG00000008576	POLR2I	89	75.676	Meleagris_gallopavo
ENSDORG00000028728	-	95	76.577	ENSMAUG00000001001	Polr2i	89	76.577	Mesocricetus_auratus
ENSDORG00000028728	-	95	76.577	ENSMICG00000010241	POLR2I	89	76.577	Microcebus_murinus
ENSDORG00000028728	-	95	76.577	ENSMOCG00000011984	Polr2i	89	76.577	Microtus_ochrogaster
ENSDORG00000028728	-	83	73.469	ENSMMOG00000004945	polr2i	95	73.469	Mola_mola
ENSDORG00000028728	-	95	76.577	ENSMODG00000014172	POLR2I	89	76.577	Monodelphis_domestica
ENSDORG00000028728	-	95	76.577	MGP_CAROLIEiJ_G0029507	Polr2i	95	75.510	Mus_caroli
ENSDORG00000028728	-	95	76.577	ENSMUSG00000019738	Polr2i	100	75.904	Mus_musculus
ENSDORG00000028728	-	95	76.577	MGP_PahariEiJ_G0012741	Polr2i	100	75.904	Mus_pahari
ENSDORG00000028728	-	95	76.577	MGP_SPRETEiJ_G0030603	Polr2i	95	75.510	Mus_spretus
ENSDORG00000028728	-	95	76.577	ENSMPUG00000005702	POLR2I	89	76.577	Mustela_putorius_furo
ENSDORG00000028728	-	95	76.577	ENSMLUG00000012317	POLR2I	89	76.577	Myotis_lucifugus
ENSDORG00000028728	-	95	76.577	ENSNGAG00000014966	Polr2i	89	76.577	Nannospalax_galili
ENSDORG00000028728	-	95	74.775	ENSNBRG00000000723	polr2i	88	74.775	Neolamprologus_brichardi
ENSDORG00000028728	-	95	76.577	ENSNLEG00000011691	POLR2I	89	76.577	Nomascus_leucogenys
ENSDORG00000028728	-	95	76.577	ENSOPRG00000001789	-	89	76.577	Ochotona_princeps
ENSDORG00000028728	-	95	76.577	ENSOPRG00000008681	-	89	76.577	Ochotona_princeps
ENSDORG00000028728	-	95	76.577	ENSODEG00000015015	-	89	76.577	Octodon_degus
ENSDORG00000028728	-	95	68.627	ENSODEG00000017901	-	84	68.627	Octodon_degus
ENSDORG00000028728	-	95	74.775	ENSONIG00000005397	polr2i	88	74.775	Oreochromis_niloticus
ENSDORG00000028728	-	95	76.577	ENSOCUG00000013044	POLR2I	89	76.577	Oryctolagus_cuniculus
ENSDORG00000028728	-	95	75.676	ENSOCUG00000024998	-	89	75.676	Oryctolagus_cuniculus
ENSDORG00000028728	-	95	73.874	ENSORLG00000013308	polr2i	88	73.874	Oryzias_latipes
ENSDORG00000028728	-	95	73.874	ENSORLG00020011281	polr2i	88	73.874	Oryzias_latipes_hni
ENSDORG00000028728	-	95	73.874	ENSORLG00015019529	polr2i	88	73.874	Oryzias_latipes_hsok
ENSDORG00000028728	-	95	73.874	ENSOMEG00000012586	polr2i	88	73.874	Oryzias_melastigma
ENSDORG00000028728	-	95	76.577	ENSOGAG00000024254	POLR2I	89	76.577	Otolemur_garnettii
ENSDORG00000028728	-	95	76.577	ENSOARG00000005266	POLR2I	89	76.577	Ovis_aries
ENSDORG00000028728	-	95	76.577	ENSPPAG00000033446	POLR2I	89	76.577	Pan_paniscus
ENSDORG00000028728	-	95	76.577	ENSPPRG00000007194	POLR2I	89	76.577	Panthera_pardus
ENSDORG00000028728	-	95	76.577	ENSPTIG00000018661	POLR2I	89	76.577	Panthera_tigris_altaica
ENSDORG00000028728	-	95	76.577	ENSPTRG00000010885	POLR2I	89	76.577	Pan_troglodytes
ENSDORG00000028728	-	95	76.577	ENSPANG00000004508	POLR2I	89	76.577	Papio_anubis
ENSDORG00000028728	-	95	74.775	ENSPKIG00000001086	polr2i	88	74.775	Paramormyrops_kingsleyae
ENSDORG00000028728	-	83	75.510	ENSPSIG00000011560	POLR2I	95	75.510	Pelodiscus_sinensis
ENSDORG00000028728	-	95	69.565	ENSPMGG00000016154	polr2i	88	69.565	Periophthalmus_magnuspinnatus
ENSDORG00000028728	-	95	76.577	ENSPEMG00000014212	Polr2i	89	76.577	Peromyscus_maniculatus_bairdii
ENSDORG00000028728	-	95	76.577	ENSPCIG00000015436	-	89	76.577	Phascolarctos_cinereus
ENSDORG00000028728	-	95	73.874	ENSPFOG00000016816	polr2i	88	73.874	Poecilia_formosa
ENSDORG00000028728	-	95	73.874	ENSPLAG00000010639	polr2i	88	73.874	Poecilia_latipinna
ENSDORG00000028728	-	95	73.874	ENSPMEG00000005956	polr2i	88	73.874	Poecilia_mexicana
ENSDORG00000028728	-	95	73.874	ENSPREG00000004227	polr2i	88	73.874	Poecilia_reticulata
ENSDORG00000028728	-	95	76.577	ENSPPYG00000009897	POLR2I	89	76.577	Pongo_abelii
ENSDORG00000028728	-	95	76.577	ENSPCAG00000003494	POLR2I	89	76.577	Procavia_capensis
ENSDORG00000028728	-	95	76.577	ENSPCOG00000018643	POLR2I	89	76.577	Propithecus_coquereli
ENSDORG00000028728	-	95	76.577	ENSPVAG00000012883	POLR2I	89	76.577	Pteropus_vampyrus
ENSDORG00000028728	-	95	74.775	ENSPNYG00000011908	polr2i	88	74.775	Pundamilia_nyererei
ENSDORG00000028728	-	95	74.775	ENSPNAG00000005859	polr2i	88	74.775	Pygocentrus_nattereri
ENSDORG00000028728	-	95	76.577	ENSRNOG00000020799	LOC103690054	89	76.577	Rattus_norvegicus
ENSDORG00000028728	-	95	76.577	ENSRNOG00000050560	Polr2i	89	76.577	Rattus_norvegicus
ENSDORG00000028728	-	95	76.577	ENSRBIG00000037225	POLR2I	89	76.577	Rhinopithecus_bieti
ENSDORG00000028728	-	95	76.577	ENSRROG00000042843	POLR2I	89	76.577	Rhinopithecus_roxellana
ENSDORG00000028728	-	90	41.509	YGL070C	RPB9	86	41.509	Saccharomyces_cerevisiae
ENSDORG00000028728	-	96	77.451	ENSSBOG00000022998	-	65	78.218	Saimiri_boliviensis_boliviensis
ENSDORG00000028728	-	95	76.577	ENSSBOG00000030799	-	89	76.577	Saimiri_boliviensis_boliviensis
ENSDORG00000028728	-	95	74.775	ENSSFOG00015022523	polr2i	88	74.775	Scleropages_formosus
ENSDORG00000028728	-	95	73.874	ENSSMAG00000003335	polr2i	88	73.874	Scophthalmus_maximus
ENSDORG00000028728	-	95	73.874	ENSSDUG00000005483	polr2i	88	73.874	Seriola_dumerili
ENSDORG00000028728	-	95	73.874	ENSSLDG00000009341	polr2i	88	73.874	Seriola_lalandi_dorsalis
ENSDORG00000028728	-	95	76.577	ENSSARG00000009331	POLR2I	89	76.577	Sorex_araneus
ENSDORG00000028728	-	96	75.893	ENSSPUG00000012658	POLR2I	90	75.893	Sphenodon_punctatus
ENSDORG00000028728	-	95	74.775	ENSSPAG00000015734	polr2i	88	74.775	Stegastes_partitus
ENSDORG00000028728	-	95	76.577	ENSSSCG00000039196	POLR2I	89	76.577	Sus_scrofa
ENSDORG00000028728	-	95	74.775	ENSTRUG00000022235	polr2i	88	74.775	Takifugu_rubripes
ENSDORG00000028728	-	95	74.775	ENSTNIG00000011737	polr2i	88	74.775	Tetraodon_nigroviridis
ENSDORG00000028728	-	95	76.577	ENSTTRG00000003919	POLR2I	89	76.577	Tursiops_truncatus
ENSDORG00000028728	-	95	76.577	ENSUAMG00000020575	POLR2I	89	76.577	Ursus_americanus
ENSDORG00000028728	-	95	76.577	ENSUMAG00000020809	POLR2I	89	76.577	Ursus_maritimus
ENSDORG00000028728	-	95	76.577	ENSVVUG00000013588	POLR2I	89	76.577	Vulpes_vulpes
ENSDORG00000028728	-	95	73.874	ENSXCOG00000001119	polr2i	88	73.874	Xiphophorus_couchianus
ENSDORG00000028728	-	95	73.874	ENSXMAG00000021278	polr2i	88	73.874	Xiphophorus_maculatus