EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000028966 (Gene tree)
Gene ID: 105992522
Gene Symbol: -
Alias: -
Full Name: poly(A) binding protein nuclear 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 5352 bases
Position: chrKN672430.1:5803412-5808763
Accession: 105992522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000025118	RRM_1	PF00076.22	6.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000035264	-	2546	XM_013025402	ENSDORP00000025118	306 (aa)	XP_012880856	A0A1S3FWA9

Gene Model

Click here to download ENSDORG00000028966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000028966's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000028966	-	58	73.596	ENSDORG00000023928	-	92	72.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000028966	-	100	98.693	ENSG00000100836	PABPN1	100	98.876	Homo_sapiens
ENSDORG00000028966	-	62	98.942	ENSG00000258643	BCL2L2-PABPN1	57	98.942	Homo_sapiens
ENSDORG00000028966	-	86	69.318	ENSAPOG00000016425	pabpn1	86	81.068	Acanthochromis_polyacanthus
ENSDORG00000028966	-	62	98.942	ENSAMEG00000007048	BCL2L2-PABPN1	100	98.942	Ailuropoda_melanoleuca
ENSDORG00000028966	-	84	66.540	ENSACIG00000021744	pabpn1	94	80.952	Amphilophus_citrinellus
ENSDORG00000028966	-	86	69.318	ENSAOCG00000015805	pabpn1	86	81.068	Amphiprion_ocellaris
ENSDORG00000028966	-	86	69.318	ENSAPEG00000009623	pabpn1	86	81.068	Amphiprion_percula
ENSDORG00000028966	-	86	69.697	ENSATEG00000020531	pabpn1	86	81.553	Anabas_testudineus
ENSDORG00000028966	-	66	87.192	ENSACAG00000006185	-	74	86.124	Anolis_carolinensis
ENSDORG00000028966	-	100	89.542	ENSANAG00000024513	-	100	89.542	Aotus_nancymaae
ENSDORG00000028966	-	84	66.288	ENSACLG00000016374	pabpn1	66	80.402	Astatotilapia_calliptera
ENSDORG00000028966	-	86	70.833	ENSAMXG00000000452	pabpn1	94	82.738	Astyanax_mexicanus
ENSDORG00000028966	-	92	76.157	ENSBTAG00000053753	-	91	75.801	Bos_taurus
ENSDORG00000028966	-	57	95.402	ENSBTAG00000050594	-	71	95.000	Bos_taurus
ENSDORG00000028966	-	100	98.039	ENSBTAG00000006884	PABPN1	100	98.039	Bos_taurus
ENSDORG00000028966	-	58	97.191	ENSCJAG00000004407	-	89	97.191	Callithrix_jacchus
ENSDORG00000028966	-	100	98.693	ENSCJAG00000007960	-	100	98.693	Callithrix_jacchus
ENSDORG00000028966	-	100	95.752	ENSCAFG00000011482	PABPN1	100	95.752	Canis_familiaris
ENSDORG00000028966	-	100	98.693	ENSCAFG00020006651	-	100	98.693	Canis_lupus_dingo
ENSDORG00000028966	-	100	98.693	ENSCAFG00020007298	-	100	98.693	Canis_lupus_dingo
ENSDORG00000028966	-	100	98.366	ENSCHIG00000012184	PABPN1	100	98.366	Capra_hircus
ENSDORG00000028966	-	62	98.942	ENSTSYG00000033996	BCL2L2-PABPN1	100	98.876	Carlito_syrichta
ENSDORG00000028966	-	100	99.020	ENSCPOG00000025574	PABPN1	100	99.020	Cavia_porcellus
ENSDORG00000028966	-	100	98.693	ENSCCAG00000033954	BCL2L2-PABPN1	100	98.693	Cebus_capucinus
ENSDORG00000028966	-	100	98.693	ENSCATG00000038536	BCL2L2-PABPN1	100	98.693	Cercocebus_atys
ENSDORG00000028966	-	67	80.488	ENSCLAG00000012423	PABPN1	62	80.488	Chinchilla_lanigera
ENSDORG00000028966	-	100	97.059	ENSCSAG00000016036	PABPN1	100	97.059	Chlorocebus_sabaeus
ENSDORG00000028966	-	64	87.562	ENSCHOG00000004798	BCL2L2-PABPN1	87	87.562	Choloepus_hoffmanni
ENSDORG00000028966	-	55	91.617	ENSCPBG00000026060	-	94	91.617	Chrysemys_picta_bellii
ENSDORG00000028966	-	65	61.692	ENSCING00000012468	-	84	64.179	Ciona_intestinalis
ENSDORG00000028966	-	58	59.551	ENSCSAVG00000002001	-	93	61.078	Ciona_savignyi
ENSDORG00000028966	-	62	98.942	ENSCANG00000009750	BCL2L2-PABPN1	100	98.876	Colobus_angolensis_palliatus
ENSDORG00000028966	-	96	81.356	ENSCANG00000030980	-	74	82.927	Colobus_angolensis_palliatus
ENSDORG00000028966	-	100	97.059	ENSCGRG00001019696	Pabpn1	100	98.315	Cricetulus_griseus_chok1gshd
ENSDORG00000028966	-	58	98.315	ENSCGRG00000011102	Pabpn1	100	98.315	Cricetulus_griseus_crigri
ENSDORG00000028966	-	68	78.972	ENSCSEG00000008774	pabpn1	89	79.524	Cynoglossus_semilaevis
ENSDORG00000028966	-	86	67.045	ENSCVAG00000003152	pabpn1	86	80.097	Cyprinodon_variegatus
ENSDORG00000028966	-	68	82.297	ENSDARG00000045373	pabpn1	86	82.524	Danio_rerio
ENSDORG00000028966	-	100	98.693	ENSDNOG00000023682	PABPN1	100	98.693	Dasypus_novemcinctus
ENSDORG00000028966	-	62	62.827	FBgn0005648	Pabp2	82	62.827	Drosophila_melanogaster
ENSDORG00000028966	-	63	79.487	ENSEBUG00000002322	pabpn1	83	79.897	Eptatretus_burgeri
ENSDORG00000028966	-	100	98.693	ENSEASG00005011716	PABPN1	100	98.693	Equus_asinus_asinus
ENSDORG00000028966	-	99	99.007	ENSECAG00000011652	PABPN1	99	98.980	Equus_caballus
ENSDORG00000028966	-	93	91.901	ENSEEUG00000012973	-	72	93.839	Erinaceus_europaeus
ENSDORG00000028966	-	86	72.727	ENSELUG00000022654	pabpn1	85	84.466	Esox_lucius
ENSDORG00000028966	-	100	98.693	ENSFCAG00000031922	PABPN1	100	98.693	Felis_catus
ENSDORG00000028966	-	58	98.876	ENSFDAG00000018381	BCL2L2-PABPN1	100	98.876	Fukomys_damarensis
ENSDORG00000028966	-	86	65.530	ENSFHEG00000007215	pabpn1	86	79.126	Fundulus_heteroclitus
ENSDORG00000028966	-	64	82.741	ENSGMOG00000003922	pabpn1	66	82.990	Gadus_morhua
ENSDORG00000028966	-	63	88.776	ENSGALG00000052930	-	60	88.835	Gallus_gallus
ENSDORG00000028966	-	86	69.434	ENSGAFG00000017099	pabpn1	86	81.159	Gambusia_affinis
ENSDORG00000028966	-	86	66.667	ENSGACG00000002167	pabpn1	90	75.676	Gasterosteus_aculeatus
ENSDORG00000028966	-	100	98.693	ENSGGOG00000022683	-	100	98.693	Gorilla_gorilla
ENSDORG00000028966	-	93	80.769	ENSGGOG00000025919	-	98	83.108	Gorilla_gorilla
ENSDORG00000028966	-	92	76.950	ENSGGOG00000039675	-	76	80.488	Gorilla_gorilla
ENSDORG00000028966	-	86	69.697	ENSHBUG00000019523	pabpn1	86	81.553	Haplochromis_burtoni
ENSDORG00000028966	-	100	99.020	ENSHGLG00000002927	-	100	99.020	Heterocephalus_glaber_female
ENSDORG00000028966	-	92	75.445	ENSHGLG00000018588	-	71	81.905	Heterocephalus_glaber_female
ENSDORG00000028966	-	55	76.048	ENSHGLG00000009842	-	93	76.048	Heterocephalus_glaber_female
ENSDORG00000028966	-	92	69.643	ENSHGLG00100015565	-	72	81.905	Heterocephalus_glaber_male
ENSDORG00000028966	-	55	88.304	ENSHGLG00100018935	-	94	88.304	Heterocephalus_glaber_male
ENSDORG00000028966	-	58	100.000	ENSHGLG00100006673	-	100	99.438	Heterocephalus_glaber_male
ENSDORG00000028966	-	86	66.920	ENSHCOG00000004655	pabpn1	86	81.553	Hippocampus_comes
ENSDORG00000028966	-	86	70.076	ENSIPUG00000008085	PABPN1	86	82.039	Ictalurus_punctatus
ENSDORG00000028966	-	67	74.886	ENSIPUG00000000180	-	94	75.463	Ictalurus_punctatus
ENSDORG00000028966	-	58	98.876	ENSSTOG00000029847	BCL2L2-PABPN1	100	98.876	Ictidomys_tridecemlineatus
ENSDORG00000028966	-	58	98.876	ENSJJAG00000023507	Gm20521	100	98.876	Jaculus_jaculus
ENSDORG00000028966	-	68	80.476	ENSKMAG00000018748	pabpn1	86	80.676	Kryptolebias_marmoratus
ENSDORG00000028966	-	86	69.697	ENSLBEG00000027266	pabpn1	86	81.553	Labrus_bergylta
ENSDORG00000028966	-	58	87.079	ENSLACG00000000646	pabpn1	83	84.817	Latimeria_chalumnae
ENSDORG00000028966	-	68	63.810	ENSLOCG00000004694	pabpn1l	95	64.251	Lepisosteus_oculatus
ENSDORG00000028966	-	82	70.238	ENSLOCG00000000796	pabpn1	69	83.505	Lepisosteus_oculatus
ENSDORG00000028966	-	62	98.942	ENSMFAG00000032183	BCL2L2-PABPN1	100	98.876	Macaca_fascicularis
ENSDORG00000028966	-	97	77.258	ENSMMUG00000048382	-	68	81.863	Macaca_mulatta
ENSDORG00000028966	-	62	98.942	ENSMMUG00000014747	BCL2L2-PABPN1	100	98.630	Macaca_mulatta
ENSDORG00000028966	-	74	82.051	ENSMNEG00000035750	-	99	91.489	Macaca_nemestrina
ENSDORG00000028966	-	100	98.693	ENSMNEG00000045065	BCL2L2-PABPN1	100	98.693	Macaca_nemestrina
ENSDORG00000028966	-	62	98.942	ENSMLEG00000043862	BCL2L2-PABPN1	100	98.876	Mandrillus_leucophaeus
ENSDORG00000028966	-	97	72.973	ENSMLEG00000034623	-	99	89.362	Mandrillus_leucophaeus
ENSDORG00000028966	-	82	69.841	ENSMAMG00000007979	pabpn1	68	81.281	Mastacembelus_armatus
ENSDORG00000028966	-	82	69.444	ENSMZEG00005011904	pabpn1	66	81.959	Maylandia_zebra
ENSDORG00000028966	-	98	97.010	ENSMAUG00000007383	Gm20521	99	97.010	Mesocricetus_auratus
ENSDORG00000028966	-	100	99.020	ENSMICG00000010002	BCL2L2-PABPN1	100	99.020	Microcebus_murinus
ENSDORG00000028966	-	100	96.732	ENSMOCG00000018557	Gm20521	100	96.732	Microtus_ochrogaster
ENSDORG00000028966	-	86	70.076	ENSMMOG00000005405	pabpn1	86	82.039	Mola_mola
ENSDORG00000028966	-	68	95.694	ENSMODG00000004535	-	69	95.694	Monodelphis_domestica
ENSDORG00000028966	-	82	69.444	ENSMALG00000019612	pabpn1	67	81.281	Monopterus_albus
ENSDORG00000028966	-	100	96.078	MGP_CAROLIEiJ_G0019277	Pabpn1	100	96.629	Mus_caroli
ENSDORG00000028966	-	62	96.825	MGP_CAROLIEiJ_G0019276	Gm20521	57	96.825	Mus_caroli
ENSDORG00000028966	-	62	97.354	ENSMUSG00000092232	Gm20521	57	97.354	Mus_musculus
ENSDORG00000028966	-	100	96.405	ENSMUSG00000022194	Pabpn1	100	97.191	Mus_musculus
ENSDORG00000028966	-	100	96.405	MGP_PahariEiJ_G0030295	Pabpn1	100	97.191	Mus_pahari
ENSDORG00000028966	-	62	97.354	MGP_PahariEiJ_G0030294	Gm20521	57	97.354	Mus_pahari
ENSDORG00000028966	-	100	96.405	MGP_SPRETEiJ_G0020166	Pabpn1	100	97.191	Mus_spretus
ENSDORG00000028966	-	62	97.354	MGP_SPRETEiJ_G0020165	Gm20521	57	97.354	Mus_spretus
ENSDORG00000028966	-	54	99.398	ENSMPUG00000006775	-	99	99.398	Mustela_putorius_furo
ENSDORG00000028966	-	95	77.931	ENSMLUG00000028677	-	75	93.171	Myotis_lucifugus
ENSDORG00000028966	-	62	96.825	ENSMLUG00000003800	-	100	96.825	Myotis_lucifugus
ENSDORG00000028966	-	92	87.676	ENSMLUG00000012452	-	70	91.549	Myotis_lucifugus
ENSDORG00000028966	-	62	98.942	ENSNGAG00000019529	Gm20521	57	98.942	Nannospalax_galili
ENSDORG00000028966	-	82	69.444	ENSNBRG00000023955	pabpn1	94	80.952	Neolamprologus_brichardi
ENSDORG00000028966	-	97	75.168	ENSNLEG00000030598	-	79	80.569	Nomascus_leucogenys
ENSDORG00000028966	-	69	98.578	ENSNLEG00000015007	-	75	98.578	Nomascus_leucogenys
ENSDORG00000028966	-	92	82.918	ENSODEG00000003739	-	75	86.878	Octodon_degus
ENSDORG00000028966	-	100	99.020	ENSODEG00000002083	BCL2L2-PABPN1	100	99.020	Octodon_degus
ENSDORG00000028966	-	58	87.079	ENSODEG00000011555	-	89	86.826	Octodon_degus
ENSDORG00000028966	-	82	69.444	ENSONIG00000008112	pabpn1	66	81.959	Oreochromis_niloticus
ENSDORG00000028966	-	99	96.711	ENSOCUG00000016174	PABPN1	100	96.711	Oryctolagus_cuniculus
ENSDORG00000028966	-	64	82.234	ENSORLG00000027900	pabpn1	83	80.100	Oryzias_latipes
ENSDORG00000028966	-	61	83.957	ENSORLG00020004681	pabpn1	67	81.773	Oryzias_latipes_hni
ENSDORG00000028966	-	68	81.818	ENSORLG00015000018	pabpn1	86	82.039	Oryzias_latipes_hsok
ENSDORG00000028966	-	68	78.744	ENSOMEG00000016618	pabpn1	72	78.922	Oryzias_melastigma
ENSDORG00000028966	-	100	98.693	ENSOGAG00000008710	PABPN1	100	98.693	Otolemur_garnettii
ENSDORG00000028966	-	62	98.942	ENSOARG00000019336	BCL2L2-PABPN1	52	98.942	Ovis_aries
ENSDORG00000028966	-	55	82.036	ENSPPAG00000039421	-	93	82.036	Pan_paniscus
ENSDORG00000028966	-	62	98.942	ENSPPAG00000028984	BCL2L2-PABPN1	99	99.398	Pan_paniscus
ENSDORG00000028966	-	100	98.693	ENSPPRG00000010567	PABPN1	100	98.693	Panthera_pardus
ENSDORG00000028966	-	58	98.876	ENSPTIG00000001063	BCL2L2-PABPN1	100	98.876	Panthera_tigris_altaica
ENSDORG00000028966	-	92	72.340	ENSPTRG00000047273	-	95	66.323	Pan_troglodytes
ENSDORG00000028966	-	100	98.693	ENSPTRG00000006167	BCL2L2	100	98.693	Pan_troglodytes
ENSDORG00000028966	-	97	77.703	ENSPANG00000023326	-	99	91.489	Papio_anubis
ENSDORG00000028966	-	100	98.693	ENSPANG00000021100	BCL2L2-PABPN1	100	98.693	Papio_anubis
ENSDORG00000028966	-	52	71.429	ENSPKIG00000008340	pabpn1l	92	63.636	Paramormyrops_kingsleyae
ENSDORG00000028966	-	68	80.861	ENSPKIG00000018052	pabpn1	86	81.553	Paramormyrops_kingsleyae
ENSDORG00000028966	-	62	84.737	ENSPKIG00000008144	-	67	81.773	Paramormyrops_kingsleyae
ENSDORG00000028966	-	82	69.048	ENSPMGG00000022027	pabpn1	69	81.443	Periophthalmus_magnuspinnatus
ENSDORG00000028966	-	100	97.059	ENSPEMG00000008332	Gm20521	100	97.059	Peromyscus_maniculatus_bairdii
ENSDORG00000028966	-	54	77.778	ENSPMAG00000006212	pabpn1	84	75.369	Petromyzon_marinus
ENSDORG00000028966	-	69	96.209	ENSPCIG00000027751	-	69	96.209	Phascolarctos_cinereus
ENSDORG00000028966	-	86	66.792	ENSPFOG00000010351	pabpn1	86	79.710	Poecilia_formosa
ENSDORG00000028966	-	82	68.775	ENSPLAG00000022696	pabpn1	68	80.392	Poecilia_latipinna
ENSDORG00000028966	-	86	66.792	ENSPMEG00000020856	pabpn1	86	79.710	Poecilia_mexicana
ENSDORG00000028966	-	86	67.170	ENSPREG00000011278	pabpn1	86	80.193	Poecilia_reticulata
ENSDORG00000028966	-	96	93.197	ENSPPYG00000005663	PABPN1	99	93.197	Pongo_abelii
ENSDORG00000028966	-	68	84.834	ENSPCAG00000005902	PABPN1	72	84.834	Procavia_capensis
ENSDORG00000028966	-	100	99.020	ENSPCOG00000028047	BCL2L2-PABPN1	100	99.020	Propithecus_coquereli
ENSDORG00000028966	-	69	94.787	ENSPVAG00000005270	PABPN1	67	96.078	Pteropus_vampyrus
ENSDORG00000028966	-	86	69.697	ENSPNYG00000013182	pabpn1	86	81.553	Pundamilia_nyererei
ENSDORG00000028966	-	86	70.833	ENSPNAG00000023526	pabpn1	86	83.010	Pygocentrus_nattereri
ENSDORG00000028966	-	65	63.000	ENSPNAG00000021666	pabpn1l	94	64.677	Pygocentrus_nattereri
ENSDORG00000028966	-	100	96.732	ENSRNOG00000042195	Pabpn1	100	96.732	Rattus_norvegicus
ENSDORG00000028966	-	92	83.929	ENSRBIG00000042811	-	88	84.834	Rhinopithecus_bieti
ENSDORG00000028966	-	58	99.435	ENSRBIG00000040762	BCL2L2-PABPN1	55	99.435	Rhinopithecus_bieti
ENSDORG00000028966	-	97	82.333	ENSRBIG00000039547	-	75	84.390	Rhinopithecus_bieti
ENSDORG00000028966	-	92	80.714	ENSRROG00000036409	-	67	81.567	Rhinopithecus_roxellana
ENSDORG00000028966	-	99	82.295	ENSRROG00000040409	-	75	84.878	Rhinopithecus_roxellana
ENSDORG00000028966	-	58	99.435	ENSRROG00000045535	BCL2L2-PABPN1	100	98.876	Rhinopithecus_roxellana
ENSDORG00000028966	-	62	92.574	ENSSBOG00000026930	BCL2L2-PABPN1	99	99.398	Saimiri_boliviensis_boliviensis
ENSDORG00000028966	-	71	86.239	ENSSHAG00000014841	-	87	96.296	Sarcophilus_harrisii
ENSDORG00000028966	-	87	64.528	ENSSHAG00000007707	-	89	73.934	Sarcophilus_harrisii
ENSDORG00000028966	-	64	63.265	ENSSFOG00015015833	pabpn1l	88	63.636	Scleropages_formosus
ENSDORG00000028966	-	71	76.923	ENSSFOG00015012565	pabpn1	90	80.583	Scleropages_formosus
ENSDORG00000028966	-	86	68.939	ENSSFOG00015014718	pabpn1	86	81.068	Scleropages_formosus
ENSDORG00000028966	-	86	69.697	ENSSMAG00000020157	pabpn1	86	81.553	Scophthalmus_maximus
ENSDORG00000028966	-	82	69.444	ENSSDUG00000020582	pabpn1	67	81.281	Seriola_dumerili
ENSDORG00000028966	-	86	69.697	ENSSLDG00000007118	pabpn1	86	81.553	Seriola_lalandi_dorsalis
ENSDORG00000028966	-	55	90.419	ENSSPUG00000018308	-	94	90.419	Sphenodon_punctatus
ENSDORG00000028966	-	86	69.697	ENSSPAG00000021658	pabpn1	86	81.553	Stegastes_partitus
ENSDORG00000028966	-	73	72.197	ENSSSCG00000034805	-	76	67.647	Sus_scrofa
ENSDORG00000028966	-	100	98.693	ENSSSCG00000002023	PABPN1	100	98.693	Sus_scrofa
ENSDORG00000028966	-	58	53.977	ENSSSCG00000038472	-	91	53.293	Sus_scrofa
ENSDORG00000028966	-	86	70.076	ENSTRUG00000023664	pabpn1	86	82.039	Takifugu_rubripes
ENSDORG00000028966	-	68	79.048	ENSTNIG00000005369	pabpn1	93	79.227	Tetraodon_nigroviridis
ENSDORG00000028966	-	100	98.039	ENSUAMG00000024460	PABPN1	100	98.039	Ursus_americanus
ENSDORG00000028966	-	62	98.942	ENSUMAG00000014288	BCL2L2-PABPN1	57	98.942	Ursus_maritimus
ENSDORG00000028966	-	62	98.942	ENSVVUG00000019912	BCL2L2-PABPN1	76	97.409	Vulpes_vulpes
ENSDORG00000028966	-	64	89.796	ENSXETG00000014597	pabpn1	70	89.372	Xenopus_tropicalis
ENSDORG00000028966	-	57	67.797	ENSXCOG00000005158	pabpn1	89	80.263	Xiphophorus_couchianus
ENSDORG00000028966	-	86	67.547	ENSXMAG00000006196	pabpn1	86	80.676	Xiphophorus_maculatus