EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000029054 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 804 bases
Position: chrKN672354.1:28179786-28180589
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000018111	Fcf1	PF04900.12	6.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000026668	-	198	-	ENSDORP00000024384	65 (aa)	-	UPI000BAD1F18
ENSDORT00000031569	-	780	-	ENSDORP00000018111	259 (aa)	-	UPI000BAD1A1A

Gene Model

Click here to download ENSDORG00000029054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000029054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000029054	-	55	92.308	ENSDORG00000005950	-	100	92.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000029054	-	93	81.526	ENSG00000147679	UTP23	100	81.526	Homo_sapiens
ENSDORG00000029054	-	63	52.096	ENSAPOG00000013233	UTP23	75	48.649	Acanthochromis_polyacanthus
ENSDORG00000029054	-	56	55.479	ENSAPOG00000004608	-	69	56.164	Acanthochromis_polyacanthus
ENSDORG00000029054	-	77	52.632	ENSAPOG00000004620	utp23	83	53.110	Acanthochromis_polyacanthus
ENSDORG00000029054	-	91	82.857	ENSAMEG00000010317	UTP23	99	82.857	Ailuropoda_melanoleuca
ENSDORG00000029054	-	77	55.981	ENSACIG00000013638	utp23	79	55.981	Amphilophus_citrinellus
ENSDORG00000029054	-	77	54.545	ENSAOCG00000016307	utp23	83	55.024	Amphiprion_ocellaris
ENSDORG00000029054	-	77	54.545	ENSAPEG00000018976	utp23	83	55.024	Amphiprion_percula
ENSDORG00000029054	-	79	57.009	ENSATEG00000007509	utp23	82	55.981	Anabas_testudineus
ENSDORG00000029054	-	77	59.420	ENSACAG00000011061	UTP23	100	55.159	Anolis_carolinensis
ENSDORG00000029054	-	93	80.723	ENSANAG00000025273	-	100	81.124	Aotus_nancymaae
ENSDORG00000029054	-	95	78.824	ENSANAG00000036252	-	99	79.216	Aotus_nancymaae
ENSDORG00000029054	-	77	51.196	ENSAMXG00000020989	utp23	82	51.196	Astyanax_mexicanus
ENSDORG00000029054	-	92	79.839	ENSBTAG00000040422	UTP23	100	79.839	Bos_taurus
ENSDORG00000029054	-	78	36.279	WBGene00016411	C34E10.10	84	36.190	Caenorhabditis_elegans
ENSDORG00000029054	-	93	80.723	ENSCJAG00000005903	UTP23	100	81.124	Callithrix_jacchus
ENSDORG00000029054	-	92	82.186	ENSCAFG00000000821	UTP23	100	82.186	Canis_familiaris
ENSDORG00000029054	-	92	82.186	ENSCAFG00020004174	UTP23	100	82.186	Canis_lupus_dingo
ENSDORG00000029054	-	92	80.242	ENSCHIG00000019828	UTP23	100	80.242	Capra_hircus
ENSDORG00000029054	-	92	79.839	ENSTSYG00000001644	UTP23	100	79.839	Carlito_syrichta
ENSDORG00000029054	-	83	76.682	ENSCPOG00000034561	UTP23	87	77.021	Cavia_porcellus
ENSDORG00000029054	-	93	81.928	ENSCCAG00000030228	UTP23	100	82.329	Cebus_capucinus
ENSDORG00000029054	-	93	80.723	ENSCATG00000035129	UTP23	100	80.723	Cercocebus_atys
ENSDORG00000029054	-	83	81.614	ENSCLAG00000005108	-	99	79.352	Chinchilla_lanigera
ENSDORG00000029054	-	84	74.009	ENSCLAG00000000531	-	100	74.009	Chinchilla_lanigera
ENSDORG00000029054	-	93	80.723	ENSCSAG00000010933	UTP23	100	80.723	Chlorocebus_sabaeus
ENSDORG00000029054	-	92	82.186	ENSCHOG00000003145	UTP23	99	82.186	Choloepus_hoffmanni
ENSDORG00000029054	-	82	64.091	ENSCPBG00000001634	UTP23	97	62.656	Chrysemys_picta_bellii
ENSDORG00000029054	-	76	40.476	ENSCING00000012577	-	94	40.476	Ciona_intestinalis
ENSDORG00000029054	-	76	39.904	ENSCSAVG00000003273	-	95	39.904	Ciona_savignyi
ENSDORG00000029054	-	95	78.906	ENSCANG00000028461	UTP23	96	78.906	Colobus_angolensis_palliatus
ENSDORG00000029054	-	92	76.210	ENSCGRG00001005218	Utp23	100	76.210	Cricetulus_griseus_chok1gshd
ENSDORG00000029054	-	79	56.542	ENSCSEG00000011409	utp23	93	53.556	Cynoglossus_semilaevis
ENSDORG00000029054	-	79	54.206	ENSCVAG00000003180	utp23	81	53.110	Cyprinodon_variegatus
ENSDORG00000029054	-	81	52.273	ENSDARG00000105012	utp23	90	53.247	Danio_rerio
ENSDORG00000029054	-	90	82.305	ENSDNOG00000033602	UTP23	97	82.305	Dasypus_novemcinctus
ENSDORG00000029054	-	76	35.407	FBgn0031361	CG17652	83	35.407	Drosophila_melanogaster
ENSDORG00000029054	-	93	51.793	ENSETEG00000017109	-	100	51.200	Echinops_telfairi
ENSDORG00000029054	-	93	74.699	ENSETEG00000015401	-	100	73.494	Echinops_telfairi
ENSDORG00000029054	-	79	44.393	ENSEBUG00000009876	utp23	90	43.062	Eptatretus_burgeri
ENSDORG00000029054	-	92	78.947	ENSEASG00005023141	UTP23	100	78.947	Equus_asinus_asinus
ENSDORG00000029054	-	92	79.757	ENSECAG00000026844	UTP23	100	79.757	Equus_caballus
ENSDORG00000029054	-	93	77.912	ENSEEUG00000004503	UTP23	100	77.912	Erinaceus_europaeus
ENSDORG00000029054	-	77	54.327	ENSELUG00000005602	utp23	83	54.808	Esox_lucius
ENSDORG00000029054	-	92	82.186	ENSFCAG00000036051	UTP23	100	82.186	Felis_catus
ENSDORG00000029054	-	76	60.976	ENSFALG00000002299	UTP23	99	56.680	Ficedula_albicollis
ENSDORG00000029054	-	92	80.000	ENSFDAG00000021034	UTP23	100	80.800	Fukomys_damarensis
ENSDORG00000029054	-	79	56.604	ENSFHEG00000008581	utp23	82	55.556	Fundulus_heteroclitus
ENSDORG00000029054	-	79	50.943	ENSGMOG00000015495	utp23	87	50.242	Gadus_morhua
ENSDORG00000029054	-	82	60.000	ENSGALG00000032400	UTP23	93	59.565	Gallus_gallus
ENSDORG00000029054	-	77	54.545	ENSGAFG00000002063	utp23	80	54.545	Gambusia_affinis
ENSDORG00000029054	-	76	52.657	ENSGACG00000002979	utp23	94	51.931	Gasterosteus_aculeatus
ENSDORG00000029054	-	97	79.151	ENSGGOG00000013203	UTP23	100	81.124	Gorilla_gorilla
ENSDORG00000029054	-	80	56.422	ENSHBUG00000023376	utp23	82	55.981	Haplochromis_burtoni
ENSDORG00000029054	-	92	79.600	ENSHGLG00000004025	UTP23	100	79.600	Heterocephalus_glaber_female
ENSDORG00000029054	-	92	76.000	ENSHGLG00000020901	-	93	76.000	Heterocephalus_glaber_female
ENSDORG00000029054	-	92	72.541	ENSHGLG00000008717	-	100	73.361	Heterocephalus_glaber_female
ENSDORG00000029054	-	75	78.283	ENSHGLG00100012817	-	100	70.248	Heterocephalus_glaber_male
ENSDORG00000029054	-	92	79.600	ENSHGLG00100018875	UTP23	100	79.600	Heterocephalus_glaber_male
ENSDORG00000029054	-	70	53.968	ENSHCOG00000007006	utp23	84	54.327	Hippocampus_comes
ENSDORG00000029054	-	81	53.394	ENSIPUG00000014437	utp23	91	52.381	Ictalurus_punctatus
ENSDORG00000029054	-	92	82.661	ENSSTOG00000001411	UTP23	100	82.661	Ictidomys_tridecemlineatus
ENSDORG00000029054	-	79	54.206	ENSKMAG00000002262	utp23	91	51.695	Kryptolebias_marmoratus
ENSDORG00000029054	-	77	51.429	ENSLBEG00000012819	utp23	81	51.905	Labrus_bergylta
ENSDORG00000029054	-	84	60.444	ENSLACG00000014611	UTP23	91	60.088	Latimeria_chalumnae
ENSDORG00000029054	-	85	56.388	ENSLOCG00000003289	utp23	90	56.388	Lepisosteus_oculatus
ENSDORG00000029054	-	92	81.124	ENSLAFG00000001282	UTP23	100	81.124	Loxodonta_africana
ENSDORG00000029054	-	93	81.124	ENSMFAG00000003374	UTP23	100	81.124	Macaca_fascicularis
ENSDORG00000029054	-	93	80.723	ENSMMUG00000020284	UTP23	100	80.723	Macaca_mulatta
ENSDORG00000029054	-	93	81.124	ENSMNEG00000028668	UTP23	100	81.124	Macaca_nemestrina
ENSDORG00000029054	-	97	78.764	ENSMLEG00000032668	UTP23	97	78.764	Mandrillus_leucophaeus
ENSDORG00000029054	-	85	54.310	ENSMAMG00000003259	utp23	83	55.024	Mastacembelus_armatus
ENSDORG00000029054	-	80	56.422	ENSMZEG00005026398	utp23	82	55.981	Maylandia_zebra
ENSDORG00000029054	-	82	60.455	ENSMGAG00000012472	UTP23	99	58.607	Meleagris_gallopavo
ENSDORG00000029054	-	54	74.286	ENSMAUG00000017455	Utp23	99	74.286	Mesocricetus_auratus
ENSDORG00000029054	-	92	83.401	ENSMICG00000034720	UTP23	100	83.401	Microcebus_murinus
ENSDORG00000029054	-	76	54.854	ENSMMOG00000014498	utp23	84	54.545	Mola_mola
ENSDORG00000029054	-	93	69.048	ENSMODG00000004140	UTP23	100	70.635	Monodelphis_domestica
ENSDORG00000029054	-	80	56.881	ENSMALG00000010867	utp23	85	56.459	Monopterus_albus
ENSDORG00000029054	-	92	75.403	MGP_CAROLIEiJ_G0019781	Utp23	100	76.210	Mus_caroli
ENSDORG00000029054	-	92	77.108	ENSMUSG00000022313	Utp23	100	77.108	Mus_musculus
ENSDORG00000029054	-	92	77.108	MGP_SPRETEiJ_G0020678	Utp23	97	77.108	Mus_spretus
ENSDORG00000029054	-	91	81.633	ENSMPUG00000000987	UTP23	99	81.633	Mustela_putorius_furo
ENSDORG00000029054	-	92	79.839	ENSMLUG00000004345	UTP23	100	79.839	Myotis_lucifugus
ENSDORG00000029054	-	80	56.881	ENSNBRG00000012946	utp23	82	56.459	Neolamprologus_brichardi
ENSDORG00000029054	-	97	78.378	ENSNLEG00000032995	UTP23	96	78.378	Nomascus_leucogenys
ENSDORG00000029054	-	83	72.197	ENSMEUG00000001566	UTP23	100	71.795	Notamacropus_eugenii
ENSDORG00000029054	-	92	75.806	ENSOPRG00000011227	UTP23	99	75.806	Ochotona_princeps
ENSDORG00000029054	-	92	76.000	ENSODEG00000018881	-	100	76.400	Octodon_degus
ENSDORG00000029054	-	62	58.235	ENSONIG00000013525	utp23	80	57.764	Oreochromis_niloticus
ENSDORG00000029054	-	88	56.067	ENSOANG00000004878	UTP23	100	56.067	Ornithorhynchus_anatinus
ENSDORG00000029054	-	93	79.920	ENSOCUG00000007541	UTP23	100	79.920	Oryctolagus_cuniculus
ENSDORG00000029054	-	77	54.067	ENSORLG00000001784	utp23	82	54.067	Oryzias_latipes
ENSDORG00000029054	-	77	52.632	ENSORLG00020009731	utp23	82	54.067	Oryzias_latipes_hni
ENSDORG00000029054	-	77	53.110	ENSORLG00015016970	utp23	82	54.545	Oryzias_latipes_hsok
ENSDORG00000029054	-	80	52.752	ENSOMEG00000008767	utp23	82	53.589	Oryzias_melastigma
ENSDORG00000029054	-	54	76.596	ENSOGAG00000033060	-	100	76.596	Otolemur_garnettii
ENSDORG00000029054	-	92	80.162	ENSOGAG00000017024	UTP23	100	80.162	Otolemur_garnettii
ENSDORG00000029054	-	92	80.242	ENSOARG00000010483	UTP23	100	80.242	Ovis_aries
ENSDORG00000029054	-	93	81.124	ENSPPAG00000028660	UTP23	100	81.124	Pan_paniscus
ENSDORG00000029054	-	92	82.186	ENSPPRG00000024902	UTP23	100	82.186	Panthera_pardus
ENSDORG00000029054	-	92	82.186	ENSPTIG00000019925	UTP23	100	82.186	Panthera_tigris_altaica
ENSDORG00000029054	-	97	79.151	ENSPTRG00000020521	UTP23	96	79.151	Pan_troglodytes
ENSDORG00000029054	-	93	80.723	ENSPANG00000011559	UTP23	100	80.723	Papio_anubis
ENSDORG00000029054	-	88	54.583	ENSPKIG00000018790	utp23	99	53.782	Paramormyrops_kingsleyae
ENSDORG00000029054	-	82	63.348	ENSPSIG00000013132	UTP23	100	60.081	Pelodiscus_sinensis
ENSDORG00000029054	-	79	52.632	ENSPMGG00000019770	utp23	83	51.724	Periophthalmus_magnuspinnatus
ENSDORG00000029054	-	93	66.667	ENSPCIG00000018598	UTP23	98	68.254	Phascolarctos_cinereus
ENSDORG00000029054	-	80	55.046	ENSPFOG00000003590	utp23	82	54.545	Poecilia_formosa
ENSDORG00000029054	-	80	55.046	ENSPLAG00000017925	utp23	82	54.545	Poecilia_latipinna
ENSDORG00000029054	-	80	55.046	ENSPMEG00000006728	utp23	82	54.545	Poecilia_mexicana
ENSDORG00000029054	-	77	54.545	ENSPREG00000002478	utp23	82	54.545	Poecilia_reticulata
ENSDORG00000029054	-	93	81.124	ENSPPYG00000018831	UTP23	100	81.124	Pongo_abelii
ENSDORG00000029054	-	92	78.629	ENSPCAG00000009093	UTP23	99	78.629	Procavia_capensis
ENSDORG00000029054	-	54	85.816	ENSPCOG00000015084	-	100	85.816	Propithecus_coquereli
ENSDORG00000029054	-	92	82.186	ENSPVAG00000002661	UTP23	99	82.186	Pteropus_vampyrus
ENSDORG00000029054	-	80	55.963	ENSPNYG00000017636	utp23	82	55.502	Pundamilia_nyererei
ENSDORG00000029054	-	78	52.830	ENSPNAG00000024538	utp23	100	51.653	Pygocentrus_nattereri
ENSDORG00000029054	-	92	74.800	ENSRNOG00000004387	Utp23	100	76.000	Rattus_norvegicus
ENSDORG00000029054	-	93	81.526	ENSRBIG00000026267	UTP23	100	81.526	Rhinopithecus_bieti
ENSDORG00000029054	-	93	81.526	ENSRROG00000028593	UTP23	100	81.526	Rhinopithecus_roxellana
ENSDORG00000029054	-	93	80.723	ENSSBOG00000018914	UTP23	100	81.124	Saimiri_boliviensis_boliviensis
ENSDORG00000029054	-	59	75.974	ENSSHAG00000015399	UTP23	91	70.225	Sarcophilus_harrisii
ENSDORG00000029054	-	79	55.140	ENSSFOG00015009226	utp23	91	54.067	Scleropages_formosus
ENSDORG00000029054	-	85	55.128	ENSSMAG00000020390	utp23	91	56.410	Scophthalmus_maximus
ENSDORG00000029054	-	85	55.172	ENSSDUG00000020272	utp23	87	55.981	Seriola_dumerili
ENSDORG00000029054	-	88	53.750	ENSSLDG00000000393	utp23	87	55.981	Seriola_lalandi_dorsalis
ENSDORG00000029054	-	79	63.679	ENSSPUG00000011572	UTP23	93	62.445	Sphenodon_punctatus
ENSDORG00000029054	-	77	53.589	ENSSPAG00000013890	utp23	84	54.067	Stegastes_partitus
ENSDORG00000029054	-	92	78.088	ENSSSCG00000030493	UTP23	100	78.088	Sus_scrofa
ENSDORG00000029054	-	75	58.621	ENSTGUG00000015403	-	98	56.957	Taeniopygia_guttata
ENSDORG00000029054	-	76	59.512	ENSTGUG00000012316	-	99	55.466	Taeniopygia_guttata
ENSDORG00000029054	-	79	52.336	ENSTRUG00000023365	utp23	82	52.153	Takifugu_rubripes
ENSDORG00000029054	-	93	77.510	ENSTBEG00000008655	UTP23	100	77.510	Tupaia_belangeri
ENSDORG00000029054	-	92	80.242	ENSTTRG00000015295	UTP23	100	81.048	Tursiops_truncatus
ENSDORG00000029054	-	91	82.041	ENSUMAG00000020439	UTP23	99	82.449	Ursus_maritimus
ENSDORG00000029054	-	92	81.048	ENSVPAG00000009358	UTP23	100	81.048	Vicugna_pacos
ENSDORG00000029054	-	92	82.186	ENSVVUG00000015307	UTP23	100	82.186	Vulpes_vulpes
ENSDORG00000029054	-	77	61.353	ENSXETG00000020781	utp23	95	59.227	Xenopus_tropicalis
ENSDORG00000029054	-	77	54.545	ENSXCOG00000019504	utp23	82	54.545	Xiphophorus_couchianus
ENSDORG00000029054	-	77	54.545	ENSXMAG00000014058	utp23	82	54.545	Xiphophorus_maculatus