EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000029155 (Gene tree)
Gene ID: 105993937
Gene Symbol: Polr1d
Alias: -
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 49905 bases
Position: chrKN672448.1:1418600-1468504
Accession: 105993937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000016123	RNA_pol_L_2	PF13656.6	1.5e-28	1	1
ENSDORP00000016123	RNA_pol_L	PF01193.24	3.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000031184	-	789	XM_013027327	ENSDORP00000016123	133 (aa)	XP_012882781	A0A1S3G1U8
ENSDORT00000028161	-	102	-	ENSDORP00000023301	33 (aa)	-	UPI00001A92E3

Gene Model

Click here to download ENSDORG00000029155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000029155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000029155	Polr1d	77	33.010	ENSDORG00000005934	Polr2j	85	33.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000029155	Polr1d	100	95.489	ENSG00000186184	POLR1D	100	95.690	Homo_sapiens
ENSDORG00000029155	Polr1d	83	67.568	ENSAPOG00000021882	polr1d	98	67.568	Acanthochromis_polyacanthus
ENSDORG00000029155	Polr1d	94	95.200	ENSAMEG00000019095	POLR1D	100	95.200	Ailuropoda_melanoleuca
ENSDORG00000029155	Polr1d	75	74.000	ENSACIG00000013328	polr1d	87	74.000	Amphilophus_citrinellus
ENSDORG00000029155	Polr1d	84	67.857	ENSAOCG00000018500	polr1d	98	67.857	Amphiprion_ocellaris
ENSDORG00000029155	Polr1d	78	71.154	ENSAPEG00000009489	polr1d	91	71.154	Amphiprion_percula
ENSDORG00000029155	Polr1d	80	66.355	ENSATEG00000019322	polr1d	94	66.355	Anabas_testudineus
ENSDORG00000029155	Polr1d	83	67.568	ENSACAG00000015753	POLR1D	96	67.568	Anolis_carolinensis
ENSDORG00000029155	Polr1d	100	95.489	ENSANAG00000024486	POLR1D	100	95.489	Aotus_nancymaae
ENSDORG00000029155	Polr1d	77	73.529	ENSACLG00000023805	polr1d	94	70.093	Astatotilapia_calliptera
ENSDORG00000029155	Polr1d	80	69.811	ENSAMXG00000036118	polr1d	92	69.811	Astyanax_mexicanus
ENSDORG00000029155	Polr1d	100	93.233	ENSBTAG00000008642	POLR1D	100	93.233	Bos_taurus
ENSDORG00000029155	Polr1d	100	93.233	ENSBTAG00000033252	-	100	93.233	Bos_taurus
ENSDORG00000029155	Polr1d	62	39.024	WBGene00010230	rpac-19	57	39.024	Caenorhabditis_elegans
ENSDORG00000029155	Polr1d	100	95.489	ENSCJAG00000044669	POLR1D	100	95.489	Callithrix_jacchus
ENSDORG00000029155	Polr1d	100	95.489	ENSCAFG00000006755	POLR1D	100	95.489	Canis_familiaris
ENSDORG00000029155	Polr1d	100	93.985	ENSCHIG00000021910	POLR1D	100	93.985	Capra_hircus
ENSDORG00000029155	Polr1d	96	80.769	ENSTSYG00000034852	-	98	80.672	Carlito_syrichta
ENSDORG00000029155	Polr1d	93	92.742	ENSTSYG00000026817	-	93	92.742	Carlito_syrichta
ENSDORG00000029155	Polr1d	96	52.344	ENSCAPG00000006058	-	99	52.344	Cavia_aperea
ENSDORG00000029155	Polr1d	96	53.125	ENSCPOG00000030450	-	99	53.125	Cavia_porcellus
ENSDORG00000029155	Polr1d	100	93.985	ENSCCAG00000021349	-	100	93.985	Cebus_capucinus
ENSDORG00000029155	Polr1d	100	76.692	ENSCCAG00000020191	-	100	76.692	Cebus_capucinus
ENSDORG00000029155	Polr1d	100	83.459	ENSCATG00000022900	-	100	83.459	Cercocebus_atys
ENSDORG00000029155	Polr1d	100	93.985	ENSCATG00000030710	-	100	93.985	Cercocebus_atys
ENSDORG00000029155	Polr1d	93	94.355	ENSCLAG00000017623	POLR1D	100	94.355	Chinchilla_lanigera
ENSDORG00000029155	Polr1d	73	76.289	ENSCPBG00000004719	POLR1D	96	76.289	Chrysemys_picta_bellii
ENSDORG00000029155	Polr1d	100	91.729	ENSCANG00000037694	-	100	91.729	Colobus_angolensis_palliatus
ENSDORG00000029155	Polr1d	100	93.985	ENSCANG00000028632	-	100	93.985	Colobus_angolensis_palliatus
ENSDORG00000029155	Polr1d	100	95.489	ENSCGRG00001021251	Polr1d	100	95.489	Cricetulus_griseus_chok1gshd
ENSDORG00000029155	Polr1d	100	95.489	ENSCGRG00000011639	Polr1d	100	95.489	Cricetulus_griseus_crigri
ENSDORG00000029155	Polr1d	78	69.231	ENSCSEG00000018268	polr1d	91	68.224	Cynoglossus_semilaevis
ENSDORG00000029155	Polr1d	79	71.429	ENSCVAG00000018527	polr1d	92	71.429	Cyprinodon_variegatus
ENSDORG00000029155	Polr1d	83	66.364	ENSDARG00000037570	polr1d	98	66.364	Danio_rerio
ENSDORG00000029155	Polr1d	100	90.299	ENSDNOG00000046247	-	100	90.299	Dasypus_novemcinctus
ENSDORG00000029155	Polr1d	100	92.481	ENSDNOG00000043676	-	100	92.481	Dasypus_novemcinctus
ENSDORG00000029155	Polr1d	65	41.860	FBgn0086447	l(2)37Cg	81	41.860	Drosophila_melanogaster
ENSDORG00000029155	Polr1d	93	91.129	ENSETEG00000012797	POLR1D	100	91.129	Echinops_telfairi
ENSDORG00000029155	Polr1d	65	70.115	ENSEBUG00000011748	polr1d	61	70.115	Eptatretus_burgeri
ENSDORG00000029155	Polr1d	96	93.750	ENSEASG00005022487	POLR1D	99	93.750	Equus_asinus_asinus
ENSDORG00000029155	Polr1d	93	93.548	ENSEEUG00000013144	POLR1D	100	93.548	Erinaceus_europaeus
ENSDORG00000029155	Polr1d	80	67.925	ENSELUG00000005105	rpac2	93	67.925	Esox_lucius
ENSDORG00000029155	Polr1d	100	93.985	ENSFCAG00000030162	POLR1D	100	93.985	Felis_catus
ENSDORG00000029155	Polr1d	72	77.083	ENSFALG00000011463	POLR1D	95	77.083	Ficedula_albicollis
ENSDORG00000029155	Polr1d	100	93.233	ENSFDAG00000004463	POLR1D	100	93.233	Fukomys_damarensis
ENSDORG00000029155	Polr1d	80	74.766	ENSFHEG00000015410	polr1d	93	74.766	Fundulus_heteroclitus
ENSDORG00000029155	Polr1d	78	73.077	ENSGAFG00000001693	polr1d	91	73.077	Gambusia_affinis
ENSDORG00000029155	Polr1d	88	68.644	ENSGACG00000018585	polr1d	100	68.644	Gasterosteus_aculeatus
ENSDORG00000029155	Polr1d	82	75.229	ENSGAGG00000008503	POLR1D	96	75.229	Gopherus_agassizii
ENSDORG00000029155	Polr1d	100	95.489	ENSGGOG00000004235	POLR1D	100	95.489	Gorilla_gorilla
ENSDORG00000029155	Polr1d	80	70.093	ENSHBUG00000002111	polr1d	94	70.093	Haplochromis_burtoni
ENSDORG00000029155	Polr1d	100	93.233	ENSHGLG00000003202	POLR1D	100	93.233	Heterocephalus_glaber_female
ENSDORG00000029155	Polr1d	100	93.233	ENSHGLG00100009393	POLR1D	100	93.233	Heterocephalus_glaber_male
ENSDORG00000029155	Polr1d	80	69.159	ENSHCOG00000003258	polr1d	94	69.159	Hippocampus_comes
ENSDORG00000029155	Polr1d	82	72.477	ENSIPUG00000014810	polr1d	95	72.477	Ictalurus_punctatus
ENSDORG00000029155	Polr1d	100	96.241	ENSSTOG00000013877	POLR1D	100	96.241	Ictidomys_tridecemlineatus
ENSDORG00000029155	Polr1d	95	73.810	ENSJJAG00000021667	-	75	73.810	Jaculus_jaculus
ENSDORG00000029155	Polr1d	97	88.722	ENSJJAG00000022671	-	100	92.500	Jaculus_jaculus
ENSDORG00000029155	Polr1d	80	67.925	ENSKMAG00000015256	polr1d	93	67.925	Kryptolebias_marmoratus
ENSDORG00000029155	Polr1d	79	70.476	ENSLBEG00000015919	polr1d	92	70.476	Labrus_bergylta
ENSDORG00000029155	Polr1d	86	65.217	ENSLACG00000006810	POLR1D	95	65.217	Latimeria_chalumnae
ENSDORG00000029155	Polr1d	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSDORG00000029155	Polr1d	100	87.970	ENSLAFG00000032290	POLR1D	100	87.970	Loxodonta_africana
ENSDORG00000029155	Polr1d	94	93.600	ENSMFAG00000045264	POLR1D	97	93.600	Macaca_fascicularis
ENSDORG00000029155	Polr1d	100	75.940	ENSMMUG00000041570	-	100	75.940	Macaca_mulatta
ENSDORG00000029155	Polr1d	87	94.828	ENSMMUG00000020386	POLR1D	100	94.828	Macaca_mulatta
ENSDORG00000029155	Polr1d	100	94.737	ENSMNEG00000008630	-	100	94.737	Macaca_nemestrina
ENSDORG00000029155	Polr1d	100	78.195	ENSMNEG00000038120	-	100	78.195	Macaca_nemestrina
ENSDORG00000029155	Polr1d	100	94.737	ENSMLEG00000041048	-	100	94.737	Mandrillus_leucophaeus
ENSDORG00000029155	Polr1d	100	84.211	ENSMLEG00000032251	-	100	84.211	Mandrillus_leucophaeus
ENSDORG00000029155	Polr1d	76	70.297	ENSMAMG00000014834	polr1d	94	70.297	Mastacembelus_armatus
ENSDORG00000029155	Polr1d	77	73.529	ENSMZEG00005006638	polr1d	90	73.529	Maylandia_zebra
ENSDORG00000029155	Polr1d	69	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSDORG00000029155	Polr1d	100	95.489	ENSMAUG00000001946	Polr1d	100	95.489	Mesocricetus_auratus
ENSDORG00000029155	Polr1d	100	93.985	ENSMICG00000016883	-	100	93.985	Microcebus_murinus
ENSDORG00000029155	Polr1d	99	78.788	ENSMICG00000007349	-	100	78.788	Microcebus_murinus
ENSDORG00000029155	Polr1d	99	93.182	ENSMOCG00000021288	Polr1d	99	93.182	Microtus_ochrogaster
ENSDORG00000029155	Polr1d	80	69.159	ENSMMOG00000009605	polr1d	94	69.159	Mola_mola
ENSDORG00000029155	Polr1d	80	83.019	ENSMODG00000023881	POLR1D	93	83.019	Monodelphis_domestica
ENSDORG00000029155	Polr1d	80	66.355	ENSMALG00000010652	polr1d	94	66.355	Monopterus_albus
ENSDORG00000029155	Polr1d	100	90.977	MGP_CAROLIEiJ_G0028034	Polr1d	100	90.977	Mus_caroli
ENSDORG00000029155	Polr1d	100	90.977	ENSMUSG00000029642	Polr1d	100	90.977	Mus_musculus
ENSDORG00000029155	Polr1d	100	90.226	MGP_PahariEiJ_G0024600	Polr1d	100	90.226	Mus_pahari
ENSDORG00000029155	Polr1d	100	90.226	MGP_SPRETEiJ_G0029032	Polr1d	100	90.226	Mus_spretus
ENSDORG00000029155	Polr1d	99	84.091	ENSMLUG00000004118	-	99	84.091	Myotis_lucifugus
ENSDORG00000029155	Polr1d	100	94.737	ENSMLUG00000027169	-	100	94.737	Myotis_lucifugus
ENSDORG00000029155	Polr1d	87	95.690	ENSNGAG00000006014	Polr1d	100	95.690	Nannospalax_galili
ENSDORG00000029155	Polr1d	80	70.093	ENSNBRG00000020327	polr1d	94	70.093	Neolamprologus_brichardi
ENSDORG00000029155	Polr1d	100	95.489	ENSNLEG00000000358	POLR1D	100	95.489	Nomascus_leucogenys
ENSDORG00000029155	Polr1d	100	79.699	ENSODEG00000014801	-	100	79.699	Octodon_degus
ENSDORG00000029155	Polr1d	100	93.233	ENSODEG00000005294	-	100	93.233	Octodon_degus
ENSDORG00000029155	Polr1d	79	81.905	ENSOANG00000008708	-	97	81.905	Ornithorhynchus_anatinus
ENSDORG00000029155	Polr1d	100	94.737	ENSOCUG00000015706	POLR1D	82	94.737	Oryctolagus_cuniculus
ENSDORG00000029155	Polr1d	78	71.154	ENSORLG00000010257	polr1d	91	71.154	Oryzias_latipes
ENSDORG00000029155	Polr1d	82	68.807	ENSORLG00020000533	polr1d	74	68.807	Oryzias_latipes_hni
ENSDORG00000029155	Polr1d	83	69.369	ENSORLG00015013267	polr1d	74	69.369	Oryzias_latipes_hsok
ENSDORG00000029155	Polr1d	91	65.289	ENSOMEG00000014912	polr1d	81	65.289	Oryzias_melastigma
ENSDORG00000029155	Polr1d	100	95.489	ENSOGAG00000014601	POLR1D	100	95.489	Otolemur_garnettii
ENSDORG00000029155	Polr1d	94	93.600	ENSOARG00000017005	POLR1D	96	93.600	Ovis_aries
ENSDORG00000029155	Polr1d	100	93.985	ENSPPAG00000028138	POLR1D	100	93.985	Pan_paniscus
ENSDORG00000029155	Polr1d	99	93.939	ENSPPRG00000003381	POLR1D	99	93.939	Panthera_pardus
ENSDORG00000029155	Polr1d	93	93.548	ENSPTIG00000018137	POLR1D	93	93.548	Panthera_tigris_altaica
ENSDORG00000029155	Polr1d	100	95.489	ENSPTRG00000005734	POLR1D	100	95.489	Pan_troglodytes
ENSDORG00000029155	Polr1d	100	83.459	ENSPANG00000035051	-	100	83.459	Papio_anubis
ENSDORG00000029155	Polr1d	100	94.737	ENSPANG00000020259	-	100	94.737	Papio_anubis
ENSDORG00000029155	Polr1d	86	63.478	ENSPKIG00000021891	polr1d	90	53.982	Paramormyrops_kingsleyae
ENSDORG00000029155	Polr1d	87	73.504	ENSPSIG00000011822	POLR1D	91	73.504	Pelodiscus_sinensis
ENSDORG00000029155	Polr1d	84	66.071	ENSPMGG00000010359	polr1d	97	66.071	Periophthalmus_magnuspinnatus
ENSDORG00000029155	Polr1d	93	56.800	ENSPMGG00000012998	POLR1D	93	56.800	Periophthalmus_magnuspinnatus
ENSDORG00000029155	Polr1d	100	90.226	ENSPEMG00000006336	-	100	90.226	Peromyscus_maniculatus_bairdii
ENSDORG00000029155	Polr1d	82	57.798	ENSPMAG00000004228	polr1d	92	57.798	Petromyzon_marinus
ENSDORG00000029155	Polr1d	80	83.019	ENSPCIG00000001673	POLR1D	93	83.019	Phascolarctos_cinereus
ENSDORG00000029155	Polr1d	78	73.077	ENSPFOG00000023343	polr1d	91	74.684	Poecilia_formosa
ENSDORG00000029155	Polr1d	78	73.077	ENSPLAG00000009675	polr1d	91	73.077	Poecilia_latipinna
ENSDORG00000029155	Polr1d	78	73.077	ENSPMEG00000004628	polr1d	91	73.077	Poecilia_mexicana
ENSDORG00000029155	Polr1d	78	73.077	ENSPREG00000022032	polr1d	91	73.077	Poecilia_reticulata
ENSDORG00000029155	Polr1d	100	93.985	ENSPCOG00000028175	POLR1D	100	93.985	Propithecus_coquereli
ENSDORG00000029155	Polr1d	80	70.093	ENSPNYG00000000107	polr1d	94	70.093	Pundamilia_nyererei
ENSDORG00000029155	Polr1d	76	69.307	ENSPNAG00000001512	polr1d	87	68.269	Pygocentrus_nattereri
ENSDORG00000029155	Polr1d	100	94.737	ENSRBIG00000036378	-	100	94.737	Rhinopithecus_bieti
ENSDORG00000029155	Polr1d	100	90.977	ENSRBIG00000000336	-	100	90.977	Rhinopithecus_bieti
ENSDORG00000029155	Polr1d	100	94.737	ENSRROG00000042232	-	100	94.737	Rhinopithecus_roxellana
ENSDORG00000029155	Polr1d	100	91.729	ENSRROG00000026751	-	100	91.729	Rhinopithecus_roxellana
ENSDORG00000029155	Polr1d	89	47.059	YNL113W	RPC19	84	47.059	Saccharomyces_cerevisiae
ENSDORG00000029155	Polr1d	100	95.489	ENSSBOG00000028482	-	100	95.489	Saimiri_boliviensis_boliviensis
ENSDORG00000029155	Polr1d	86	90.351	ENSSBOG00000030146	-	84	90.351	Saimiri_boliviensis_boliviensis
ENSDORG00000029155	Polr1d	86	76.316	ENSSHAG00000001190	POLR1D	88	76.316	Sarcophilus_harrisii
ENSDORG00000029155	Polr1d	83	71.171	ENSSFOG00015011375	polr1d	97	71.171	Scleropages_formosus
ENSDORG00000029155	Polr1d	80	67.290	ENSSMAG00000011861	polr1d	94	67.290	Scophthalmus_maximus
ENSDORG00000029155	Polr1d	80	66.355	ENSSDUG00000011930	polr1d	94	66.355	Seriola_dumerili
ENSDORG00000029155	Polr1d	86	62.609	ENSSLDG00000023871	polr1d	97	62.609	Seriola_lalandi_dorsalis
ENSDORG00000029155	Polr1d	100	93.985	ENSSARG00000007840	POLR1D	100	93.985	Sorex_araneus
ENSDORG00000029155	Polr1d	79	73.333	ENSSPUG00000005786	POLR1D	95	70.270	Sphenodon_punctatus
ENSDORG00000029155	Polr1d	78	72.115	ENSSPAG00000011764	polr1d	91	72.115	Stegastes_partitus
ENSDORG00000029155	Polr1d	100	91.729	ENSSSCG00000009310	POLR1D	100	91.729	Sus_scrofa
ENSDORG00000029155	Polr1d	72	77.083	ENSTGUG00000005450	POLR1D	100	77.083	Taeniopygia_guttata
ENSDORG00000029155	Polr1d	77	66.990	ENSTRUG00000019741	polr1d	90	66.990	Takifugu_rubripes
ENSDORG00000029155	Polr1d	93	94.355	ENSTBEG00000007006	POLR1D	100	94.355	Tupaia_belangeri
ENSDORG00000029155	Polr1d	100	95.489	ENSUAMG00000011413	POLR1D	100	95.489	Ursus_americanus
ENSDORG00000029155	Polr1d	93	95.161	ENSUMAG00000016968	POLR1D	97	95.161	Ursus_maritimus
ENSDORG00000029155	Polr1d	100	95.489	ENSVVUG00000009216	POLR1D	100	95.489	Vulpes_vulpes
ENSDORG00000029155	Polr1d	74	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSDORG00000029155	Polr1d	74	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus