EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000029558 (Gene tree)
Gene ID: 105981775
Gene Symbol: Snrpb
Alias: SM-B|SM11|SMB|SNRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 8012 bases
Position: chrKN672359.1:11225381-11233392
Accession: 105981775
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000022395	LSM	PF01423.22	5.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000034026	-	954	XM_013011097	ENSDORP00000022395	230 (aa)	XP_012866551	UPI000BAD012C

Gene Model

Click here to download ENSDORG00000029558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000029558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000029558	Snrpb	93	92.093	ENSDORG00000004527	Snrpn	90	92.093

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000029558	Snrpb	100	99.565	ENSG00000125835	SNRPB	97	99.552	Homo_sapiens
ENSDORG00000029558	Snrpb	76	92.571	ENSAPOG00000019606	snrpb	54	94.444	Acanthochromis_polyacanthus
ENSDORG00000029558	Snrpb	100	99.565	ENSAMEG00000011353	SNRPB	95	99.565	Ailuropoda_melanoleuca
ENSDORG00000029558	Snrpb	76	92.571	ENSACIG00000014480	snrpb	71	94.444	Amphilophus_citrinellus
ENSDORG00000029558	Snrpb	76	92.571	ENSAOCG00000006876	snrpb	67	94.444	Amphiprion_ocellaris
ENSDORG00000029558	Snrpb	76	92.571	ENSAPEG00000021585	snrpb	69	94.444	Amphiprion_percula
ENSDORG00000029558	Snrpb	76	92.000	ENSATEG00000009836	snrpb	67	93.827	Anabas_testudineus
ENSDORG00000029558	Snrpb	93	94.836	ENSACAG00000002053	SNRPB	92	94.836	Anolis_carolinensis
ENSDORG00000029558	Snrpb	98	92.000	ENSANAG00000036271	-	74	92.350	Aotus_nancymaae
ENSDORG00000029558	Snrpb	100	99.565	ENSANAG00000024443	-	97	99.552	Aotus_nancymaae
ENSDORG00000029558	Snrpb	76	92.571	ENSACLG00000014707	snrpb	67	94.444	Astatotilapia_calliptera
ENSDORG00000029558	Snrpb	77	93.220	ENSAMXG00000029434	snrpb	74	94.350	Astyanax_mexicanus
ENSDORG00000029558	Snrpb	97	100.000	ENSBTAG00000001038	SNRPB	97	100.000	Bos_taurus
ENSDORG00000029558	Snrpb	90	91.827	ENSCJAG00000023097	-	76	91.803	Callithrix_jacchus
ENSDORG00000029558	Snrpb	97	99.552	ENSCJAG00000020971	-	97	99.552	Callithrix_jacchus
ENSDORG00000029558	Snrpb	79	88.398	ENSCAFG00000031109	-	75	84.530	Canis_familiaris
ENSDORG00000029558	Snrpb	97	99.552	ENSCAFG00000006693	-	97	99.552	Canis_familiaris
ENSDORG00000029558	Snrpb	100	99.565	ENSCAFG00020016981	-	96	99.565	Canis_lupus_dingo
ENSDORG00000029558	Snrpb	97	100.000	ENSCHIG00000025449	-	97	100.000	Capra_hircus
ENSDORG00000029558	Snrpb	98	75.221	ENSTSYG00000032303	-	53	79.167	Carlito_syrichta
ENSDORG00000029558	Snrpb	97	99.552	ENSTSYG00000014498	-	97	99.552	Carlito_syrichta
ENSDORG00000029558	Snrpb	100	99.565	ENSCAPG00000012669	SNRPB	97	99.552	Cavia_aperea
ENSDORG00000029558	Snrpb	97	99.552	ENSCPOG00000039408	SNRPB	97	99.552	Cavia_porcellus
ENSDORG00000029558	Snrpb	53	87.705	ENSCCAG00000035140	-	81	84.783	Cebus_capucinus
ENSDORG00000029558	Snrpb	100	99.565	ENSCCAG00000026002	SNRPB	97	99.552	Cebus_capucinus
ENSDORG00000029558	Snrpb	97	99.552	ENSCATG00000030230	SNRPB	97	99.552	Cercocebus_atys
ENSDORG00000029558	Snrpb	100	98.261	ENSCLAG00000012442	SNRPB	96	98.261	Chinchilla_lanigera
ENSDORG00000029558	Snrpb	97	99.552	ENSCSAG00000010840	SNRPB	97	99.552	Chlorocebus_sabaeus
ENSDORG00000029558	Snrpb	100	96.087	ENSCPBG00000026801	SNRPB	96	96.087	Chrysemys_picta_bellii
ENSDORG00000029558	Snrpb	100	99.565	ENSCANG00000019461	SNRPB	97	99.552	Colobus_angolensis_palliatus
ENSDORG00000029558	Snrpb	97	99.552	ENSCGRG00001023046	Snrpb	97	99.552	Cricetulus_griseus_chok1gshd
ENSDORG00000029558	Snrpb	96	99.548	ENSCGRG00000010423	Snrpb	98	99.548	Cricetulus_griseus_crigri
ENSDORG00000029558	Snrpb	77	92.655	ENSCSEG00000020328	snrpb	67	94.444	Cynoglossus_semilaevis
ENSDORG00000029558	Snrpb	70	93.210	ENSDARG00000011125	snrpb	73	94.350	Danio_rerio
ENSDORG00000029558	Snrpb	100	99.565	ENSDNOG00000015545	-	96	99.565	Dasypus_novemcinctus
ENSDORG00000029558	Snrpb	93	95.349	ENSDNOG00000007896	-	88	95.349	Dasypus_novemcinctus
ENSDORG00000029558	Snrpb	62	70.629	FBgn0262601	SmB	71	70.629	Drosophila_melanogaster
ENSDORG00000029558	Snrpb	77	78.531	ENSETEG00000006830	SNRPB	78	78.531	Echinops_telfairi
ENSDORG00000029558	Snrpb	78	78.333	ENSEBUG00000007467	SNRPB	60	88.811	Eptatretus_burgeri
ENSDORG00000029558	Snrpb	97	99.103	ENSEASG00005012991	SNRPB	97	99.103	Equus_asinus_asinus
ENSDORG00000029558	Snrpb	97	99.552	ENSECAG00000011944	SNRPB	97	99.552	Equus_caballus
ENSDORG00000029558	Snrpb	98	97.788	ENSEEUG00000015568	SNRPB	80	97.788	Erinaceus_europaeus
ENSDORG00000029558	Snrpb	60	95.683	ENSELUG00000014564	snrpb	71	93.210	Esox_lucius
ENSDORG00000029558	Snrpb	97	99.552	ENSFCAG00000034090	-	97	99.552	Felis_catus
ENSDORG00000029558	Snrpb	75	95.349	ENSFALG00000004866	SNRPB	92	95.305	Ficedula_albicollis
ENSDORG00000029558	Snrpb	100	99.565	ENSFDAG00000009937	SNRPB	97	99.552	Fukomys_damarensis
ENSDORG00000029558	Snrpb	76	95.402	ENSGALG00000035421	SNRPN	90	95.349	Gallus_gallus
ENSDORG00000029558	Snrpb	72	92.771	ENSGAFG00000019558	snrpb	70	93.827	Gambusia_affinis
ENSDORG00000029558	Snrpb	77	90.960	ENSGACG00000003262	snrpb	67	94.444	Gasterosteus_aculeatus
ENSDORG00000029558	Snrpb	100	96.087	ENSGAGG00000001308	SNRPB	96	96.087	Gopherus_agassizii
ENSDORG00000029558	Snrpb	97	99.552	ENSGGOG00000016138	SNRPB	97	99.552	Gorilla_gorilla
ENSDORG00000029558	Snrpb	76	92.571	ENSHBUG00000008369	snrpb	67	94.444	Haplochromis_burtoni
ENSDORG00000029558	Snrpb	63	90.278	ENSHGLG00000016505	-	69	90.278	Heterocephalus_glaber_female
ENSDORG00000029558	Snrpb	97	99.552	ENSHGLG00000016241	-	97	99.552	Heterocephalus_glaber_female
ENSDORG00000029558	Snrpb	100	99.565	ENSHGLG00100012877	-	97	99.552	Heterocephalus_glaber_male
ENSDORG00000029558	Snrpb	63	90.278	ENSHGLG00100004178	-	69	90.278	Heterocephalus_glaber_male
ENSDORG00000029558	Snrpb	77	92.655	ENSHCOG00000014888	snrpb	67	94.444	Hippocampus_comes
ENSDORG00000029558	Snrpb	70	93.210	ENSIPUG00000024569	SNRPB	74	94.350	Ictalurus_punctatus
ENSDORG00000029558	Snrpb	93	82.326	ENSSTOG00000027821	-	61	100.000	Ictidomys_tridecemlineatus
ENSDORG00000029558	Snrpb	100	97.826	ENSSTOG00000033664	-	96	97.826	Ictidomys_tridecemlineatus
ENSDORG00000029558	Snrpb	97	99.552	ENSJJAG00000024170	Snrpb	97	99.552	Jaculus_jaculus
ENSDORG00000029558	Snrpb	72	93.976	ENSKMAG00000014494	snrpb	66	95.062	Kryptolebias_marmoratus
ENSDORG00000029558	Snrpb	77	92.655	ENSLBEG00000005678	snrpb	67	94.444	Labrus_bergylta
ENSDORG00000029558	Snrpb	93	92.558	ENSLACG00000011459	SNRPB	90	92.558	Latimeria_chalumnae
ENSDORG00000029558	Snrpb	70	93.827	ENSLOCG00000002687	snrpb	74	94.915	Lepisosteus_oculatus
ENSDORG00000029558	Snrpb	97	96.413	ENSLAFG00000017588	SNRPB	96	96.413	Loxodonta_africana
ENSDORG00000029558	Snrpb	97	99.552	ENSMFAG00000038756	SNRPB	97	99.552	Macaca_fascicularis
ENSDORG00000029558	Snrpb	97	99.552	ENSMMUG00000010050	SNRPB	97	99.552	Macaca_mulatta
ENSDORG00000029558	Snrpb	97	99.552	ENSMNEG00000027954	SNRPB	97	99.552	Macaca_nemestrina
ENSDORG00000029558	Snrpb	100	99.565	ENSMLEG00000022346	SNRPB	97	99.552	Mandrillus_leucophaeus
ENSDORG00000029558	Snrpb	76	92.571	ENSMAMG00000009294	snrpb	65	94.444	Mastacembelus_armatus
ENSDORG00000029558	Snrpb	76	92.571	ENSMZEG00005011856	snrpb	67	94.444	Maylandia_zebra
ENSDORG00000029558	Snrpb	97	100.000	ENSMICG00000016519	SNRPB	97	100.000	Microcebus_murinus
ENSDORG00000029558	Snrpb	99	83.772	ENSMICG00000015983	-	84	90.164	Microcebus_murinus
ENSDORG00000029558	Snrpb	97	99.103	ENSMOCG00000002892	-	97	99.103	Microtus_ochrogaster
ENSDORG00000029558	Snrpb	83	80.000	ENSMOCG00000021362	-	80	74.737	Microtus_ochrogaster
ENSDORG00000029558	Snrpb	77	92.090	ENSMMOG00000013226	snrpb	69	94.444	Mola_mola
ENSDORG00000029558	Snrpb	76	92.000	ENSMALG00000020839	snrpb	54	93.827	Monopterus_albus
ENSDORG00000029558	Snrpb	97	99.103	MGP_CAROLIEiJ_G0024293	Snrpb	97	99.103	Mus_caroli
ENSDORG00000029558	Snrpb	97	99.103	ENSMUSG00000027404	Snrpb	97	99.103	Mus_musculus
ENSDORG00000029558	Snrpb	97	99.103	MGP_PahariEiJ_G0025738	Snrpb	97	99.103	Mus_pahari
ENSDORG00000029558	Snrpb	97	99.103	MGP_SPRETEiJ_G0025213	Snrpb	97	99.103	Mus_spretus
ENSDORG00000029558	Snrpb	97	99.552	ENSMPUG00000009283	SNRPB	97	99.552	Mustela_putorius_furo
ENSDORG00000029558	Snrpb	100	96.957	ENSMLUG00000016951	SNRPB	96	96.957	Myotis_lucifugus
ENSDORG00000029558	Snrpb	97	99.552	ENSNGAG00000012051	Snrpb	97	99.552	Nannospalax_galili
ENSDORG00000029558	Snrpb	76	92.571	ENSNBRG00000006353	snrpb	61	94.444	Neolamprologus_brichardi
ENSDORG00000029558	Snrpb	100	99.565	ENSNLEG00000029067	SNRPB	96	99.565	Nomascus_leucogenys
ENSDORG00000029558	Snrpb	96	96.818	ENSMEUG00000015625	SNRPB	98	96.818	Notamacropus_eugenii
ENSDORG00000029558	Snrpb	97	99.552	ENSODEG00000004305	-	97	99.552	Octodon_degus
ENSDORG00000029558	Snrpb	100	94.783	ENSODEG00000016060	-	96	94.783	Octodon_degus
ENSDORG00000029558	Snrpb	76	92.571	ENSONIG00000000248	snrpb	67	94.444	Oreochromis_niloticus
ENSDORG00000029558	Snrpb	100	100.000	ENSOCUG00000014042	-	96	100.000	Oryctolagus_cuniculus
ENSDORG00000029558	Snrpb	91	71.770	ENSOCUG00000026813	-	62	70.139	Oryctolagus_cuniculus
ENSDORG00000029558	Snrpb	75	93.064	ENSOCUG00000022423	-	83	96.296	Oryctolagus_cuniculus
ENSDORG00000029558	Snrpb	91	95.215	ENSOCUG00000021456	-	76	96.175	Oryctolagus_cuniculus
ENSDORG00000029558	Snrpb	100	97.391	ENSOCUG00000028215	-	96	97.391	Oryctolagus_cuniculus
ENSDORG00000029558	Snrpb	79	92.265	ENSORLG00000021862	snrpb	67	94.444	Oryzias_latipes
ENSDORG00000029558	Snrpb	100	99.565	ENSOGAG00000016149	SNRPB	96	99.565	Otolemur_garnettii
ENSDORG00000029558	Snrpb	97	100.000	ENSOARG00000006740	SNRPB	97	100.000	Ovis_aries
ENSDORG00000029558	Snrpb	97	99.552	ENSPPAG00000036314	SNRPB	97	99.552	Pan_paniscus
ENSDORG00000029558	Snrpb	100	99.565	ENSPPRG00000003233	-	97	99.552	Panthera_pardus
ENSDORG00000029558	Snrpb	100	99.565	ENSPTIG00000007468	SNRPB	97	99.552	Panthera_tigris_altaica
ENSDORG00000029558	Snrpb	97	99.552	ENSPTRG00000013176	SNRPB	97	99.552	Pan_troglodytes
ENSDORG00000029558	Snrpb	100	99.565	ENSPANG00000020362	SNRPB	96	99.565	Papio_anubis
ENSDORG00000029558	Snrpb	70	92.593	ENSPKIG00000002865	snrpb	74	93.220	Paramormyrops_kingsleyae
ENSDORG00000029558	Snrpb	100	96.087	ENSPSIG00000014125	SNRPB	95	96.087	Pelodiscus_sinensis
ENSDORG00000029558	Snrpb	77	90.395	ENSPMGG00000016349	snrpb	69	91.975	Periophthalmus_magnuspinnatus
ENSDORG00000029558	Snrpb	97	99.552	ENSPEMG00000007948	Snrpb	97	99.552	Peromyscus_maniculatus_bairdii
ENSDORG00000029558	Snrpb	100	97.391	ENSPCIG00000004694	SNRPB	95	97.391	Phascolarctos_cinereus
ENSDORG00000029558	Snrpb	97	99.552	ENSPPYG00000010841	SNRPB	97	99.552	Pongo_abelii
ENSDORG00000029558	Snrpb	97	99.552	ENSPCOG00000013686	SNRPB	97	99.552	Propithecus_coquereli
ENSDORG00000029558	Snrpb	96	98.190	ENSPVAG00000017013	SNRPB	77	98.190	Pteropus_vampyrus
ENSDORG00000029558	Snrpb	76	92.571	ENSPNYG00000014788	snrpb	67	94.444	Pundamilia_nyererei
ENSDORG00000029558	Snrpb	77	93.785	ENSPNAG00000016126	snrpb	74	94.915	Pygocentrus_nattereri
ENSDORG00000029558	Snrpb	97	99.552	ENSRNOG00000006961	Snrpb	97	99.552	Rattus_norvegicus
ENSDORG00000029558	Snrpb	100	99.130	ENSRBIG00000040505	SNRPB	97	99.103	Rhinopithecus_bieti
ENSDORG00000029558	Snrpb	100	99.565	ENSRROG00000036094	SNRPB	97	99.552	Rhinopithecus_roxellana
ENSDORG00000029558	Snrpb	100	99.565	ENSSBOG00000027310	SNRPB	97	99.552	Saimiri_boliviensis_boliviensis
ENSDORG00000029558	Snrpb	100	97.826	ENSSHAG00000010394	SNRPB	96	97.826	Sarcophilus_harrisii
ENSDORG00000029558	Snrpb	70	91.975	ENSSFOG00015002870	snrpb	74	93.220	Scleropages_formosus
ENSDORG00000029558	Snrpb	77	92.090	ENSSMAG00000006766	snrpb	67	93.827	Scophthalmus_maximus
ENSDORG00000029558	Snrpb	76	92.571	ENSSDUG00000018539	snrpb	67	94.444	Seriola_dumerili
ENSDORG00000029558	Snrpb	76	92.571	ENSSLDG00000022391	snrpb	67	94.444	Seriola_lalandi_dorsalis
ENSDORG00000029558	Snrpb	93	87.442	ENSSARG00000003084	SNRPB	92	87.442	Sorex_araneus
ENSDORG00000029558	Snrpb	100	96.087	ENSSPUG00000015659	SNRPB	96	96.087	Sphenodon_punctatus
ENSDORG00000029558	Snrpb	76	92.571	ENSSPAG00000021992	snrpb	67	94.444	Stegastes_partitus
ENSDORG00000029558	Snrpb	97	100.000	ENSSSCG00000040857	-	97	100.000	Sus_scrofa
ENSDORG00000029558	Snrpb	97	80.269	ENSSSCG00000011966	-	88	76.214	Sus_scrofa
ENSDORG00000029558	Snrpb	75	79.070	ENSTGUG00000005684	SNRPB	56	96.296	Taeniopygia_guttata
ENSDORG00000029558	Snrpb	77	91.525	ENSTRUG00000023094	snrpb	70	93.827	Takifugu_rubripes
ENSDORG00000029558	Snrpb	77	91.525	ENSTNIG00000002991	snrpb	67	93.827	Tetraodon_nigroviridis
ENSDORG00000029558	Snrpb	76	99.425	ENSUAMG00000005984	-	85	99.435	Ursus_americanus
ENSDORG00000029558	Snrpb	59	100.000	ENSUMAG00000002123	-	62	100.000	Ursus_maritimus
ENSDORG00000029558	Snrpb	100	99.130	ENSVVUG00000025654	-	96	99.130	Vulpes_vulpes
ENSDORG00000029558	Snrpb	95	78.733	ENSVVUG00000010086	-	82	80.000	Vulpes_vulpes
ENSDORG00000029558	Snrpb	93	94.884	ENSXETG00000027266	snrpb	69	95.122	Xenopus_tropicalis
ENSDORG00000029558	Snrpb	90	67.476	ENSXMAG00000028767	snrpb	58	95.556	Xiphophorus_maculatus