EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000029740 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 1003 bases
Position: chrKN674982.1:1184-2186
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000021489	LSM	PF01423.22	8.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000029522	-	249	-	ENSDORP00000021489	82 (aa)	-	UPI000BACF974

Gene Model

Click here to download ENSDORG00000029740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000029740's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000029740	-	68	51.786	ENSDORG00000000933	Lsm6	70	51.786
ENSDORG00000029740	-	68	87.500	ENSDORG00000025351	-	78	87.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000029740	-	85	98.571	ENSG00000139343	SNRPF	81	98.571	Homo_sapiens
ENSDORG00000029740	-	73	83.333	ENSAMEG00000018718	-	69	84.746	Ailuropoda_melanoleuca
ENSDORG00000029740	-	85	98.571	ENSAMEG00000002166	-	82	98.571	Ailuropoda_melanoleuca
ENSDORG00000029740	-	72	94.915	ENSACIG00000013216	snrpf	69	94.915	Amphilophus_citrinellus
ENSDORG00000029740	-	72	94.915	ENSAOCG00000015108	snrpf	69	94.915	Amphiprion_ocellaris
ENSDORG00000029740	-	72	94.915	ENSAPEG00000022022	snrpf	69	94.915	Amphiprion_percula
ENSDORG00000029740	-	72	94.915	ENSATEG00000022625	snrpf	63	94.915	Anabas_testudineus
ENSDORG00000029740	-	85	97.143	ENSACAG00000014073	SNRPF	80	97.143	Anolis_carolinensis
ENSDORG00000029740	-	72	64.407	ENSANAG00000025860	-	63	64.407	Aotus_nancymaae
ENSDORG00000029740	-	72	89.831	ENSANAG00000020297	-	54	89.831	Aotus_nancymaae
ENSDORG00000029740	-	85	98.571	ENSANAG00000032845	SNRPF	81	98.571	Aotus_nancymaae
ENSDORG00000029740	-	72	94.915	ENSACLG00000016066	snrpf	69	94.915	Astatotilapia_calliptera
ENSDORG00000029740	-	72	91.525	ENSAMXG00000007421	snrpf	68	91.525	Astyanax_mexicanus
ENSDORG00000029740	-	85	98.571	ENSBTAG00000016271	SNRPF	81	98.571	Bos_taurus
ENSDORG00000029740	-	90	79.487	ENSBTAG00000050012	-	93	78.667	Bos_taurus
ENSDORG00000029740	-	78	68.750	WBGene00004918	snr-5	69	71.186	Caenorhabditis_elegans
ENSDORG00000029740	-	85	98.571	ENSCJAG00000002705	-	81	98.571	Callithrix_jacchus
ENSDORG00000029740	-	70	92.982	ENSCAFG00000031151	-	69	93.220	Canis_familiaris
ENSDORG00000029740	-	85	98.571	ENSCAFG00000006395	-	63	98.571	Canis_familiaris
ENSDORG00000029740	-	82	85.075	ENSCAFG00020013161	-	63	94.915	Canis_lupus_dingo
ENSDORG00000029740	-	70	92.982	ENSCAFG00020010823	-	69	93.220	Canis_lupus_dingo
ENSDORG00000029740	-	80	93.939	ENSTSYG00000031636	-	50	94.915	Carlito_syrichta
ENSDORG00000029740	-	74	85.246	ENSTSYG00000030635	-	70	85.246	Carlito_syrichta
ENSDORG00000029740	-	72	90.000	ENSTSYG00000036502	-	68	90.000	Carlito_syrichta
ENSDORG00000029740	-	85	98.571	ENSCAPG00000007242	SNRPF	82	98.571	Cavia_aperea
ENSDORG00000029740	-	85	98.571	ENSCPOG00000013898	SNRPF	81	98.571	Cavia_porcellus
ENSDORG00000029740	-	85	97.143	ENSCCAG00000017356	-	81	97.143	Cebus_capucinus
ENSDORG00000029740	-	85	98.571	ENSCCAG00000037378	-	81	98.571	Cebus_capucinus
ENSDORG00000029740	-	85	98.571	ENSCLAG00000007200	SNRPF	81	98.571	Chinchilla_lanigera
ENSDORG00000029740	-	85	98.571	ENSCSAG00000003602	-	57	98.571	Chlorocebus_sabaeus
ENSDORG00000029740	-	73	79.688	ENSCHOG00000009392	SNRPF	75	97.917	Choloepus_hoffmanni
ENSDORG00000029740	-	72	89.831	ENSCPBG00000006227	-	69	89.831	Chrysemys_picta_bellii
ENSDORG00000029740	-	100	77.381	ENSCPBG00000026463	-	85	76.712	Chrysemys_picta_bellii
ENSDORG00000029740	-	85	87.143	ENSCPBG00000001985	-	70	89.831	Chrysemys_picta_bellii
ENSDORG00000029740	-	85	85.714	ENSCSAVG00000007498	-	67	88.136	Ciona_savignyi
ENSDORG00000029740	-	85	98.571	ENSCGRG00001017100	-	81	98.571	Cricetulus_griseus_chok1gshd
ENSDORG00000029740	-	78	92.188	ENSCGRG00000018878	-	73	91.525	Cricetulus_griseus_crigri
ENSDORG00000029740	-	85	98.571	ENSCGRG00000000336	-	81	98.571	Cricetulus_griseus_crigri
ENSDORG00000029740	-	72	93.220	ENSCSEG00000004748	snrpf	69	93.220	Cynoglossus_semilaevis
ENSDORG00000029740	-	72	91.803	ENSDARG00000105037	snrpf	69	91.803	Danio_rerio
ENSDORG00000029740	-	85	97.143	ENSDNOG00000048989	-	63	97.143	Dasypus_novemcinctus
ENSDORG00000029740	-	72	83.051	ENSDNOG00000049373	-	51	83.051	Dasypus_novemcinctus
ENSDORG00000029740	-	85	75.714	FBgn0000426	SmF	67	79.661	Drosophila_melanogaster
ENSDORG00000029740	-	85	98.571	ENSETEG00000001558	-	81	98.571	Echinops_telfairi
ENSDORG00000029740	-	84	72.464	ENSEBUG00000001793	-	59	83.636	Eptatretus_burgeri
ENSDORG00000029740	-	85	98.571	ENSECAG00000019817	SNRPF	57	98.571	Equus_caballus
ENSDORG00000029740	-	85	98.571	ENSEEUG00000013509	SNRPF	82	98.571	Erinaceus_europaeus
ENSDORG00000029740	-	72	91.525	ENSELUG00000003121	RUXF	69	91.525	Esox_lucius
ENSDORG00000029740	-	85	88.571	ENSELUG00000007737	RUXF	68	89.831	Esox_lucius
ENSDORG00000029740	-	72	72.881	ENSFCAG00000021942	-	67	72.881	Felis_catus
ENSDORG00000029740	-	98	66.667	ENSFCAG00000031148	-	72	64.103	Felis_catus
ENSDORG00000029740	-	85	98.571	ENSFCAG00000029966	-	81	98.571	Felis_catus
ENSDORG00000029740	-	85	98.571	ENSFALG00000010799	SNRPF	81	98.571	Ficedula_albicollis
ENSDORG00000029740	-	85	98.571	ENSFDAG00000002831	-	81	98.571	Fukomys_damarensis
ENSDORG00000029740	-	72	94.915	ENSFHEG00000003240	snrpf	52	94.915	Fundulus_heteroclitus
ENSDORG00000029740	-	72	94.915	ENSGMOG00000007741	snrpf	69	94.915	Gadus_morhua
ENSDORG00000029740	-	85	98.571	ENSGALG00000011409	SNRPF	81	98.571	Gallus_gallus
ENSDORG00000029740	-	72	94.915	ENSGAFG00000016187	snrpf	68	94.915	Gambusia_affinis
ENSDORG00000029740	-	72	93.220	ENSGACG00000020055	snrpf	69	93.220	Gasterosteus_aculeatus
ENSDORG00000029740	-	79	74.627	ENSGAGG00000014132	-	81	74.627	Gopherus_agassizii
ENSDORG00000029740	-	85	91.429	ENSGAGG00000012945	-	54	94.915	Gopherus_agassizii
ENSDORG00000029740	-	73	90.000	ENSGAGG00000011163	-	86	93.878	Gopherus_agassizii
ENSDORG00000029740	-	85	88.571	ENSGAGG00000022991	-	69	91.525	Gopherus_agassizii
ENSDORG00000029740	-	65	98.113	ENSGGOG00000039936	-	68	98.113	Gorilla_gorilla
ENSDORG00000029740	-	85	98.571	ENSGGOG00000001127	-	82	98.571	Gorilla_gorilla
ENSDORG00000029740	-	62	84.314	ENSGGOG00000039564	-	63	82.979	Gorilla_gorilla
ENSDORG00000029740	-	85	98.571	ENSHGLG00000009108	SNRPF	81	98.571	Heterocephalus_glaber_female
ENSDORG00000029740	-	85	97.143	ENSHGLG00000021172	-	81	97.143	Heterocephalus_glaber_female
ENSDORG00000029740	-	85	97.143	ENSHGLG00100019596	-	81	97.143	Heterocephalus_glaber_male
ENSDORG00000029740	-	85	98.571	ENSHGLG00100008103	-	82	98.571	Heterocephalus_glaber_male
ENSDORG00000029740	-	72	94.915	ENSIPUG00000018994	snrpf	69	94.915	Ictalurus_punctatus
ENSDORG00000029740	-	85	98.571	ENSSTOG00000010434	-	81	98.571	Ictidomys_tridecemlineatus
ENSDORG00000029740	-	82	92.537	ENSJJAG00000004828	-	86	94.643	Jaculus_jaculus
ENSDORG00000029740	-	85	84.286	ENSJJAG00000010502	-	70	86.441	Jaculus_jaculus
ENSDORG00000029740	-	85	81.429	ENSJJAG00000004558	-	70	83.051	Jaculus_jaculus
ENSDORG00000029740	-	85	98.571	ENSJJAG00000011272	-	81	98.571	Jaculus_jaculus
ENSDORG00000029740	-	72	94.915	ENSKMAG00000013566	snrpf	69	94.915	Kryptolebias_marmoratus
ENSDORG00000029740	-	72	93.220	ENSLBEG00000008800	snrpf	69	93.220	Labrus_bergylta
ENSDORG00000029740	-	85	98.571	ENSLACG00000002456	-	60	98.571	Latimeria_chalumnae
ENSDORG00000029740	-	72	91.525	ENSLOCG00000015744	snrpf	69	91.525	Lepisosteus_oculatus
ENSDORG00000029740	-	85	98.571	ENSLAFG00000017426	SNRPF	81	98.571	Loxodonta_africana
ENSDORG00000029740	-	72	93.220	ENSMAMG00000016593	snrpf	69	93.220	Mastacembelus_armatus
ENSDORG00000029740	-	72	94.915	ENSMZEG00005014701	snrpf	69	94.915	Maylandia_zebra
ENSDORG00000029740	-	85	98.571	ENSMGAG00000011453	-	63	98.571	Meleagris_gallopavo
ENSDORG00000029740	-	85	98.571	ENSMAUG00000019737	-	95	98.571	Mesocricetus_auratus
ENSDORG00000029740	-	74	91.803	ENSMAUG00000010289	-	76	91.803	Mesocricetus_auratus
ENSDORG00000029740	-	85	98.571	ENSMAUG00000016909	-	95	98.571	Mesocricetus_auratus
ENSDORG00000029740	-	72	91.525	ENSMAUG00000008799	-	69	91.525	Mesocricetus_auratus
ENSDORG00000029740	-	85	98.571	ENSMICG00000012153	-	81	98.571	Microcebus_murinus
ENSDORG00000029740	-	85	97.143	ENSMICG00000030494	-	56	97.143	Microcebus_murinus
ENSDORG00000029740	-	85	98.571	ENSMOCG00000020437	Snrpf	81	98.571	Microtus_ochrogaster
ENSDORG00000029740	-	72	81.356	ENSMOCG00000022166	-	64	81.356	Microtus_ochrogaster
ENSDORG00000029740	-	72	83.051	ENSMOCG00000020220	-	75	83.051	Microtus_ochrogaster
ENSDORG00000029740	-	72	93.220	ENSMMOG00000007127	snrpf	69	93.220	Mola_mola
ENSDORG00000029740	-	85	98.571	ENSMODG00000008091	SNRPF	61	98.571	Monodelphis_domestica
ENSDORG00000029740	-	72	94.915	ENSMALG00000012328	snrpf	69	94.915	Monopterus_albus
ENSDORG00000029740	-	85	98.571	MGP_CAROLIEiJ_G0015735	-	81	98.571	Mus_caroli
ENSDORG00000029740	-	85	98.571	ENSMUSG00000020018	Snrpf	81	98.571	Mus_musculus
ENSDORG00000029740	-	85	98.571	MGP_PahariEiJ_G0031350	Snrpf	81	98.571	Mus_pahari
ENSDORG00000029740	-	85	98.571	MGP_SPRETEiJ_G0016553	Snrpf	81	98.571	Mus_spretus
ENSDORG00000029740	-	85	98.571	ENSMPUG00000007176	-	63	98.571	Mustela_putorius_furo
ENSDORG00000029740	-	85	98.571	ENSMLUG00000027932	-	66	98.571	Myotis_lucifugus
ENSDORG00000029740	-	85	98.571	ENSMLUG00000029201	-	66	98.571	Myotis_lucifugus
ENSDORG00000029740	-	85	98.571	ENSMLUG00000013577	-	82	98.571	Myotis_lucifugus
ENSDORG00000029740	-	85	77.143	ENSMLUG00000026269	-	56	74.576	Myotis_lucifugus
ENSDORG00000029740	-	85	98.571	ENSMLUG00000026149	-	66	98.571	Myotis_lucifugus
ENSDORG00000029740	-	76	88.710	ENSNGAG00000005851	-	69	88.136	Nannospalax_galili
ENSDORG00000029740	-	85	98.571	ENSNGAG00000024292	-	81	98.571	Nannospalax_galili
ENSDORG00000029740	-	72	94.915	ENSNBRG00000011682	snrpf	60	94.915	Neolamprologus_brichardi
ENSDORG00000029740	-	72	61.017	ENSMEUG00000000671	SNRPF	69	61.017	Notamacropus_eugenii
ENSDORG00000029740	-	85	98.571	ENSODEG00000010328	-	82	98.571	Octodon_degus
ENSDORG00000029740	-	85	98.571	ENSOCUG00000010925	SNRPF	62	98.571	Oryctolagus_cuniculus
ENSDORG00000029740	-	72	91.525	ENSORLG00020008216	snrpf	69	91.525	Oryzias_latipes_hni
ENSDORG00000029740	-	72	91.525	ENSORLG00015007418	snrpf	69	91.525	Oryzias_latipes_hsok
ENSDORG00000029740	-	72	93.220	ENSOMEG00000003018	snrpf	69	93.220	Oryzias_melastigma
ENSDORG00000029740	-	85	97.143	ENSOGAG00000030323	-	81	97.143	Otolemur_garnettii
ENSDORG00000029740	-	85	98.571	ENSOARG00000011853	-	61	98.571	Ovis_aries
ENSDORG00000029740	-	91	67.532	ENSPPAG00000037479	-	69	74.576	Pan_paniscus
ENSDORG00000029740	-	65	100.000	ENSPPAG00000037544	-	68	100.000	Pan_paniscus
ENSDORG00000029740	-	98	65.476	ENSPPRG00000007449	-	77	64.000	Panthera_pardus
ENSDORG00000029740	-	85	98.571	ENSPPRG00000005875	-	81	98.571	Panthera_pardus
ENSDORG00000029740	-	98	67.857	ENSPTIG00000005117	-	89	64.000	Panthera_tigris_altaica
ENSDORG00000029740	-	85	98.571	ENSPTIG00000007520	SNRPF	81	98.571	Panthera_tigris_altaica
ENSDORG00000029740	-	77	74.603	ENSPTRG00000047717	-	69	72.881	Pan_troglodytes
ENSDORG00000029740	-	65	100.000	ENSPTRG00000043814	-	68	100.000	Pan_troglodytes
ENSDORG00000029740	-	72	94.915	ENSPKIG00000014784	snrpf	65	94.915	Paramormyrops_kingsleyae
ENSDORG00000029740	-	85	98.571	ENSPSIG00000016462	SNRPF	81	98.571	Pelodiscus_sinensis
ENSDORG00000029740	-	72	93.220	ENSPMGG00000023548	snrpf	69	93.220	Periophthalmus_magnuspinnatus
ENSDORG00000029740	-	85	98.571	ENSPEMG00000023326	Snrpf	81	98.571	Peromyscus_maniculatus_bairdii
ENSDORG00000029740	-	72	94.915	ENSPLAG00000023932	snrpf	69	94.915	Poecilia_latipinna
ENSDORG00000029740	-	72	94.915	ENSPMEG00000003377	snrpf	69	94.915	Poecilia_mexicana
ENSDORG00000029740	-	72	94.915	ENSPREG00000022635	snrpf	68	94.915	Poecilia_reticulata
ENSDORG00000029740	-	85	98.571	ENSPPYG00000004847	-	81	98.571	Pongo_abelii
ENSDORG00000029740	-	85	98.571	ENSPCOG00000023833	-	81	98.571	Propithecus_coquereli
ENSDORG00000029740	-	85	98.571	ENSPVAG00000009036	SNRPF	81	98.571	Pteropus_vampyrus
ENSDORG00000029740	-	72	94.915	ENSPNYG00000021712	snrpf	69	94.915	Pundamilia_nyererei
ENSDORG00000029740	-	72	93.220	ENSPNAG00000019117	snrpf	69	93.220	Pygocentrus_nattereri
ENSDORG00000029740	-	85	98.571	ENSRNOG00000005556	Snrpf	81	98.571	Rattus_norvegicus
ENSDORG00000029740	-	72	94.915	ENSRBIG00000030414	-	69	94.915	Rhinopithecus_bieti
ENSDORG00000029740	-	72	94.915	ENSRROG00000021975	-	69	94.915	Rhinopithecus_roxellana
ENSDORG00000029740	-	67	57.143	YPR182W	SMX3	65	57.143	Saccharomyces_cerevisiae
ENSDORG00000029740	-	85	97.143	ENSSBOG00000012868	-	81	97.143	Saimiri_boliviensis_boliviensis
ENSDORG00000029740	-	76	79.032	ENSSBOG00000027638	-	71	79.032	Saimiri_boliviensis_boliviensis
ENSDORG00000029740	-	85	98.571	ENSSBOG00000036179	-	81	98.571	Saimiri_boliviensis_boliviensis
ENSDORG00000029740	-	72	81.356	ENSSBOG00000032297	-	65	81.356	Saimiri_boliviensis_boliviensis
ENSDORG00000029740	-	85	98.571	ENSSHAG00000012294	SNRPF	63	98.571	Sarcophilus_harrisii
ENSDORG00000029740	-	60	93.878	ENSSFOG00015021523	snrpf	73	93.878	Scleropages_formosus
ENSDORG00000029740	-	72	93.220	ENSSMAG00000005533	snrpf	68	93.220	Scophthalmus_maximus
ENSDORG00000029740	-	60	93.878	ENSSDUG00000016283	snrpf	58	93.878	Seriola_dumerili
ENSDORG00000029740	-	79	72.308	ENSSLDG00000003885	-	72	76.271	Seriola_lalandi_dorsalis
ENSDORG00000029740	-	72	94.915	ENSSLDG00000005119	snrpf	69	94.915	Seriola_lalandi_dorsalis
ENSDORG00000029740	-	85	98.571	ENSSPUG00000014590	-	82	98.571	Sphenodon_punctatus
ENSDORG00000029740	-	72	94.915	ENSSPAG00000003283	snrpf	67	94.915	Stegastes_partitus
ENSDORG00000029740	-	85	98.571	ENSSSCG00000000895	SNRPF	81	98.571	Sus_scrofa
ENSDORG00000029740	-	71	93.103	ENSTRUG00000014956	snrpf	84	93.103	Takifugu_rubripes
ENSDORG00000029740	-	72	93.220	ENSTNIG00000012672	snrpf	69	93.220	Tetraodon_nigroviridis
ENSDORG00000029740	-	72	61.017	ENSTTRG00000006070	SNRPF	69	61.017	Tursiops_truncatus
ENSDORG00000029740	-	85	98.571	ENSUAMG00000008176	-	81	98.571	Ursus_americanus
ENSDORG00000029740	-	85	84.286	ENSUAMG00000001101	-	69	86.441	Ursus_americanus
ENSDORG00000029740	-	72	86.441	ENSUMAG00000006177	-	69	86.441	Ursus_maritimus
ENSDORG00000029740	-	85	98.571	ENSUMAG00000003528	-	81	98.571	Ursus_maritimus
ENSDORG00000029740	-	85	98.571	ENSVPAG00000008712	-	81	98.571	Vicugna_pacos
ENSDORG00000029740	-	76	88.710	ENSVVUG00000023821	-	76	88.136	Vulpes_vulpes
ENSDORG00000029740	-	72	67.213	ENSXETG00000021630	snrpf	70	63.934	Xenopus_tropicalis
ENSDORG00000029740	-	72	94.915	ENSXCOG00000013860	snrpf	68	94.915	Xiphophorus_couchianus
ENSDORG00000029740	-	72	94.915	ENSXMAG00000015448	snrpf	69	94.915	Xiphophorus_maculatus