EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000029761 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Minus strand
Length: 748 bases
Position: chrKN672354.1:18962855-18963602
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000020932	RRM_1	PF00076.22	4.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000036097	-	369	-	ENSDORP00000020932	122 (aa)	-	UPI000BAD26FC

Gene Model

Click here to download ENSDORG00000029761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000029761's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000029761	-	98	82.540	ENSDORG00000009772	Sf3b6	99	82.540
ENSDORG00000029761	-	89	33.333	ENSDORG00000024574	Srsf10	53	33.962
ENSDORG00000029761	-	100	100.000	ENSDORG00000027390	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000029761	-	98	82.540	ENSG00000115128	SF3B6	99	82.540	Homo_sapiens
ENSDORG00000029761	-	98	80.952	ENSAPOG00000023788	sf3b6	99	80.952	Acanthochromis_polyacanthus
ENSDORG00000029761	-	98	82.540	ENSAMEG00000002786	SF3B6	99	82.540	Ailuropoda_melanoleuca
ENSDORG00000029761	-	98	80.952	ENSACIG00000012608	sf3b6	99	80.952	Amphilophus_citrinellus
ENSDORG00000029761	-	98	80.952	ENSAOCG00000013394	sf3b6	99	80.952	Amphiprion_ocellaris
ENSDORG00000029761	-	98	80.952	ENSAPEG00000015311	sf3b6	99	80.952	Amphiprion_percula
ENSDORG00000029761	-	98	80.952	ENSATEG00000016569	sf3b6	99	80.952	Anabas_testudineus
ENSDORG00000029761	-	98	82.540	ENSACAG00000011677	SF3B6	99	82.540	Anolis_carolinensis
ENSDORG00000029761	-	98	82.540	ENSANAG00000027284	SF3B6	95	82.540	Aotus_nancymaae
ENSDORG00000029761	-	98	80.952	ENSACLG00000007793	sf3b6	99	80.952	Astatotilapia_calliptera
ENSDORG00000029761	-	98	82.540	ENSAMXG00000034888	sf3b6	99	82.540	Astyanax_mexicanus
ENSDORG00000029761	-	98	81.746	ENSBTAG00000049128	-	99	81.746	Bos_taurus
ENSDORG00000029761	-	98	82.540	ENSBTAG00000003407	SF3B6	99	82.540	Bos_taurus
ENSDORG00000029761	-	90	60.345	WBGene00016808	C50D2.5	83	60.345	Caenorhabditis_elegans
ENSDORG00000029761	-	98	82.540	ENSCJAG00000007716	SF3B6	99	82.540	Callithrix_jacchus
ENSDORG00000029761	-	98	82.540	ENSCAFG00000003957	SF3B6	99	82.540	Canis_familiaris
ENSDORG00000029761	-	98	82.540	ENSCAFG00020025576	SF3B6	99	82.540	Canis_lupus_dingo
ENSDORG00000029761	-	98	82.540	ENSCHIG00000009902	SF3B6	99	82.540	Capra_hircus
ENSDORG00000029761	-	98	82.540	ENSTSYG00000013978	SF3B6	99	82.540	Carlito_syrichta
ENSDORG00000029761	-	98	79.365	ENSCAPG00000016302	SF3B6	100	79.365	Cavia_aperea
ENSDORG00000029761	-	98	82.540	ENSCPOG00000008016	SF3B6	99	82.540	Cavia_porcellus
ENSDORG00000029761	-	98	82.540	ENSCCAG00000036653	SF3B6	99	82.540	Cebus_capucinus
ENSDORG00000029761	-	97	79.200	ENSCCAG00000018894	-	95	79.200	Cebus_capucinus
ENSDORG00000029761	-	98	82.540	ENSCATG00000030936	SF3B6	99	82.540	Cercocebus_atys
ENSDORG00000029761	-	98	82.540	ENSCLAG00000014512	SF3B6	99	82.540	Chinchilla_lanigera
ENSDORG00000029761	-	98	82.540	ENSCSAG00000008390	SF3B6	99	82.540	Chlorocebus_sabaeus
ENSDORG00000029761	-	98	82.540	ENSCHOG00000000689	SF3B6	99	82.540	Choloepus_hoffmanni
ENSDORG00000029761	-	98	63.636	ENSCHOG00000013886	-	100	63.636	Choloepus_hoffmanni
ENSDORG00000029761	-	98	82.540	ENSCPBG00000020042	SF3B6	99	82.540	Chrysemys_picta_bellii
ENSDORG00000029761	-	96	66.129	ENSCING00000012689	-	96	66.129	Ciona_intestinalis
ENSDORG00000029761	-	98	82.540	ENSCANG00000030559	SF3B6	99	82.540	Colobus_angolensis_palliatus
ENSDORG00000029761	-	98	82.540	ENSCGRG00001014595	Sf3b6	99	82.540	Cricetulus_griseus_chok1gshd
ENSDORG00000029761	-	98	82.540	ENSCGRG00000005272	Sf3b6	99	82.540	Cricetulus_griseus_crigri
ENSDORG00000029761	-	98	80.159	ENSCSEG00000019017	sf3b6	99	80.159	Cynoglossus_semilaevis
ENSDORG00000029761	-	98	81.746	ENSCVAG00000005055	sf3b6	99	81.746	Cyprinodon_variegatus
ENSDORG00000029761	-	98	82.540	ENSDARG00000009753	sf3b6	99	82.540	Danio_rerio
ENSDORG00000029761	-	98	82.540	ENSDNOG00000007148	SF3B6	99	82.540	Dasypus_novemcinctus
ENSDORG00000029761	-	88	65.487	FBgn0035692	Sf3b6	92	65.487	Drosophila_melanogaster
ENSDORG00000029761	-	89	78.261	ENSEBUG00000004424	sf3b6	89	78.261	Eptatretus_burgeri
ENSDORG00000029761	-	98	82.540	ENSEASG00005009993	SF3B6	99	82.540	Equus_asinus_asinus
ENSDORG00000029761	-	98	73.016	ENSEASG00005008061	-	99	73.016	Equus_asinus_asinus
ENSDORG00000029761	-	76	75.532	ENSECAG00000027755	-	79	75.532	Equus_caballus
ENSDORG00000029761	-	76	84.043	ENSECAG00000015618	SF3B6	84	84.043	Equus_caballus
ENSDORG00000029761	-	98	80.952	ENSELUG00000010379	sf3b6	99	80.952	Esox_lucius
ENSDORG00000029761	-	98	82.540	ENSFCAG00000031365	SF3B6	99	82.540	Felis_catus
ENSDORG00000029761	-	98	82.540	ENSFALG00000001651	SF3B6	99	82.540	Ficedula_albicollis
ENSDORG00000029761	-	98	82.540	ENSFDAG00000007864	SF3B6	99	82.540	Fukomys_damarensis
ENSDORG00000029761	-	98	81.746	ENSFHEG00000000685	sf3b6	99	81.746	Fundulus_heteroclitus
ENSDORG00000029761	-	98	80.159	ENSGMOG00000005123	sf3b6	99	80.159	Gadus_morhua
ENSDORG00000029761	-	70	83.516	ENSGALG00000016501	SF3B6	100	83.516	Gallus_gallus
ENSDORG00000029761	-	98	80.952	ENSGAFG00000009334	sf3b6	99	80.952	Gambusia_affinis
ENSDORG00000029761	-	98	80.159	ENSGACG00000004803	sf3b6	99	80.159	Gasterosteus_aculeatus
ENSDORG00000029761	-	98	82.540	ENSGAGG00000012240	SF3B6	99	82.540	Gopherus_agassizii
ENSDORG00000029761	-	98	82.540	ENSGGOG00000040806	SF3B6	99	82.540	Gorilla_gorilla
ENSDORG00000029761	-	98	80.952	ENSHBUG00000012556	sf3b6	99	80.952	Haplochromis_burtoni
ENSDORG00000029761	-	98	82.540	ENSHGLG00000014895	SF3B14	99	82.540	Heterocephalus_glaber_female
ENSDORG00000029761	-	98	82.540	ENSHGLG00100008639	SF3B14	99	82.540	Heterocephalus_glaber_male
ENSDORG00000029761	-	98	81.746	ENSHCOG00000019962	sf3b6	99	81.746	Hippocampus_comes
ENSDORG00000029761	-	98	82.540	ENSIPUG00000023800	sf3b6	99	82.540	Ictalurus_punctatus
ENSDORG00000029761	-	98	82.540	ENSJJAG00000021819	Sf3b6	99	82.540	Jaculus_jaculus
ENSDORG00000029761	-	98	80.952	ENSKMAG00000004000	sf3b6	99	80.952	Kryptolebias_marmoratus
ENSDORG00000029761	-	98	80.952	ENSLBEG00000022937	sf3b6	99	80.952	Labrus_bergylta
ENSDORG00000029761	-	98	82.540	ENSLACG00000014326	SF3B6	99	82.540	Latimeria_chalumnae
ENSDORG00000029761	-	98	82.540	ENSLOCG00000016481	sf3b6	99	82.540	Lepisosteus_oculatus
ENSDORG00000029761	-	98	82.540	ENSLAFG00000029423	SF3B6	99	82.540	Loxodonta_africana
ENSDORG00000029761	-	98	82.540	ENSMFAG00000038178	SF3B6	99	82.540	Macaca_fascicularis
ENSDORG00000029761	-	98	82.540	ENSMMUG00000001282	SF3B6	99	82.540	Macaca_mulatta
ENSDORG00000029761	-	98	82.540	ENSMNEG00000029050	SF3B6	99	82.540	Macaca_nemestrina
ENSDORG00000029761	-	98	82.540	ENSMLEG00000019896	SF3B6	99	82.540	Mandrillus_leucophaeus
ENSDORG00000029761	-	76	81.915	ENSMAMG00000007713	sf3b6	84	81.915	Mastacembelus_armatus
ENSDORG00000029761	-	98	80.952	ENSMZEG00005003557	sf3b6	99	80.952	Maylandia_zebra
ENSDORG00000029761	-	98	82.540	ENSMGAG00000014057	SF3B6	99	82.540	Meleagris_gallopavo
ENSDORG00000029761	-	98	82.540	ENSMAUG00000000586	-	99	82.540	Mesocricetus_auratus
ENSDORG00000029761	-	98	82.540	ENSMICG00000032874	SF3B6	99	82.540	Microcebus_murinus
ENSDORG00000029761	-	98	82.540	ENSMOCG00000014338	Sf3b6	99	82.540	Microtus_ochrogaster
ENSDORG00000029761	-	98	81.746	ENSMMOG00000015653	sf3b6	99	81.746	Mola_mola
ENSDORG00000029761	-	98	80.952	ENSMODG00000002144	SF3B6	99	80.952	Monodelphis_domestica
ENSDORG00000029761	-	98	81.746	ENSMALG00000019642	sf3b6	67	81.746	Monopterus_albus
ENSDORG00000029761	-	98	82.540	MGP_CAROLIEiJ_G0017590	Sf3b6	99	82.540	Mus_caroli
ENSDORG00000029761	-	98	82.540	ENSMUSG00000037361	Sf3b6	100	84.071	Mus_musculus
ENSDORG00000029761	-	98	82.540	MGP_PahariEiJ_G0029348	Sf3b6	99	82.540	Mus_pahari
ENSDORG00000029761	-	98	82.540	MGP_SPRETEiJ_G0018434	Sf3b6	99	82.540	Mus_spretus
ENSDORG00000029761	-	98	82.540	ENSMPUG00000013957	SF3B6	99	82.540	Mustela_putorius_furo
ENSDORG00000029761	-	98	81.746	ENSMLUG00000002473	SF3B6	99	81.746	Myotis_lucifugus
ENSDORG00000029761	-	98	82.540	ENSNGAG00000020256	Sf3b6	99	82.540	Nannospalax_galili
ENSDORG00000029761	-	98	80.952	ENSNBRG00000018244	sf3b6	99	80.952	Neolamprologus_brichardi
ENSDORG00000029761	-	98	82.540	ENSNLEG00000000815	-	99	82.540	Nomascus_leucogenys
ENSDORG00000029761	-	86	81.982	ENSODEG00000009547	SF3B6	92	81.982	Octodon_degus
ENSDORG00000029761	-	98	80.952	ENSONIG00000001219	sf3b6	99	80.952	Oreochromis_niloticus
ENSDORG00000029761	-	98	82.540	ENSOANG00000007627	SF3B6	99	82.540	Ornithorhynchus_anatinus
ENSDORG00000029761	-	98	82.540	ENSOCUG00000022008	SF3B6	99	82.540	Oryctolagus_cuniculus
ENSDORG00000029761	-	98	80.952	ENSORLG00000015955	sf3b6	99	80.952	Oryzias_latipes
ENSDORG00000029761	-	98	80.952	ENSORLG00020005875	sf3b6	99	80.952	Oryzias_latipes_hni
ENSDORG00000029761	-	98	80.952	ENSORLG00015001347	sf3b6	99	80.952	Oryzias_latipes_hsok
ENSDORG00000029761	-	98	80.952	ENSOMEG00000014506	sf3b6	99	80.952	Oryzias_melastigma
ENSDORG00000029761	-	98	82.540	ENSOGAG00000004468	SF3B6	99	82.540	Otolemur_garnettii
ENSDORG00000029761	-	98	82.540	ENSOARG00000017819	SF3B6	99	82.540	Ovis_aries
ENSDORG00000029761	-	98	82.540	ENSPPAG00000027816	SF3B6	99	82.540	Pan_paniscus
ENSDORG00000029761	-	98	82.540	ENSPPRG00000023257	SF3B6	99	82.540	Panthera_pardus
ENSDORG00000029761	-	98	82.540	ENSPTIG00000013322	SF3B6	99	82.540	Panthera_tigris_altaica
ENSDORG00000029761	-	98	82.540	ENSPTRG00000011709	SF3B6	99	82.540	Pan_troglodytes
ENSDORG00000029761	-	98	82.540	ENSPANG00000021963	SF3B6	99	82.540	Papio_anubis
ENSDORG00000029761	-	98	82.540	ENSPKIG00000012311	sf3b6	99	82.540	Paramormyrops_kingsleyae
ENSDORG00000029761	-	91	82.906	ENSPSIG00000017115	SF3B6	100	82.906	Pelodiscus_sinensis
ENSDORG00000029761	-	76	81.915	ENSPMGG00000014621	sf3b6	77	81.915	Periophthalmus_magnuspinnatus
ENSDORG00000029761	-	98	82.540	ENSPEMG00000010308	Sf3b6	99	82.540	Peromyscus_maniculatus_bairdii
ENSDORG00000029761	-	89	75.439	ENSPMAG00000006008	sf3b6	90	75.439	Petromyzon_marinus
ENSDORG00000029761	-	97	67.200	ENSPCIG00000015858	-	98	67.200	Phascolarctos_cinereus
ENSDORG00000029761	-	98	82.540	ENSPCIG00000022128	-	99	82.540	Phascolarctos_cinereus
ENSDORG00000029761	-	98	80.952	ENSPFOG00000012494	sf3b6	99	80.952	Poecilia_formosa
ENSDORG00000029761	-	98	80.952	ENSPLAG00000020460	sf3b6	99	80.952	Poecilia_latipinna
ENSDORG00000029761	-	98	80.952	ENSPMEG00000004426	sf3b6	99	80.952	Poecilia_mexicana
ENSDORG00000029761	-	98	82.540	ENSPPYG00000012603	SF3B6	99	82.540	Pongo_abelii
ENSDORG00000029761	-	98	82.540	ENSPVAG00000011346	SF3B6	99	82.540	Pteropus_vampyrus
ENSDORG00000029761	-	98	80.952	ENSPNYG00000021832	sf3b6	99	80.952	Pundamilia_nyererei
ENSDORG00000029761	-	98	82.540	ENSPNAG00000008845	sf3b6	99	82.540	Pygocentrus_nattereri
ENSDORG00000029761	-	98	73.016	ENSRNOG00000046172	Sf3b6	99	73.016	Rattus_norvegicus
ENSDORG00000029761	-	98	82.540	ENSRBIG00000039598	SF3B6	99	82.540	Rhinopithecus_bieti
ENSDORG00000029761	-	98	82.540	ENSRROG00000011368	SF3B6	99	82.540	Rhinopithecus_roxellana
ENSDORG00000029761	-	98	82.540	ENSSBOG00000002914	SF3B6	99	82.540	Saimiri_boliviensis_boliviensis
ENSDORG00000029761	-	98	82.540	ENSSFOG00015014370	sf3b6	99	82.540	Scleropages_formosus
ENSDORG00000029761	-	98	80.952	ENSSMAG00000004566	sf3b6	99	80.952	Scophthalmus_maximus
ENSDORG00000029761	-	98	80.952	ENSSDUG00000006538	sf3b6	99	80.952	Seriola_dumerili
ENSDORG00000029761	-	98	80.952	ENSSLDG00000004494	sf3b6	99	80.952	Seriola_lalandi_dorsalis
ENSDORG00000029761	-	98	82.540	ENSSARG00000011902	-	99	82.540	Sorex_araneus
ENSDORG00000029761	-	98	82.540	ENSSPUG00000014919	SF3B6	99	82.540	Sphenodon_punctatus
ENSDORG00000029761	-	98	80.952	ENSSPAG00000013201	sf3b6	99	80.952	Stegastes_partitus
ENSDORG00000029761	-	98	82.540	ENSSSCG00000008587	SF3B6	99	82.540	Sus_scrofa
ENSDORG00000029761	-	98	82.540	ENSTGUG00000013191	SF3B6	99	82.540	Taeniopygia_guttata
ENSDORG00000029761	-	98	80.952	ENSTRUG00000025286	sf3b6	99	80.952	Takifugu_rubripes
ENSDORG00000029761	-	98	80.952	ENSTNIG00000009719	sf3b6	99	80.952	Tetraodon_nigroviridis
ENSDORG00000029761	-	91	82.906	ENSTBEG00000012532	SF3B6	100	82.906	Tupaia_belangeri
ENSDORG00000029761	-	91	82.906	ENSTTRG00000013430	SF3B6	100	82.906	Tursiops_truncatus
ENSDORG00000029761	-	98	82.540	ENSUAMG00000025329	SF3B6	99	82.540	Ursus_americanus
ENSDORG00000029761	-	98	70.079	ENSUAMG00000000978	-	99	70.079	Ursus_americanus
ENSDORG00000029761	-	98	82.540	ENSUMAG00000022835	SF3B6	99	82.540	Ursus_maritimus
ENSDORG00000029761	-	91	82.906	ENSVPAG00000005546	SF3B6	100	82.906	Vicugna_pacos
ENSDORG00000029761	-	98	82.540	ENSVVUG00000010874	SF3B6	99	82.540	Vulpes_vulpes
ENSDORG00000029761	-	98	81.746	ENSXETG00000018204	sf3b6	99	81.746	Xenopus_tropicalis
ENSDORG00000029761	-	76	81.915	ENSXCOG00000008477	sf3b6	71	81.915	Xiphophorus_couchianus
ENSDORG00000029761	-	98	80.952	ENSXMAG00000010747	sf3b6	99	80.952	Xiphophorus_maculatus