EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDORG00000029995 (Gene tree)
Gene ID: -
Gene Symbol: Rtl3
Alias: D430021I08Rik|Mar3|Mart3|ZHC5|Zcchc5
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 1536 bases
Position: chrKN672462.1:1185923-1187458
Accession: 105995234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000024463	zf-CCHC	PF00098.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000035096	-	1518	XM_013028923	ENSDORP00000024463	505 (aa)	XP_012884377	UPI000BAD2112

Gene Model

Click here to download ENSDORG00000029995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000029995's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000029995	Rtl3	99	60.913	ENSG00000179300	RTL3	99	61.508	Homo_sapiens
ENSDORG00000029995	Rtl3	100	60.474	ENSTSYG00000008776	RTL3	100	60.079	Carlito_syrichta
ENSDORG00000029995	Rtl3	100	58.453	ENSCGRG00001015952	Rtl3	100	59.494	Cricetulus_griseus_chok1gshd
ENSDORG00000029995	Rtl3	100	64.118	ENSECAG00000029496	RTL3	100	64.118	Equus_caballus
ENSDORG00000029995	Rtl3	100	62.202	ENSSTOG00000027152	RTL3	100	61.002	Ictidomys_tridecemlineatus
ENSDORG00000029995	Rtl3	100	57.486	ENSJJAG00000014790	-	100	56.673	Jaculus_jaculus
ENSDORG00000029995	Rtl3	100	59.563	ENSMAUG00000011823	Rtl3	100	60.109	Mesocricetus_auratus
ENSDORG00000029995	Rtl3	100	66.139	ENSMICG00000004901	RTL3	100	66.535	Microcebus_murinus
ENSDORG00000029995	Rtl3	100	56.318	ENSMOCG00000017247	Rtl3	100	56.318	Microtus_ochrogaster
ENSDORG00000029995	Rtl3	100	58.140	MGP_CAROLIEiJ_G0033333	Rtl3	100	58.676	Mus_caroli
ENSDORG00000029995	Rtl3	100	57.473	ENSMUSG00000047686	Rtl3	100	58.007	Mus_musculus
ENSDORG00000029995	Rtl3	100	58.363	MGP_PahariEiJ_G0031869	Rtl3	100	58.719	Mus_pahari
ENSDORG00000029995	Rtl3	100	57.473	MGP_SPRETEiJ_G0034497	Rtl3	100	58.007	Mus_spretus
ENSDORG00000029995	Rtl3	100	58.053	ENSNGAG00000002851	Rtl3	100	58.053	Nannospalax_galili
ENSDORG00000029995	Rtl3	100	65.187	ENSOCUG00000025689	RTL3	100	65.187	Oryctolagus_cuniculus
ENSDORG00000029995	Rtl3	100	69.565	ENSPCOG00000016711	RTL3	100	69.565	Propithecus_coquereli
ENSDORG00000029995	Rtl3	100	55.929	ENSRNOG00000002429	Rtl3	100	56.637	Rattus_norvegicus
ENSDORG00000029995	Rtl3	100	60.904	ENSTBEG00000002464	RTL3	100	60.904	Tupaia_belangeri