EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDORG00000030220 (Gene tree)
Gene ID: 105991668
Gene Symbol: Stau1
Alias: 5830401L18Rik
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Dipodomys_ordii
Status: putative
Strand: Plus strand
Length: 34417 bases
Position: chrKN672421.1:6652167-6686583
Accession: 105991668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDORP00000020417	dsrm	PF00035.26	5e-32	1	2
ENSDORP00000020417	dsrm	PF00035.26	5e-32	2	2
ENSDORP00000026138	dsrm	PF00035.26	8.4e-29	1	2
ENSDORP00000026138	dsrm	PF00035.26	8.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDORT00000032860	-	1797	XM_013024339	ENSDORP00000026138	495 (aa)	XP_012879793	UPI000BACFFB3
ENSDORT00000028181	-	2003	XM_013024338	ENSDORP00000020417	489 (aa)	XP_012879792	UPI000BAD1E57

Gene Model

Click here to download ENSDORG00000030220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDORG00000030220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDORG00000030220	Stau1	52	33.987	ENSDORG00000013338	Prkra	61	33.505
ENSDORG00000030220	Stau1	85	49.885	ENSDORG00000014308	Stau2	83	50.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDORG00000030220	Stau1	100	91.207	ENSG00000124214	STAU1	99	91.207	Homo_sapiens
ENSDORG00000030220	Stau1	99	72.470	ENSAPOG00000017260	stau1	71	72.470	Acanthochromis_polyacanthus
ENSDORG00000030220	Stau1	99	90.515	ENSAMEG00000013681	STAU1	80	90.515	Ailuropoda_melanoleuca
ENSDORG00000030220	Stau1	99	73.620	ENSACIG00000015918	stau1	71	74.286	Amphilophus_citrinellus
ENSDORG00000030220	Stau1	99	73.482	ENSAOCG00000012224	stau1	71	73.482	Amphiprion_ocellaris
ENSDORG00000030220	Stau1	99	73.684	ENSAPEG00000012308	stau1	71	73.684	Amphiprion_percula
ENSDORG00000030220	Stau1	99	73.673	ENSATEG00000024600	stau1	73	73.673	Anabas_testudineus
ENSDORG00000030220	Stau1	99	84.318	ENSAPLG00000010527	STAU1	69	84.318	Anas_platyrhynchos
ENSDORG00000030220	Stau1	99	83.943	ENSACAG00000015909	STAU1	70	83.943	Anolis_carolinensis
ENSDORG00000030220	Stau1	100	91.111	ENSANAG00000032714	STAU1	99	85.890	Aotus_nancymaae
ENSDORG00000030220	Stau1	99	72.267	ENSACLG00000012270	stau1	71	72.267	Astatotilapia_calliptera
ENSDORG00000030220	Stau1	100	71.341	ENSAMXG00000016812	stau1	84	71.341	Astyanax_mexicanus
ENSDORG00000030220	Stau1	100	91.002	ENSBTAG00000000241	STAU1	85	91.002	Bos_taurus
ENSDORG00000030220	Stau1	100	91.207	ENSCJAG00000016233	STAU1	85	91.207	Callithrix_jacchus
ENSDORG00000030220	Stau1	100	91.002	ENSCAFG00000011347	STAU1	83	91.002	Canis_familiaris
ENSDORG00000030220	Stau1	100	89.718	ENSCAFG00020017123	STAU1	94	89.718	Canis_lupus_dingo
ENSDORG00000030220	Stau1	100	89.980	ENSCHIG00000001799	-	100	83.030	Capra_hircus
ENSDORG00000030220	Stau1	100	89.162	ENSTSYG00000036179	-	85	89.162	Carlito_syrichta
ENSDORG00000030220	Stau1	100	89.571	ENSCAPG00000017041	STAU1	99	89.571	Cavia_aperea
ENSDORG00000030220	Stau1	100	88.687	ENSCPOG00000005566	STAU1	100	88.687	Cavia_porcellus
ENSDORG00000030220	Stau1	100	90.909	ENSCCAG00000034339	STAU1	85	90.909	Cebus_capucinus
ENSDORG00000030220	Stau1	100	91.616	ENSCATG00000028474	STAU1	99	91.515	Cercocebus_atys
ENSDORG00000030220	Stau1	100	92.727	ENSCLAG00000006516	-	100	92.727	Chinchilla_lanigera
ENSDORG00000030220	Stau1	100	75.153	ENSCLAG00000002784	-	98	75.153	Chinchilla_lanigera
ENSDORG00000030220	Stau1	100	91.411	ENSCSAG00000014986	STAU1	99	91.411	Chlorocebus_sabaeus
ENSDORG00000030220	Stau1	100	90.204	ENSCHOG00000001511	STAU1	85	90.204	Choloepus_hoffmanni
ENSDORG00000030220	Stau1	99	83.943	ENSCPBG00000026741	STAU1	71	83.943	Chrysemys_picta_bellii
ENSDORG00000030220	Stau1	100	91.411	ENSCANG00000039220	STAU1	99	82.056	Colobus_angolensis_palliatus
ENSDORG00000030220	Stau1	100	87.677	ENSCGRG00001013453	Stau1	100	87.677	Cricetulus_griseus_chok1gshd
ENSDORG00000030220	Stau1	100	87.677	ENSCGRG00000007216	Stau1	100	87.677	Cricetulus_griseus_crigri
ENSDORG00000030220	Stau1	99	66.393	ENSCSEG00000000792	stau1	68	67.143	Cynoglossus_semilaevis
ENSDORG00000030220	Stau1	99	70.782	ENSCVAG00000005906	stau1	86	71.458	Cyprinodon_variegatus
ENSDORG00000030220	Stau1	99	72.121	ENSDARG00000044182	stau1	78	72.121	Danio_rerio
ENSDORG00000030220	Stau1	100	90.612	ENSDNOG00000014933	STAU1	83	90.612	Dasypus_novemcinctus
ENSDORG00000030220	Stau1	99	92.174	ENSETEG00000018235	STAU1	72	92.174	Echinops_telfairi
ENSDORG00000030220	Stau1	100	91.207	ENSEASG00005023343	STAU1	88	90.541	Equus_asinus_asinus
ENSDORG00000030220	Stau1	100	91.002	ENSECAG00000012894	STAU1	98	91.002	Equus_caballus
ENSDORG00000030220	Stau1	92	89.367	ENSEEUG00000014344	STAU1	68	89.367	Erinaceus_europaeus
ENSDORG00000030220	Stau1	99	71.116	ENSELUG00000002529	stau1	77	71.116	Esox_lucius
ENSDORG00000030220	Stau1	100	91.207	ENSFCAG00000001447	STAU1	99	84.049	Felis_catus
ENSDORG00000030220	Stau1	99	82.305	ENSFALG00000012940	STAU1	70	82.305	Ficedula_albicollis
ENSDORG00000030220	Stau1	100	91.111	ENSFDAG00000014119	-	100	91.111	Fukomys_damarensis
ENSDORG00000030220	Stau1	99	68.852	ENSFDAG00000020837	-	98	68.994	Fukomys_damarensis
ENSDORG00000030220	Stau1	99	72.065	ENSFHEG00000013517	stau1	85	72.393	Fundulus_heteroclitus
ENSDORG00000030220	Stau1	99	61.448	ENSGMOG00000016850	stau1	71	61.448	Gadus_morhua
ENSDORG00000030220	Stau1	99	84.979	ENSGALG00000004736	STAU1	70	84.979	Gallus_gallus
ENSDORG00000030220	Stau1	99	72.414	ENSGAFG00000010437	stau1	71	72.414	Gambusia_affinis
ENSDORG00000030220	Stau1	99	72.525	ENSGACG00000001352	stau1	72	72.525	Gasterosteus_aculeatus
ENSDORG00000030220	Stau1	99	83.745	ENSGAGG00000009825	STAU1	70	83.745	Gopherus_agassizii
ENSDORG00000030220	Stau1	100	91.313	ENSGGOG00000025351	STAU1	99	91.313	Gorilla_gorilla
ENSDORG00000030220	Stau1	99	72.470	ENSHBUG00000023668	stau1	71	72.470	Haplochromis_burtoni
ENSDORG00000030220	Stau1	100	92.434	ENSHGLG00000008730	STAU1	100	92.434	Heterocephalus_glaber_female
ENSDORG00000030220	Stau1	100	92.434	ENSHGLG00100000098	STAU1	100	92.434	Heterocephalus_glaber_male
ENSDORG00000030220	Stau1	99	70.265	ENSHCOG00000018461	stau1	70	70.265	Hippocampus_comes
ENSDORG00000030220	Stau1	94	71.922	ENSIPUG00000023725	stau1	70	71.922	Ictalurus_punctatus
ENSDORG00000030220	Stau1	100	91.616	ENSSTOG00000003634	STAU1	100	91.616	Ictidomys_tridecemlineatus
ENSDORG00000030220	Stau1	100	90.184	ENSJJAG00000020032	Stau1	100	90.184	Jaculus_jaculus
ENSDORG00000030220	Stau1	99	70.492	ENSKMAG00000007135	stau1	71	71.166	Kryptolebias_marmoratus
ENSDORG00000030220	Stau1	99	70.942	ENSLBEG00000020172	stau1	71	70.942	Labrus_bergylta
ENSDORG00000030220	Stau1	99	79.755	ENSLACG00000016157	STAU1	70	78.471	Latimeria_chalumnae
ENSDORG00000030220	Stau1	99	77.755	ENSLOCG00000003134	stau1	71	77.755	Lepisosteus_oculatus
ENSDORG00000030220	Stau1	100	89.571	ENSLAFG00000003238	STAU1	96	89.571	Loxodonta_africana
ENSDORG00000030220	Stau1	100	91.616	ENSMFAG00000040931	STAU1	100	93.015	Macaca_fascicularis
ENSDORG00000030220	Stau1	100	91.515	ENSMMUG00000002302	STAU1	100	93.015	Macaca_mulatta
ENSDORG00000030220	Stau1	100	91.616	ENSMNEG00000033821	STAU1	99	91.515	Macaca_nemestrina
ENSDORG00000030220	Stau1	100	91.616	ENSMLEG00000031383	STAU1	85	91.616	Mandrillus_leucophaeus
ENSDORG00000030220	Stau1	99	74.082	ENSMAMG00000017586	stau1	74	74.082	Mastacembelus_armatus
ENSDORG00000030220	Stau1	99	72.267	ENSMZEG00005015605	stau1	82	72.267	Maylandia_zebra
ENSDORG00000030220	Stau1	99	84.521	ENSMGAG00000004719	STAU1	69	84.521	Meleagris_gallopavo
ENSDORG00000030220	Stau1	100	87.677	ENSMAUG00000013846	Stau1	100	87.677	Mesocricetus_auratus
ENSDORG00000030220	Stau1	100	90.505	ENSMICG00000001995	STAU1	85	90.505	Microcebus_murinus
ENSDORG00000030220	Stau1	100	88.889	ENSMOCG00000018743	Stau1	100	88.889	Microtus_ochrogaster
ENSDORG00000030220	Stau1	100	71.224	ENSMMOG00000015455	stau1	98	71.690	Mola_mola
ENSDORG00000030220	Stau1	100	87.117	ENSMODG00000016276	STAU1	84	87.117	Monodelphis_domestica
ENSDORG00000030220	Stau1	99	72.874	ENSMALG00000000045	stau1	71	72.874	Monopterus_albus
ENSDORG00000030220	Stau1	100	87.935	MGP_CAROLIEiJ_G0024699	Stau1	100	87.935	Mus_caroli
ENSDORG00000030220	Stau1	100	87.321	ENSMUSG00000039536	Stau1	100	87.321	Mus_musculus
ENSDORG00000030220	Stau1	100	87.526	MGP_PahariEiJ_G0026141	Stau1	100	87.526	Mus_pahari
ENSDORG00000030220	Stau1	100	87.117	MGP_SPRETEiJ_G0025619	Stau1	100	87.117	Mus_spretus
ENSDORG00000030220	Stau1	99	90.928	ENSMPUG00000017581	STAU1	83	90.928	Mustela_putorius_furo
ENSDORG00000030220	Stau1	100	89.980	ENSMLUG00000008407	STAU1	83	89.980	Myotis_lucifugus
ENSDORG00000030220	Stau1	100	89.899	ENSNGAG00000007108	Stau1	100	89.899	Nannospalax_galili
ENSDORG00000030220	Stau1	99	72.470	ENSNBRG00000017596	stau1	71	72.470	Neolamprologus_brichardi
ENSDORG00000030220	Stau1	100	91.002	ENSNLEG00000006955	STAU1	99	90.909	Nomascus_leucogenys
ENSDORG00000030220	Stau1	94	87.013	ENSMEUG00000003263	STAU1	80	87.013	Notamacropus_eugenii
ENSDORG00000030220	Stau1	100	89.592	ENSOPRG00000014569	STAU1	86	89.592	Ochotona_princeps
ENSDORG00000030220	Stau1	100	91.616	ENSODEG00000006523	STAU1	99	92.025	Octodon_degus
ENSDORG00000030220	Stau1	99	72.470	ENSONIG00000004152	stau1	68	72.470	Oreochromis_niloticus
ENSDORG00000030220	Stau1	99	83.740	ENSOANG00000006394	STAU1	70	83.740	Ornithorhynchus_anatinus
ENSDORG00000030220	Stau1	100	90.798	ENSOCUG00000006214	STAU1	85	90.798	Oryctolagus_cuniculus
ENSDORG00000030220	Stau1	99	71.020	ENSOMEG00000002388	stau1	71	71.020	Oryzias_melastigma
ENSDORG00000030220	Stau1	100	90.389	ENSOGAG00000002127	STAU1	83	90.389	Otolemur_garnettii
ENSDORG00000030220	Stau1	100	61.866	ENSOGAG00000028222	-	98	61.866	Otolemur_garnettii
ENSDORG00000030220	Stau1	100	89.980	ENSOARG00000012204	STAU1	83	89.980	Ovis_aries
ENSDORG00000030220	Stau1	100	91.313	ENSPPAG00000032023	STAU1	99	91.313	Pan_paniscus
ENSDORG00000030220	Stau1	100	91.207	ENSPPRG00000003436	STAU1	99	91.207	Panthera_pardus
ENSDORG00000030220	Stau1	100	91.207	ENSPTIG00000011768	STAU1	99	89.919	Panthera_tigris_altaica
ENSDORG00000030220	Stau1	100	91.313	ENSPTRG00000023130	STAU1	99	91.313	Pan_troglodytes
ENSDORG00000030220	Stau1	100	91.820	ENSPANG00000020560	STAU1	99	86.089	Papio_anubis
ENSDORG00000030220	Stau1	99	72.470	ENSPKIG00000024588	stau1	71	72.470	Paramormyrops_kingsleyae
ENSDORG00000030220	Stau1	99	83.539	ENSPSIG00000010731	STAU1	70	83.539	Pelodiscus_sinensis
ENSDORG00000030220	Stau1	99	73.428	ENSPMGG00000018553	stau1	98	70.637	Periophthalmus_magnuspinnatus
ENSDORG00000030220	Stau1	100	87.677	ENSPEMG00000022045	Stau1	100	87.677	Peromyscus_maniculatus_bairdii
ENSDORG00000030220	Stau1	100	87.117	ENSPCIG00000023269	STAU1	99	82.618	Phascolarctos_cinereus
ENSDORG00000030220	Stau1	99	72.470	ENSPFOG00000017253	stau1	71	72.470	Poecilia_formosa
ENSDORG00000030220	Stau1	62	67.101	ENSPLAG00000014829	stau1	76	69.055	Poecilia_latipinna
ENSDORG00000030220	Stau1	93	71.645	ENSPMEG00000007495	stau1	67	71.645	Poecilia_mexicana
ENSDORG00000030220	Stau1	99	71.862	ENSPREG00000003477	stau1	71	71.862	Poecilia_reticulata
ENSDORG00000030220	Stau1	100	91.207	ENSPPYG00000011111	STAU1	85	91.207	Pongo_abelii
ENSDORG00000030220	Stau1	93	80.921	ENSPCAG00000002459	STAU1	84	80.921	Procavia_capensis
ENSDORG00000030220	Stau1	100	90.593	ENSPCOG00000027746	STAU1	99	90.505	Propithecus_coquereli
ENSDORG00000030220	Stau1	84	93.519	ENSPVAG00000015019	STAU1	71	93.519	Pteropus_vampyrus
ENSDORG00000030220	Stau1	99	72.470	ENSPNYG00000014436	stau1	71	72.470	Pundamilia_nyererei
ENSDORG00000030220	Stau1	99	71.227	ENSPNAG00000011323	stau1	77	71.227	Pygocentrus_nattereri
ENSDORG00000030220	Stau1	100	88.081	ENSRNOG00000007781	Stau1	100	88.081	Rattus_norvegicus
ENSDORG00000030220	Stau1	100	91.515	ENSRBIG00000037345	STAU1	99	91.515	Rhinopithecus_bieti
ENSDORG00000030220	Stau1	100	91.616	ENSRROG00000039008	STAU1	99	90.854	Rhinopithecus_roxellana
ENSDORG00000030220	Stau1	100	91.002	ENSSBOG00000034448	STAU1	99	86.912	Saimiri_boliviensis_boliviensis
ENSDORG00000030220	Stau1	100	87.117	ENSSHAG00000009492	STAU1	84	87.117	Sarcophilus_harrisii
ENSDORG00000030220	Stau1	99	74.694	ENSSFOG00015021497	stau1	85	71.569	Scleropages_formosus
ENSDORG00000030220	Stau1	99	73.684	ENSSMAG00000017410	stau1	71	73.684	Scophthalmus_maximus
ENSDORG00000030220	Stau1	99	74.089	ENSSDUG00000019439	stau1	71	74.089	Seriola_dumerili
ENSDORG00000030220	Stau1	99	74.089	ENSSLDG00000025040	stau1	71	74.089	Seriola_lalandi_dorsalis
ENSDORG00000030220	Stau1	99	83.740	ENSSPUG00000017983	STAU1	73	83.707	Sphenodon_punctatus
ENSDORG00000030220	Stau1	99	73.887	ENSSPAG00000019275	stau1	71	73.887	Stegastes_partitus
ENSDORG00000030220	Stau1	100	90.798	ENSSSCG00000027444	STAU1	99	90.798	Sus_scrofa
ENSDORG00000030220	Stau1	99	82.927	ENSTGUG00000008784	STAU1	69	82.927	Taeniopygia_guttata
ENSDORG00000030220	Stau1	99	73.265	ENSTRUG00000005837	stau1	70	73.931	Takifugu_rubripes
ENSDORG00000030220	Stau1	99	71.862	ENSTNIG00000014732	stau1	73	71.862	Tetraodon_nigroviridis
ENSDORG00000030220	Stau1	100	76.531	ENSTBEG00000009404	STAU1	85	76.531	Tupaia_belangeri
ENSDORG00000030220	Stau1	94	87.229	ENSTTRG00000004285	STAU1	80	87.229	Tursiops_truncatus
ENSDORG00000030220	Stau1	100	89.315	ENSUAMG00000025449	STAU1	99	89.315	Ursus_americanus
ENSDORG00000030220	Stau1	74	87.871	ENSUMAG00000024475	STAU1	87	87.871	Ursus_maritimus
ENSDORG00000030220	Stau1	100	90.593	ENSVPAG00000001313	STAU1	85	90.593	Vicugna_pacos
ENSDORG00000030220	Stau1	100	89.919	ENSVVUG00000022325	STAU1	84	89.919	Vulpes_vulpes
ENSDORG00000030220	Stau1	99	77.572	ENSXETG00000001783	stau1	70	77.778	Xenopus_tropicalis
ENSDORG00000030220	Stau1	54	68.657	ENSXCOG00000008804	stau1	72	68.662	Xiphophorus_couchianus
ENSDORG00000030220	Stau1	99	72.414	ENSXMAG00000016175	stau1	71	72.414	Xiphophorus_maculatus