EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005000252 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 86187 bases
Position: chrPSZQ01000183.1:124771-210957
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005000644	SpoU_methylase	PF00588.19	6.1e-30	1	1
ENSEASP00005000640	SpoU_methylase	PF00588.19	6.3e-30	1	1
ENSEASP00005000630	SpoU_methylase	PF00588.19	6.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005000761	TARBP1-203	4740	-	ENSEASP00005000644	1579 (aa)	-	-
ENSEAST00005000757	TARBP1-202	4824	-	ENSEASP00005000640	1607 (aa)	-	-
ENSEAST00005000746	TARBP1-201	4872	-	ENSEASP00005000630	1623 (aa)	-	-

Gene Model

Click here to download ENSEASG00005000252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005000252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005000252	TARBP1	99	87.931	ENSG00000059588	TARBP1	99	87.931	Homo_sapiens
ENSEASG00005000252	TARBP1	91	43.762	ENSAPOG00000016419	si:dkey-85a20.4	88	44.300	Acanthochromis_polyacanthus
ENSEASG00005000252	TARBP1	85	89.278	ENSAMEG00000003359	TARBP1	100	89.351	Ailuropoda_melanoleuca
ENSEASG00005000252	TARBP1	91	43.114	ENSATEG00000020266	si:dkey-85a20.4	85	45.070	Anabas_testudineus
ENSEASG00005000252	TARBP1	84	68.321	ENSAPLG00000007666	TARBP1	99	69.512	Anas_platyrhynchos
ENSEASG00005000252	TARBP1	99	58.885	ENSACAG00000001142	TARBP1	99	58.415	Anolis_carolinensis
ENSEASG00005000252	TARBP1	92	85.057	ENSANAG00000022031	TARBP1	99	80.260	Aotus_nancymaae
ENSEASG00005000252	TARBP1	100	87.186	ENSBTAG00000004517	TARBP1	99	87.843	Bos_taurus
ENSEASG00005000252	TARBP1	99	86.700	ENSCJAG00000018155	TARBP1	99	86.700	Callithrix_jacchus
ENSEASG00005000252	TARBP1	89	89.013	ENSCAFG00000011533	TARBP1	100	89.281	Canis_familiaris
ENSEASG00005000252	TARBP1	100	87.255	ENSCAFG00020027141	TARBP1	100	88.174	Canis_lupus_dingo
ENSEASG00005000252	TARBP1	99	86.171	ENSCHIG00000011437	TARBP1	99	86.847	Capra_hircus
ENSEASG00005000252	TARBP1	82	86.486	ENSTSYG00000010382	TARBP1	99	86.486	Carlito_syrichta
ENSEASG00005000252	TARBP1	79	69.545	ENSCAPG00000010831	TARBP1	99	69.671	Cavia_aperea
ENSEASG00005000252	TARBP1	99	76.173	ENSCPOG00000013995	TARBP1	99	76.861	Cavia_porcellus
ENSEASG00005000252	TARBP1	99	87.131	ENSCCAG00000037278	TARBP1	99	87.131	Cebus_capucinus
ENSEASG00005000252	TARBP1	99	87.131	ENSCATG00000011754	TARBP1	99	87.562	Cercocebus_atys
ENSEASG00005000252	TARBP1	84	85.000	ENSCLAG00000003655	TARBP1	99	85.000	Chinchilla_lanigera
ENSEASG00005000252	TARBP1	80	87.928	ENSCSAG00000010100	TARBP1	99	88.240	Chlorocebus_sabaeus
ENSEASG00005000252	TARBP1	94	67.039	ENSCPBG00000005587	TARBP1	97	70.122	Chrysemys_picta_bellii
ENSEASG00005000252	TARBP1	85	87.968	ENSCANG00000034343	TARBP1	99	88.188	Colobus_angolensis_palliatus
ENSEASG00005000252	TARBP1	99	76.152	ENSCGRG00001016690	Tarbp1	99	75.903	Cricetulus_griseus_chok1gshd
ENSEASG00005000252	TARBP1	90	77.755	ENSCGRG00000016893	Tarbp1	98	76.907	Cricetulus_griseus_crigri
ENSEASG00005000252	TARBP1	99	39.853	ENSCSEG00000005255	si:dkey-85a20.4	99	39.522	Cynoglossus_semilaevis
ENSEASG00005000252	TARBP1	88	45.859	ENSDARG00000079055	si:dkey-85a20.4	99	54.059	Danio_rerio
ENSEASG00005000252	TARBP1	99	85.163	ENSDNOG00000008637	TARBP1	99	85.344	Dasypus_novemcinctus
ENSEASG00005000252	TARBP1	81	75.617	ENSDORG00000007984	Tarbp1	100	75.617	Dipodomys_ordii
ENSEASG00005000252	TARBP1	100	98.829	ENSECAG00000023673	TARBP1	100	98.878	Equus_caballus
ENSEASG00005000252	TARBP1	86	44.515	ENSELUG00000012193	si:dkey-85a20.4	86	44.554	Esox_lucius
ENSEASG00005000252	TARBP1	100	87.454	ENSFCAG00000014183	TARBP1	100	87.638	Felis_catus
ENSEASG00005000252	TARBP1	81	68.966	ENSFALG00000013565	TARBP1	99	68.879	Ficedula_albicollis
ENSEASG00005000252	TARBP1	80	76.623	ENSFDAG00000001308	TARBP1	99	76.794	Fukomys_damarensis
ENSEASG00005000252	TARBP1	99	37.171	ENSFHEG00000007565	si:dkey-85a20.4	95	53.482	Fundulus_heteroclitus
ENSEASG00005000252	TARBP1	84	43.394	ENSGMOG00000004549	si:dkey-85a20.4	98	43.497	Gadus_morhua
ENSEASG00005000252	TARBP1	96	65.091	ENSGALG00000011000	TARBP1	99	65.091	Gallus_gallus
ENSEASG00005000252	TARBP1	99	41.576	ENSGAFG00000007387	si:dkey-85a20.4	85	45.184	Gambusia_affinis
ENSEASG00005000252	TARBP1	86	45.519	ENSGACG00000005865	si:dkey-85a20.4	99	45.339	Gasterosteus_aculeatus
ENSEASG00005000252	TARBP1	92	73.192	ENSGAGG00000012102	TARBP1	99	68.460	Gopherus_agassizii
ENSEASG00005000252	TARBP1	85	85.984	ENSGGOG00000022879	TARBP1	99	85.984	Gorilla_gorilla
ENSEASG00005000252	TARBP1	87	46.446	ENSHBUG00000008877	si:dkey-85a20.4	85	46.624	Haplochromis_burtoni
ENSEASG00005000252	TARBP1	99	78.395	ENSHGLG00000011592	TARBP1	99	78.536	Heterocephalus_glaber_female
ENSEASG00005000252	TARBP1	94	79.670	ENSHGLG00100015169	TARBP1	99	79.075	Heterocephalus_glaber_male
ENSEASG00005000252	TARBP1	99	40.765	ENSIPUG00000005249	si:dkey-85a20.4	84	43.741	Ictalurus_punctatus
ENSEASG00005000252	TARBP1	88	77.827	ENSSTOG00000032291	TARBP1	100	77.843	Ictidomys_tridecemlineatus
ENSEASG00005000252	TARBP1	96	74.331	ENSJJAG00000017840	Tarbp1	99	74.331	Jaculus_jaculus
ENSEASG00005000252	TARBP1	89	46.588	ENSKMAG00000017546	si:dkey-85a20.4	91	46.974	Kryptolebias_marmoratus
ENSEASG00005000252	TARBP1	66	50.403	ENSLBEG00000012132	si:dkey-85a20.4	74	50.538	Labrus_bergylta
ENSEASG00005000252	TARBP1	99	51.718	ENSLACG00000004337	TARBP1	99	51.899	Latimeria_chalumnae
ENSEASG00005000252	TARBP1	99	46.590	ENSLOCG00000016214	si:dkey-85a20.4	100	46.270	Lepisosteus_oculatus
ENSEASG00005000252	TARBP1	96	84.055	ENSLAFG00000011394	TARBP1	100	84.257	Loxodonta_africana
ENSEASG00005000252	TARBP1	99	84.272	ENSMFAG00000041068	TARBP1	99	84.308	Macaca_fascicularis
ENSEASG00005000252	TARBP1	99	84.819	ENSMMUG00000021703	TARBP1	99	85.065	Macaca_mulatta
ENSEASG00005000252	TARBP1	99	87.562	ENSMNEG00000045002	TARBP1	99	87.562	Macaca_nemestrina
ENSEASG00005000252	TARBP1	84	88.513	ENSMLEG00000044182	TARBP1	99	88.513	Mandrillus_leucophaeus
ENSEASG00005000252	TARBP1	96	43.617	ENSMAMG00000021760	si:dkey-85a20.4	92	44.742	Mastacembelus_armatus
ENSEASG00005000252	TARBP1	91	45.080	ENSMZEG00005005751	si:dkey-85a20.4	85	46.554	Maylandia_zebra
ENSEASG00005000252	TARBP1	99	75.654	ENSMAUG00000020968	Tarbp1	99	75.342	Mesocricetus_auratus
ENSEASG00005000252	TARBP1	99	78.317	ENSMICG00000015280	TARBP1	99	78.990	Microcebus_murinus
ENSEASG00005000252	TARBP1	99	74.408	ENSMOCG00000004128	Tarbp1	99	74.159	Microtus_ochrogaster
ENSEASG00005000252	TARBP1	99	41.641	ENSMMOG00000007795	si:dkey-85a20.4	99	41.066	Mola_mola
ENSEASG00005000252	TARBP1	99	72.892	ENSMODG00000008504	TARBP1	100	72.952	Monodelphis_domestica
ENSEASG00005000252	TARBP1	86	44.492	ENSMALG00000002916	si:dkey-85a20.4	85	45.104	Monopterus_albus
ENSEASG00005000252	TARBP1	99	74.019	MGP_CAROLIEiJ_G0031729	Tarbp1	99	73.769	Mus_caroli
ENSEASG00005000252	TARBP1	99	74.081	ENSMUSG00000090290	Tarbp1	99	73.832	Mus_musculus
ENSEASG00005000252	TARBP1	100	73.730	MGP_PahariEiJ_G0023326	Tarbp1	100	73.482	Mus_pahari
ENSEASG00005000252	TARBP1	100	73.821	MGP_SPRETEiJ_G0032846	Tarbp1	100	73.573	Mus_spretus
ENSEASG00005000252	TARBP1	77	87.460	ENSMPUG00000002802	TARBP1	100	87.460	Mustela_putorius_furo
ENSEASG00005000252	TARBP1	85	77.012	ENSMLUG00000002414	TARBP1	100	77.737	Myotis_lucifugus
ENSEASG00005000252	TARBP1	99	87.869	ENSNLEG00000002518	TARBP1	99	87.869	Nomascus_leucogenys
ENSEASG00005000252	TARBP1	68	78.602	ENSMEUG00000011370	-	67	78.602	Notamacropus_eugenii
ENSEASG00005000252	TARBP1	75	87.894	ENSOPRG00000013822	TARBP1	74	87.894	Ochotona_princeps
ENSEASG00005000252	TARBP1	99	74.783	ENSODEG00000005238	TARBP1	99	74.984	Octodon_degus
ENSEASG00005000252	TARBP1	86	46.116	ENSONIG00000009789	si:dkey-85a20.4	99	46.371	Oreochromis_niloticus
ENSEASG00005000252	TARBP1	99	86.490	ENSOCUG00000017418	TARBP1	99	86.171	Oryctolagus_cuniculus
ENSEASG00005000252	TARBP1	99	41.123	ENSORLG00000010529	si:dkey-85a20.4	99	41.244	Oryzias_latipes
ENSEASG00005000252	TARBP1	99	40.843	ENSORLG00020019264	si:dkey-85a20.4	99	40.964	Oryzias_latipes_hni
ENSEASG00005000252	TARBP1	99	40.797	ENSORLG00015003276	si:dkey-85a20.4	99	40.917	Oryzias_latipes_hsok
ENSEASG00005000252	TARBP1	99	84.350	ENSOGAG00000002379	TARBP1	99	84.350	Otolemur_garnettii
ENSEASG00005000252	TARBP1	99	87.543	ENSOARG00000003434	TARBP1	100	87.526	Ovis_aries
ENSEASG00005000252	TARBP1	85	88.360	ENSPPAG00000028097	TARBP1	99	88.653	Pan_paniscus
ENSEASG00005000252	TARBP1	95	87.148	ENSPPRG00000013561	TARBP1	100	82.601	Panthera_pardus
ENSEASG00005000252	TARBP1	84	90.370	ENSPTIG00000009281	TARBP1	100	91.233	Panthera_tigris_altaica
ENSEASG00005000252	TARBP1	99	87.761	ENSPTRG00000002124	TARBP1	99	87.761	Pan_troglodytes
ENSEASG00005000252	TARBP1	99	87.623	ENSPANG00000021933	TARBP1	99	87.623	Papio_anubis
ENSEASG00005000252	TARBP1	99	43.600	ENSPKIG00000016716	si:dkey-85a20.4	88	46.201	Paramormyrops_kingsleyae
ENSEASG00005000252	TARBP1	80	71.151	ENSPSIG00000010699	TARBP1	99	71.151	Pelodiscus_sinensis
ENSEASG00005000252	TARBP1	97	77.219	ENSPEMG00000006888	Tarbp1	100	77.219	Peromyscus_maniculatus_bairdii
ENSEASG00005000252	TARBP1	92	85.922	ENSPCIG00000029710	TARBP1	99	85.922	Phascolarctos_cinereus
ENSEASG00005000252	TARBP1	86	45.236	ENSPFOG00000013020	si:dkey-85a20.4	99	45.307	Poecilia_formosa
ENSEASG00005000252	TARBP1	99	41.986	ENSPLAG00000006044	si:dkey-85a20.4	85	45.621	Poecilia_latipinna
ENSEASG00005000252	TARBP1	99	41.897	ENSPMEG00000017857	si:dkey-85a20.4	85	45.480	Poecilia_mexicana
ENSEASG00005000252	TARBP1	86	45.416	ENSPREG00000022753	si:dkey-85a20.4	85	45.487	Poecilia_reticulata
ENSEASG00005000252	TARBP1	91	88.458	ENSPPYG00000000102	TARBP1	99	88.458	Pongo_abelii
ENSEASG00005000252	TARBP1	87	91.558	ENSPCAG00000004808	TARBP1	85	91.558	Procavia_capensis
ENSEASG00005000252	TARBP1	99	84.904	ENSPCOG00000005666	TARBP1	100	84.942	Propithecus_coquereli
ENSEASG00005000252	TARBP1	99	70.270	ENSPVAG00000014798	TARBP1	99	70.970	Pteropus_vampyrus
ENSEASG00005000252	TARBP1	91	44.064	ENSPNYG00000019135	si:dkey-85a20.4	85	45.312	Pundamilia_nyererei
ENSEASG00005000252	TARBP1	99	70.031	ENSRNOG00000053574	Tarbp1	99	69.720	Rattus_norvegicus
ENSEASG00005000252	TARBP1	99	81.579	ENSRBIG00000043362	TARBP1	99	81.737	Rhinopithecus_bieti
ENSEASG00005000252	TARBP1	99	83.374	ENSRROG00000029527	TARBP1	99	83.805	Rhinopithecus_roxellana
ENSEASG00005000252	TARBP1	89	87.684	ENSSBOG00000034503	TARBP1	99	87.906	Saimiri_boliviensis_boliviensis
ENSEASG00005000252	TARBP1	84	76.571	ENSSHAG00000000013	TARBP1	99	76.571	Sarcophilus_harrisii
ENSEASG00005000252	TARBP1	84	45.369	ENSSFOG00015002660	si:dkey-85a20.4	96	46.592	Scleropages_formosus
ENSEASG00005000252	TARBP1	91	44.713	ENSSMAG00000007081	si:dkey-85a20.4	99	43.060	Scophthalmus_maximus
ENSEASG00005000252	TARBP1	91	43.251	ENSSDUG00000023566	si:dkey-85a20.4	85	44.246	Seriola_dumerili
ENSEASG00005000252	TARBP1	91	44.967	ENSSLDG00000020200	si:dkey-85a20.4	86	46.371	Seriola_lalandi_dorsalis
ENSEASG00005000252	TARBP1	89	88.940	ENSSARG00000012207	TARBP1	89	88.940	Sorex_araneus
ENSEASG00005000252	TARBP1	99	64.670	ENSSPUG00000015364	TARBP1	99	65.209	Sphenodon_punctatus
ENSEASG00005000252	TARBP1	91	44.334	ENSSPAG00000007213	si:dkey-85a20.4	88	44.925	Stegastes_partitus
ENSEASG00005000252	TARBP1	100	88.752	ENSSSCG00000010160	TARBP1	100	88.889	Sus_scrofa
ENSEASG00005000252	TARBP1	81	68.783	ENSTGUG00000010214	TARBP1	100	68.783	Taeniopygia_guttata
ENSEASG00005000252	TARBP1	94	40.195	ENSTNIG00000016586	si:dkey-85a20.4	99	44.902	Tetraodon_nigroviridis
ENSEASG00005000252	TARBP1	92	86.443	ENSTTRG00000008707	TARBP1	95	86.443	Tursiops_truncatus
ENSEASG00005000252	TARBP1	83	88.897	ENSUMAG00000006730	TARBP1	99	89.406	Ursus_maritimus
ENSEASG00005000252	TARBP1	80	93.814	ENSVPAG00000007665	TARBP1	87	93.814	Vicugna_pacos
ENSEASG00005000252	TARBP1	86	89.710	ENSVVUG00000007460	TARBP1	99	88.667	Vulpes_vulpes
ENSEASG00005000252	TARBP1	85	56.090	ENSXETG00000016224	tarbp1	99	56.360	Xenopus_tropicalis
ENSEASG00005000252	TARBP1	79	49.386	ENSXCOG00000011779	si:dkey-85a20.4	93	49.386	Xiphophorus_couchianus
ENSEASG00005000252	TARBP1	65	43.616	ENSXMAG00000009600	si:dkey-85a20.4	100	43.616	Xiphophorus_maculatus