EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005000614 (Gene tree)
Gene ID: -
Gene Symbol: SNAI3
Alias: -
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 5893 bases
Position: chrPSZQ01005586.1:13648023-13653915
Accession: 18411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005000678	zf-C2H2	PF00096.26	1.1e-24	1	4
ENSEASP00005000678	zf-C2H2	PF00096.26	1.1e-24	2	4
ENSEASP00005000678	zf-C2H2	PF00096.26	1.1e-24	3	4
ENSEASP00005000678	zf-C2H2	PF00096.26	1.1e-24	4	4
ENSEASP00005000678	zf-met	PF12874.7	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005000802	SNAI3-201	1188	-	ENSEASP00005000678	304 (aa)	-	UPI0003ACA6CB

Gene Model

Click here to download ENSEASG00005000614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005000614's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005000614	SNAI3	84	38.462	ENSEASG00005004237	-	72	38.462
ENSEASG00005000614	SNAI3	80	39.007	ENSEASG00005004242	-	76	44.186
ENSEASG00005000614	SNAI3	75	41.045	ENSEASG00005014394	-	83	39.333
ENSEASG00005000614	SNAI3	92	40.351	ENSEASG00005004229	-	86	40.698
ENSEASG00005000614	SNAI3	84	41.353	ENSEASG00005004225	-	97	41.353
ENSEASG00005000614	SNAI3	91	37.500	ENSEASG00005022060	-	83	37.500
ENSEASG00005000614	SNAI3	87	45.882	ENSEASG00005004284	-	84	45.882
ENSEASG00005000614	SNAI3	87	39.535	ENSEASG00005004288	-	93	42.857
ENSEASG00005000614	SNAI3	92	38.732	ENSEASG00005004513	-	92	45.631
ENSEASG00005000614	SNAI3	91	36.567	ENSEASG00005005268	ZNF2	63	36.567
ENSEASG00005000614	SNAI3	51	39.130	ENSEASG00005004469	-	73	39.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005000614	SNAI3	87	75.188	ENSG00000185669	SNAI3	91	75.188	Homo_sapiens
ENSEASG00005000614	SNAI3	87	75.188	ENSANAG00000032748	SNAI3	91	75.188	Aotus_nancymaae
ENSEASG00005000614	SNAI3	87	72.285	ENSBTAG00000017528	SNAI3	91	72.285	Bos_taurus
ENSEASG00005000614	SNAI3	87	78.491	ENSCAFG00000029458	SNAI3	91	78.491	Canis_familiaris
ENSEASG00005000614	SNAI3	87	78.868	ENSCAFG00020004719	SNAI3	91	78.868	Canis_lupus_dingo
ENSEASG00005000614	SNAI3	87	71.536	ENSCHIG00000018087	SNAI3	91	71.536	Capra_hircus
ENSEASG00005000614	SNAI3	87	73.962	ENSTSYG00000025594	SNAI3	91	73.962	Carlito_syrichta
ENSEASG00005000614	SNAI3	87	77.068	ENSCATG00000031714	SNAI3	91	77.068	Cercocebus_atys
ENSEASG00005000614	SNAI3	92	74.733	ENSCSAG00000003047	SNAI3	96	74.733	Chlorocebus_sabaeus
ENSEASG00005000614	SNAI3	88	61.765	ENSCPBG00000023474	SNAI3	95	57.092	Chrysemys_picta_bellii
ENSEASG00005000614	SNAI3	87	77.068	ENSCANG00000031124	SNAI3	82	77.068	Colobus_angolensis_palliatus
ENSEASG00005000614	SNAI3	87	67.669	ENSCGRG00001011389	Snai3	91	66.541	Cricetulus_griseus_chok1gshd
ENSEASG00005000614	SNAI3	87	67.669	ENSCGRG00000014932	Snai3	91	66.541	Cricetulus_griseus_crigri
ENSEASG00005000614	SNAI3	67	51.724	ENSDNOG00000035204	-	86	53.695	Dasypus_novemcinctus
ENSEASG00005000614	SNAI3	88	100.000	ENSECAG00000012131	SNAI3	91	100.000	Equus_caballus
ENSEASG00005000614	SNAI3	87	63.774	ENSEEUG00000000841	SNAI3	91	63.774	Erinaceus_europaeus
ENSEASG00005000614	SNAI3	73	57.709	ENSELUG00000018742	-	81	55.556	Esox_lucius
ENSEASG00005000614	SNAI3	86	71.374	ENSFCAG00000043885	SNAI3	89	71.374	Felis_catus
ENSEASG00005000614	SNAI3	95	58.644	ENSGAGG00000023571	SNAI3	100	58.644	Gopherus_agassizii
ENSEASG00005000614	SNAI3	87	75.564	ENSGGOG00000012559	SNAI3	91	75.564	Gorilla_gorilla
ENSEASG00005000614	SNAI3	95	67.128	ENSJJAG00000019934	Snai3	91	71.429	Jaculus_jaculus
ENSEASG00005000614	SNAI3	87	72.830	ENSLAFG00000005117	SNAI3	91	72.830	Loxodonta_africana
ENSEASG00005000614	SNAI3	87	77.068	ENSMFAG00000032064	SNAI3	91	77.068	Macaca_fascicularis
ENSEASG00005000614	SNAI3	87	77.068	ENSMMUG00000008716	SNAI3	91	77.068	Macaca_mulatta
ENSEASG00005000614	SNAI3	94	73.519	ENSMNEG00000045515	SNAI3	99	73.519	Macaca_nemestrina
ENSEASG00005000614	SNAI3	93	73.944	ENSMLEG00000033191	SNAI3	97	73.944	Mandrillus_leucophaeus
ENSEASG00005000614	SNAI3	50	72.258	ENSMAUG00000008119	Snai2	58	72.258	Mesocricetus_auratus
ENSEASG00005000614	SNAI3	87	68.045	ENSMAUG00000001685	Snai3	91	65.414	Mesocricetus_auratus
ENSEASG00005000614	SNAI3	87	68.045	ENSMOCG00000003536	Snai3	91	66.165	Microtus_ochrogaster
ENSEASG00005000614	SNAI3	88	67.537	MGP_CAROLIEiJ_G0031662	Snai3	92	65.299	Mus_caroli
ENSEASG00005000614	SNAI3	88	69.403	ENSMUSG00000006587	Snai3	92	67.164	Mus_musculus
ENSEASG00005000614	SNAI3	88	68.401	MGP_PahariEiJ_G0023260	Snai3	92	65.428	Mus_pahari
ENSEASG00005000614	SNAI3	88	69.403	MGP_SPRETEiJ_G0032780	Snai3	92	67.164	Mus_spretus
ENSEASG00005000614	SNAI3	85	74.903	ENSMPUG00000008104	SNAI3	89	74.903	Mustela_putorius_furo
ENSEASG00005000614	SNAI3	87	68.045	ENSNGAG00000023039	Snai3	91	68.045	Nannospalax_galili
ENSEASG00005000614	SNAI3	87	77.068	ENSNLEG00000000595	SNAI3	91	77.068	Nomascus_leucogenys
ENSEASG00005000614	SNAI3	86	72.624	ENSOGAG00000000419	SNAI3	90	73.764	Otolemur_garnettii
ENSEASG00005000614	SNAI3	87	55.678	ENSOARG00000013069	-	99	55.678	Ovis_aries
ENSEASG00005000614	SNAI3	87	75.188	ENSPPAG00000043301	SNAI3	91	75.188	Pan_paniscus
ENSEASG00005000614	SNAI3	86	70.611	ENSPPRG00000008511	SNAI3	89	70.611	Panthera_pardus
ENSEASG00005000614	SNAI3	87	74.812	ENSPTRG00000008460	SNAI3	91	74.812	Pan_troglodytes
ENSEASG00005000614	SNAI3	87	77.068	ENSPANG00000000509	SNAI3	91	77.068	Papio_anubis
ENSEASG00005000614	SNAI3	52	72.152	ENSPKIG00000007872	SNAI3	54	72.152	Paramormyrops_kingsleyae
ENSEASG00005000614	SNAI3	63	60.500	ENSPKIG00000002254	SNAI2	57	77.536	Paramormyrops_kingsleyae
ENSEASG00005000614	SNAI3	73	63.755	ENSPSIG00000004262	SNAI3	91	63.755	Pelodiscus_sinensis
ENSEASG00005000614	SNAI3	87	76.692	ENSPPYG00000007643	SNAI3	91	76.692	Pongo_abelii
ENSEASG00005000614	SNAI3	88	67.164	ENSRNOG00000013586	Snai3	92	64.925	Rattus_norvegicus
ENSEASG00005000614	SNAI3	87	75.940	ENSRBIG00000025770	SNAI3	91	75.940	Rhinopithecus_bieti
ENSEASG00005000614	SNAI3	87	75.564	ENSRROG00000032757	SNAI3	91	75.564	Rhinopithecus_roxellana
ENSEASG00005000614	SNAI3	61	63.043	ENSSFOG00015016115	snai3	51	68.485	Scleropages_formosus
ENSEASG00005000614	SNAI3	60	62.032	ENSSFOG00015018025	SNAI2	51	77.536	Scleropages_formosus
ENSEASG00005000614	SNAI3	87	74.060	ENSTTRG00000006262	SNAI3	90	74.060	Tursiops_truncatus
ENSEASG00005000614	SNAI3	87	78.113	ENSUAMG00000020030	SNAI3	91	78.113	Ursus_americanus
ENSEASG00005000614	SNAI3	87	78.113	ENSVVUG00000003233	SNAI3	91	78.113	Vulpes_vulpes