EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005000678 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 30161 bases
Position: chrPSZQ01006753.1:8581412-8611572
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005000766	MMR_HSR1	PF01926.23	3.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005000895	LSG1-201	1980	-	ENSEASP00005000766	659 (aa)	-	-

Gene Model

Click here to download ENSEASG00005000678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005000678's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005000678	LSG1	100	85.888	ENSG00000041802	LSG1	98	91.379	Homo_sapiens
ENSEASG00005000678	LSG1	99	64.297	ENSAPOG00000009694	lsg1	99	63.473	Acanthochromis_polyacanthus
ENSEASG00005000678	LSG1	99	84.067	ENSAMEG00000009343	LSG1	99	84.067	Ailuropoda_melanoleuca
ENSEASG00005000678	LSG1	98	64.506	ENSACIG00000012406	lsg1	99	64.599	Amphilophus_citrinellus
ENSEASG00005000678	LSG1	99	64.145	ENSAOCG00000016066	lsg1	99	64.448	Amphiprion_ocellaris
ENSEASG00005000678	LSG1	99	63.994	ENSAPEG00000003252	lsg1	99	63.528	Amphiprion_percula
ENSEASG00005000678	LSG1	98	65.902	ENSATEG00000011794	lsg1	99	65.611	Anabas_testudineus
ENSEASG00005000678	LSG1	95	65.769	ENSACAG00000004222	LSG1	99	64.715	Anolis_carolinensis
ENSEASG00005000678	LSG1	100	86.798	ENSANAG00000021153	LSG1	100	86.798	Aotus_nancymaae
ENSEASG00005000678	LSG1	99	63.772	ENSACLG00000000520	lsg1	99	62.261	Astatotilapia_calliptera
ENSEASG00005000678	LSG1	99	62.819	ENSAMXG00000008271	lsg1	99	61.752	Astyanax_mexicanus
ENSEASG00005000678	LSG1	100	84.219	ENSBTAG00000008461	LSG1	100	85.432	Bos_taurus
ENSEASG00005000678	LSG1	62	50.254	WBGene00016907	C53H9.2	89	50.254	Caenorhabditis_elegans
ENSEASG00005000678	LSG1	100	86.495	ENSCJAG00000013962	LSG1	100	86.495	Callithrix_jacchus
ENSEASG00005000678	LSG1	95	85.600	ENSCAFG00000013445	LSG1	99	85.600	Canis_familiaris
ENSEASG00005000678	LSG1	99	84.418	ENSCAFG00020002216	LSG1	99	85.393	Canis_lupus_dingo
ENSEASG00005000678	LSG1	99	84.498	ENSCHIG00000015769	LSG1	99	84.498	Capra_hircus
ENSEASG00005000678	LSG1	100	87.102	ENSTSYG00000001447	LSG1	100	87.102	Carlito_syrichta
ENSEASG00005000678	LSG1	95	76.266	ENSCAPG00000009856	LSG1	100	75.000	Cavia_aperea
ENSEASG00005000678	LSG1	100	85.584	ENSCCAG00000035744	LSG1	100	85.584	Cebus_capucinus
ENSEASG00005000678	LSG1	100	86.495	ENSCATG00000042060	LSG1	100	84.674	Cercocebus_atys
ENSEASG00005000678	LSG1	100	86.950	ENSCSAG00000008796	LSG1	92	86.950	Chlorocebus_sabaeus
ENSEASG00005000678	LSG1	99	69.894	ENSCPBG00000015941	LSG1	83	69.894	Chrysemys_picta_bellii
ENSEASG00005000678	LSG1	72	63.684	ENSCING00000007079	-	99	63.684	Ciona_intestinalis
ENSEASG00005000678	LSG1	67	63.265	ENSCSAVG00000002514	-	89	63.265	Ciona_savignyi
ENSEASG00005000678	LSG1	100	86.191	ENSCANG00000030709	LSG1	100	86.191	Colobus_angolensis_palliatus
ENSEASG00005000678	LSG1	100	84.091	ENSCGRG00001019846	Lsg1	100	84.091	Cricetulus_griseus_chok1gshd
ENSEASG00005000678	LSG1	100	84.091	ENSCGRG00000014617	Lsg1	100	84.091	Cricetulus_griseus_crigri
ENSEASG00005000678	LSG1	98	63.846	ENSCSEG00000008522	lsg1	99	62.930	Cynoglossus_semilaevis
ENSEASG00005000678	LSG1	97	65.895	ENSCVAG00000002484	lsg1	99	66.265	Cyprinodon_variegatus
ENSEASG00005000678	LSG1	99	66.313	ENSDARG00000015352	lsg1	99	66.161	Danio_rerio
ENSEASG00005000678	LSG1	100	86.103	ENSDNOG00000006224	LSG1	100	85.801	Dasypus_novemcinctus
ENSEASG00005000678	LSG1	84	58.678	FBgn0266284	Ns3	93	57.198	Drosophila_melanogaster
ENSEASG00005000678	LSG1	88	88.000	ENSETEG00000003888	LSG1	89	88.000	Echinops_telfairi
ENSEASG00005000678	LSG1	88	56.879	ENSEBUG00000003119	lsg1	85	56.711	Eptatretus_burgeri
ENSEASG00005000678	LSG1	100	98.938	ENSECAG00000017659	LSG1	100	98.938	Equus_caballus
ENSEASG00005000678	LSG1	87	84.483	ENSEEUG00000015217	LSG1	87	84.483	Erinaceus_europaeus
ENSEASG00005000678	LSG1	99	61.934	ENSELUG00000023973	lsg1	99	61.631	Esox_lucius
ENSEASG00005000678	LSG1	99	88.602	ENSFCAG00000024957	LSG1	99	88.602	Felis_catus
ENSEASG00005000678	LSG1	99	64.679	ENSFALG00000007210	LSG1	94	67.374	Ficedula_albicollis
ENSEASG00005000678	LSG1	100	78.614	ENSFDAG00000017373	LSG1	100	78.614	Fukomys_damarensis
ENSEASG00005000678	LSG1	97	63.721	ENSFHEG00000003680	lsg1	99	64.199	Fundulus_heteroclitus
ENSEASG00005000678	LSG1	81	71.849	ENSGMOG00000015834	lsg1	87	70.238	Gadus_morhua
ENSEASG00005000678	LSG1	99	65.507	ENSGALG00000007058	LSG1	87	65.204	Gallus_gallus
ENSEASG00005000678	LSG1	97	64.861	ENSGAFG00000015831	lsg1	99	64.286	Gambusia_affinis
ENSEASG00005000678	LSG1	98	63.206	ENSGACG00000009323	lsg1	99	61.799	Gasterosteus_aculeatus
ENSEASG00005000678	LSG1	100	86.343	ENSGGOG00000000520	LSG1	100	86.343	Gorilla_gorilla
ENSEASG00005000678	LSG1	99	63.433	ENSHBUG00000005659	lsg1	99	63.001	Haplochromis_burtoni
ENSEASG00005000678	LSG1	100	76.541	ENSHGLG00000017390	LSG1	100	75.753	Heterocephalus_glaber_female
ENSEASG00005000678	LSG1	100	76.541	ENSHGLG00100018587	LSG1	100	75.753	Heterocephalus_glaber_male
ENSEASG00005000678	LSG1	97	63.158	ENSHCOG00000016848	lsg1	99	62.239	Hippocampus_comes
ENSEASG00005000678	LSG1	99	64.643	ENSIPUG00000008631	lsg1	99	64.947	Ictalurus_punctatus
ENSEASG00005000678	LSG1	80	81.481	ENSSTOG00000010234	LSG1	99	81.673	Ictidomys_tridecemlineatus
ENSEASG00005000678	LSG1	100	80.816	ENSJJAG00000015513	Lsg1	100	80.816	Jaculus_jaculus
ENSEASG00005000678	LSG1	98	63.158	ENSKMAG00000009681	lsg1	99	63.102	Kryptolebias_marmoratus
ENSEASG00005000678	LSG1	99	67.166	ENSLACG00000013399	LSG1	99	66.967	Latimeria_chalumnae
ENSEASG00005000678	LSG1	98	68.210	ENSLOCG00000004918	lsg1	99	67.171	Lepisosteus_oculatus
ENSEASG00005000678	LSG1	100	83.460	ENSLAFG00000012919	-	100	83.460	Loxodonta_africana
ENSEASG00005000678	LSG1	100	86.495	ENSMFAG00000039903	LSG1	100	84.674	Macaca_fascicularis
ENSEASG00005000678	LSG1	100	86.646	ENSMMUG00000010708	LSG1	100	86.646	Macaca_mulatta
ENSEASG00005000678	LSG1	100	86.495	ENSMNEG00000031538	LSG1	100	84.522	Macaca_nemestrina
ENSEASG00005000678	LSG1	100	86.495	ENSMLEG00000041184	LSG1	100	86.495	Mandrillus_leucophaeus
ENSEASG00005000678	LSG1	99	63.229	ENSMAMG00000000470	lsg1	99	63.086	Mastacembelus_armatus
ENSEASG00005000678	LSG1	99	63.582	ENSMZEG00005017865	lsg1	99	63.150	Maylandia_zebra
ENSEASG00005000678	LSG1	89	67.121	ENSMGAG00000007050	LSG1	99	66.780	Meleagris_gallopavo
ENSEASG00005000678	LSG1	96	78.370	ENSMAUG00000016976	Lsg1	98	78.370	Mesocricetus_auratus
ENSEASG00005000678	LSG1	100	85.584	ENSMICG00000049087	LSG1	100	85.584	Microcebus_murinus
ENSEASG00005000678	LSG1	100	81.118	ENSMOCG00000022136	Lsg1	100	80.995	Microtus_ochrogaster
ENSEASG00005000678	LSG1	83	73.510	ENSMMOG00000008884	lsg1	99	71.429	Mola_mola
ENSEASG00005000678	LSG1	99	58.457	ENSMODG00000019828	LSG1	99	57.333	Monodelphis_domestica
ENSEASG00005000678	LSG1	100	81.639	MGP_CAROLIEiJ_G0020648	Lsg1	100	81.639	Mus_caroli
ENSEASG00005000678	LSG1	100	81.942	ENSMUSG00000022538	Lsg1	100	81.942	Mus_musculus
ENSEASG00005000678	LSG1	98	81.664	MGP_PahariEiJ_G0016352	Lsg1	100	82.121	Mus_pahari
ENSEASG00005000678	LSG1	100	81.639	MGP_SPRETEiJ_G0021544	Lsg1	100	81.639	Mus_spretus
ENSEASG00005000678	LSG1	99	85.714	ENSMPUG00000003734	LSG1	99	85.714	Mustela_putorius_furo
ENSEASG00005000678	LSG1	99	88.012	ENSMLUG00000012548	LSG1	99	88.012	Myotis_lucifugus
ENSEASG00005000678	LSG1	100	81.032	ENSNGAG00000021872	Lsg1	100	79.666	Nannospalax_galili
ENSEASG00005000678	LSG1	100	86.950	ENSNLEG00000008293	LSG1	100	86.950	Nomascus_leucogenys
ENSEASG00005000678	LSG1	69	69.359	ENSMEUG00000009041	-	82	69.275	Notamacropus_eugenii
ENSEASG00005000678	LSG1	99	63.827	ENSONIG00000002635	lsg1	99	62.832	Oreochromis_niloticus
ENSEASG00005000678	LSG1	95	73.492	ENSOANG00000012742	LSG1	99	72.540	Ornithorhynchus_anatinus
ENSEASG00005000678	LSG1	100	85.888	ENSOCUG00000004817	LSG1	100	85.435	Oryctolagus_cuniculus
ENSEASG00005000678	LSG1	98	64.496	ENSORLG00000007695	lsg1	99	64.134	Oryzias_latipes
ENSEASG00005000678	LSG1	98	64.031	ENSORLG00020016286	lsg1	99	63.374	Oryzias_latipes_hni
ENSEASG00005000678	LSG1	98	64.186	ENSORLG00015012025	lsg1	99	63.830	Oryzias_latipes_hsok
ENSEASG00005000678	LSG1	98	63.158	ENSOMEG00000022379	lsg1	99	63.198	Oryzias_melastigma
ENSEASG00005000678	LSG1	100	85.520	ENSOGAG00000003475	LSG1	100	85.520	Otolemur_garnettii
ENSEASG00005000678	LSG1	99	84.219	ENSOARG00000020403	LSG1	99	83.612	Ovis_aries
ENSEASG00005000678	LSG1	100	85.888	ENSPPAG00000029271	LSG1	100	85.888	Pan_paniscus
ENSEASG00005000678	LSG1	99	87.068	ENSPPRG00000010281	LSG1	99	87.068	Panthera_pardus
ENSEASG00005000678	LSG1	99	88.298	ENSPTIG00000010789	LSG1	99	88.298	Panthera_tigris_altaica
ENSEASG00005000678	LSG1	100	85.736	ENSPTRG00000015760	LSG1	100	85.736	Pan_troglodytes
ENSEASG00005000678	LSG1	100	86.495	ENSPANG00000018249	LSG1	100	84.674	Papio_anubis
ENSEASG00005000678	LSG1	98	64.087	ENSPKIG00000002895	lsg1	100	63.378	Paramormyrops_kingsleyae
ENSEASG00005000678	LSG1	95	65.827	ENSPSIG00000009821	LSG1	99	65.197	Pelodiscus_sinensis
ENSEASG00005000678	LSG1	95	65.501	ENSPMGG00000000931	lsg1	99	64.286	Periophthalmus_magnuspinnatus
ENSEASG00005000678	LSG1	100	82.326	ENSPEMG00000012082	-	100	81.873	Peromyscus_maniculatus_bairdii
ENSEASG00005000678	LSG1	99	61.218	ENSPMAG00000007451	lsg1	99	60.889	Petromyzon_marinus
ENSEASG00005000678	LSG1	99	67.708	ENSPCIG00000013890	LSG1	82	67.708	Phascolarctos_cinereus
ENSEASG00005000678	LSG1	97	65.438	ENSPFOG00000021882	lsg1	99	65.211	Poecilia_formosa
ENSEASG00005000678	LSG1	97	64.516	ENSPLAG00000019536	lsg1	99	64.468	Poecilia_latipinna
ENSEASG00005000678	LSG1	97	64.625	ENSPMEG00000017281	lsg1	99	64.414	Poecilia_mexicana
ENSEASG00005000678	LSG1	97	55.267	ENSPREG00000006048	lsg1	99	55.589	Poecilia_reticulata
ENSEASG00005000678	LSG1	92	85.033	ENSPPYG00000014425	LSG1	100	83.882	Pongo_abelii
ENSEASG00005000678	LSG1	90	89.333	ENSPCAG00000005511	LSG1	90	89.333	Procavia_capensis
ENSEASG00005000678	LSG1	100	86.950	ENSPCOG00000012360	LSG1	100	86.950	Propithecus_coquereli
ENSEASG00005000678	LSG1	99	63.623	ENSPNYG00000021994	lsg1	99	62.115	Pundamilia_nyererei
ENSEASG00005000678	LSG1	99	65.766	ENSPNAG00000015533	lsg1	99	65.356	Pygocentrus_nattereri
ENSEASG00005000678	LSG1	100	82.655	ENSRNOG00000001727	Lsg1	100	82.655	Rattus_norvegicus
ENSEASG00005000678	LSG1	100	86.039	ENSRBIG00000029053	LSG1	100	86.039	Rhinopithecus_bieti
ENSEASG00005000678	LSG1	100	86.039	ENSRROG00000037702	LSG1	100	86.039	Rhinopithecus_roxellana
ENSEASG00005000678	LSG1	62	58.683	YGL099W	LSG1	68	58.683	Saccharomyces_cerevisiae
ENSEASG00005000678	LSG1	100	86.646	ENSSBOG00000034938	LSG1	100	86.646	Saimiri_boliviensis_boliviensis
ENSEASG00005000678	LSG1	78	66.292	ENSSHAG00000003487	LSG1	99	65.299	Sarcophilus_harrisii
ENSEASG00005000678	LSG1	98	65.639	ENSSFOG00015008955	lsg1	99	64.955	Scleropages_formosus
ENSEASG00005000678	LSG1	98	64.787	ENSSDUG00000004622	lsg1	99	65.172	Seriola_dumerili
ENSEASG00005000678	LSG1	98	64.769	ENSSLDG00000010869	lsg1	99	65.099	Seriola_lalandi_dorsalis
ENSEASG00005000678	LSG1	81	82.991	ENSSARG00000012981	LSG1	81	82.991	Sorex_araneus
ENSEASG00005000678	LSG1	99	68.806	ENSSPUG00000016347	LSG1	99	68.358	Sphenodon_punctatus
ENSEASG00005000678	LSG1	99	63.238	ENSSPAG00000005508	lsg1	99	63.843	Stegastes_partitus
ENSEASG00005000678	LSG1	99	84.954	ENSSSCG00000011827	LSG1	99	84.347	Sus_scrofa
ENSEASG00005000678	LSG1	89	66.050	ENSTGUG00000009068	LSG1	99	65.210	Taeniopygia_guttata
ENSEASG00005000678	LSG1	97	61.051	ENSTRUG00000017380	lsg1	99	60.149	Takifugu_rubripes
ENSEASG00005000678	LSG1	97	64.241	ENSTNIG00000015570	lsg1	99	64.468	Tetraodon_nigroviridis
ENSEASG00005000678	LSG1	99	78.907	ENSTTRG00000000559	LSG1	99	77.997	Tursiops_truncatus
ENSEASG00005000678	LSG1	99	85.106	ENSUAMG00000012454	LSG1	99	85.106	Ursus_americanus
ENSEASG00005000678	LSG1	99	85.106	ENSUMAG00000000855	LSG1	99	85.106	Ursus_maritimus
ENSEASG00005000678	LSG1	95	82.080	ENSVPAG00000012400	LSG1	99	81.760	Vicugna_pacos
ENSEASG00005000678	LSG1	95	85.120	ENSVVUG00000008956	LSG1	97	85.120	Vulpes_vulpes
ENSEASG00005000678	LSG1	99	64.970	ENSXETG00000003451	lsg1	99	64.931	Xenopus_tropicalis
ENSEASG00005000678	LSG1	97	64.417	ENSXCOG00000003239	lsg1	99	64.275	Xiphophorus_couchianus
ENSEASG00005000678	LSG1	97	64.386	ENSXMAG00000005536	lsg1	99	63.930	Xiphophorus_maculatus