EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005000683 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 3811 bases
Position: chrPSZQ01000957.1:2721375-2725185
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005000773	MMR_HSR1	PF01926.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005000899	-	822	-	ENSEASP00005000770	273 (aa)	-	-
ENSEAST00005000902	-	612	-	ENSEASP00005000773	203 (aa)	-	UPI0001FB1A86

Gene Model

Click here to download ENSEASG00005000683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005000683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005000683	-	91	36.702	ENSEASG00005023252	RAB22A	97	36.702
ENSEASG00005000683	-	81	44.242	ENSEASG00005021919	RAB14	77	44.242
ENSEASG00005000683	-	58	31.405	ENSEASG00005019793	ARL14	62	31.405
ENSEASG00005000683	-	91	55.135	ENSEASG00005007298	RAB1A	90	55.135
ENSEASG00005000683	-	89	45.856	ENSEASG00005012754	RAB30	89	45.856
ENSEASG00005000683	-	78	43.038	ENSEASG00005017944	RAB6A	76	43.038
ENSEASG00005000683	-	88	38.947	ENSEASG00005009898	RAB34	73	38.947
ENSEASG00005000683	-	80	46.012	ENSEASG00005003708	-	75	46.012
ENSEASG00005000683	-	78	39.506	ENSEASG00005019924	RAB36	52	39.506
ENSEASG00005000683	-	79	37.423	ENSEASG00005003778	MRAS	78	37.423
ENSEASG00005000683	-	95	37.500	ENSEASG00005009281	RAB5C	89	37.500
ENSEASG00005000683	-	86	46.629	ENSEASG00005016822	RAB39B	84	46.629
ENSEASG00005000683	-	67	31.618	ENSEASG00005000663	ARF4	76	31.618
ENSEASG00005000683	-	99	33.333	ENSEASG00005014613	RERG	99	33.333
ENSEASG00005000683	-	79	40.123	ENSEASG00005013898	KRAS	85	40.123
ENSEASG00005000683	-	78	30.380	ENSEASG00005008239	-	69	30.380
ENSEASG00005000683	-	79	38.272	ENSEASG00005006279	NRAS	85	38.272
ENSEASG00005000683	-	80	40.476	ENSEASG00005002563	RAB9B	83	40.476
ENSEASG00005000683	-	80	38.824	ENSEASG00005016494	RAB9A	83	38.824
ENSEASG00005000683	-	87	42.781	ENSEASG00005007682	RAB33A	79	42.781
ENSEASG00005000683	-	83	30.114	ENSEASG00005010598	DNAJC27	64	30.114
ENSEASG00005000683	-	79	38.889	ENSEASG00005001110	-	85	38.889
ENSEASG00005000683	-	84	53.529	ENSEASG00005008666	RAB15	80	53.529
ENSEASG00005000683	-	84	51.744	ENSEASG00005002926	RAB12	59	51.744
ENSEASG00005000683	-	83	41.379	ENSEASG00005007864	RAB33B	76	41.379
ENSEASG00005000683	-	77	49.045	ENSEASG00005011485	RAB2B	81	49.045
ENSEASG00005000683	-	81	38.788	ENSEASG00005003529	RAB23	69	38.788
ENSEASG00005000683	-	66	46.667	ENSEASG00005019032	-	82	46.667
ENSEASG00005000683	-	95	39.583	ENSEASG00005005818	RAB5A	89	39.583
ENSEASG00005000683	-	81	47.273	ENSEASG00005006431	RAB11A	76	47.273
ENSEASG00005000683	-	91	41.081	ENSEASG00005019133	RAB25	86	41.081
ENSEASG00005000683	-	80	30.000	ENSEASG00005019943	RASL11B	68	30.000
ENSEASG00005000683	-	82	30.058	ENSEASG00005017293	ARL11	91	30.058
ENSEASG00005000683	-	85	31.461	ENSEASG00005001996	RHEB	94	31.461
ENSEASG00005000683	-	86	44.318	ENSEASG00005007164	RAB18	85	44.318
ENSEASG00005000683	-	80	38.323	ENSEASG00005006800	RAB7A	81	38.323
ENSEASG00005000683	-	83	47.929	ENSEASG00005016261	RAB2A	80	47.929
ENSEASG00005000683	-	86	56.000	ENSEASG00005004933	RAB1B	87	56.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005000683	-	100	98.522	ENSG00000143545	RAB13	100	98.522	Homo_sapiens
ENSEASG00005000683	-	99	75.622	ENSACIG00000008584	rab13	97	75.622	Amphilophus_citrinellus
ENSEASG00005000683	-	100	97.044	ENSANAG00000030247	-	100	97.044	Aotus_nancymaae
ENSEASG00005000683	-	99	78.713	ENSAMXG00000030712	rab13	99	78.713	Astyanax_mexicanus
ENSEASG00005000683	-	100	97.044	ENSBTAG00000017604	RAB13	100	97.044	Bos_taurus
ENSEASG00005000683	-	88	44.505	WBGene00019317	K02E10.1	83	44.505	Caenorhabditis_elegans
ENSEASG00005000683	-	100	97.537	ENSCJAG00000009933	-	100	97.537	Callithrix_jacchus
ENSEASG00005000683	-	100	96.552	ENSCHIG00000022271	-	100	96.552	Capra_hircus
ENSEASG00005000683	-	99	91.584	ENSCPOG00000011491	-	99	91.584	Cavia_porcellus
ENSEASG00005000683	-	100	98.030	ENSCCAG00000028502	-	100	98.030	Cebus_capucinus
ENSEASG00005000683	-	100	98.522	ENSCATG00000041779	-	100	98.522	Cercocebus_atys
ENSEASG00005000683	-	100	90.640	ENSCLAG00000006603	-	100	90.640	Chinchilla_lanigera
ENSEASG00005000683	-	100	98.522	ENSCANG00000036573	-	100	98.522	Colobus_angolensis_palliatus
ENSEASG00005000683	-	100	94.581	ENSCGRG00001021505	Rab13	100	94.581	Cricetulus_griseus_chok1gshd
ENSEASG00005000683	-	100	94.581	ENSCGRG00000012126	Rab13	100	94.581	Cricetulus_griseus_crigri
ENSEASG00005000683	-	99	76.238	ENSCSEG00000002358	rab13	99	76.238	Cynoglossus_semilaevis
ENSEASG00005000683	-	99	78.713	ENSDARG00000034771	rab13	99	78.713	Danio_rerio
ENSEASG00005000683	-	100	94.089	ENSDORG00000001591	Rab13	100	94.089	Dipodomys_ordii
ENSEASG00005000683	-	100	100.000	ENSECAG00000016551	RAB13	100	100.000	Equus_caballus
ENSEASG00005000683	-	99	90.594	ENSEEUG00000001233	-	99	90.594	Erinaceus_europaeus
ENSEASG00005000683	-	99	76.733	ENSELUG00000012801	rab13	99	76.733	Esox_lucius
ENSEASG00005000683	-	100	91.626	ENSFCAG00000045269	-	100	91.626	Felis_catus
ENSEASG00005000683	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSEASG00005000683	-	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSEASG00005000683	-	96	78.351	ENSGACG00000011925	rab13	96	78.351	Gasterosteus_aculeatus
ENSEASG00005000683	-	85	90.751	ENSGAGG00000000742	-	99	81.683	Gopherus_agassizii
ENSEASG00005000683	-	100	98.522	ENSGGOG00000023693	RAB13	100	98.522	Gorilla_gorilla
ENSEASG00005000683	-	100	89.655	ENSHGLG00000008749	RAB13	100	89.655	Heterocephalus_glaber_female
ENSEASG00005000683	-	100	89.655	ENSHGLG00100013608	RAB13	100	89.655	Heterocephalus_glaber_male
ENSEASG00005000683	-	99	73.267	ENSHCOG00000007440	rab13	97	84.659	Hippocampus_comes
ENSEASG00005000683	-	99	76.500	ENSIPUG00000003199	rab13	99	76.500	Ictalurus_punctatus
ENSEASG00005000683	-	100	96.059	ENSSTOG00000011222	-	100	96.059	Ictidomys_tridecemlineatus
ENSEASG00005000683	-	100	93.103	ENSJJAG00000010575	Rab13	100	93.103	Jaculus_jaculus
ENSEASG00005000683	-	99	75.000	ENSKMAG00000001908	rab13	97	77.419	Kryptolebias_marmoratus
ENSEASG00005000683	-	99	77.000	ENSLBEG00000026779	rab13	99	77.000	Labrus_bergylta
ENSEASG00005000683	-	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSEASG00005000683	-	100	98.522	ENSMFAG00000041018	RAB13	100	98.522	Macaca_fascicularis
ENSEASG00005000683	-	100	98.522	ENSMNEG00000028951	-	100	98.522	Macaca_nemestrina
ENSEASG00005000683	-	100	98.522	ENSMLEG00000042247	-	100	98.522	Mandrillus_leucophaeus
ENSEASG00005000683	-	99	74.752	ENSMAMG00000014602	rab13	99	74.752	Mastacembelus_armatus
ENSEASG00005000683	-	100	94.581	ENSMAUG00000015713	Rab13	100	94.581	Mesocricetus_auratus
ENSEASG00005000683	-	100	96.552	ENSMICG00000010340	-	100	96.552	Microcebus_murinus
ENSEASG00005000683	-	100	94.581	ENSMOCG00000021448	Rab13	100	94.581	Microtus_ochrogaster
ENSEASG00005000683	-	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSEASG00005000683	-	100	91.626	MGP_CAROLIEiJ_G0025227	Rab13	100	91.626	Mus_caroli
ENSEASG00005000683	-	100	90.640	ENSMUSG00000027935	Rab13	100	90.640	Mus_musculus
ENSEASG00005000683	-	99	91.089	MGP_PahariEiJ_G0026671	Rab13	99	91.089	Mus_pahari
ENSEASG00005000683	-	100	94.581	ENSNGAG00000010309	Rab13	100	94.581	Nannospalax_galili
ENSEASG00005000683	-	99	75.248	ENSNBRG00000004124	rab13	99	75.248	Neolamprologus_brichardi
ENSEASG00005000683	-	100	98.522	ENSNLEG00000028944	-	100	98.522	Nomascus_leucogenys
ENSEASG00005000683	-	100	92.647	ENSMEUG00000009667	-	100	92.647	Notamacropus_eugenii
ENSEASG00005000683	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSEASG00005000683	-	100	89.163	ENSODEG00000010443	-	100	89.163	Octodon_degus
ENSEASG00005000683	-	99	76.238	ENSONIG00000006340	rab13	99	76.238	Oreochromis_niloticus
ENSEASG00005000683	-	88	95.506	ENSOCUG00000006286	-	100	95.506	Oryctolagus_cuniculus
ENSEASG00005000683	-	99	76.238	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSEASG00005000683	-	99	94.059	ENSOGAG00000016969	-	99	94.059	Otolemur_garnettii
ENSEASG00005000683	-	100	98.522	ENSPPAG00000028435	-	100	98.522	Pan_paniscus
ENSEASG00005000683	-	100	91.626	ENSPPRG00000008865	-	100	91.626	Panthera_pardus
ENSEASG00005000683	-	100	98.522	ENSPTRG00000001370	RAB13	100	98.522	Pan_troglodytes
ENSEASG00005000683	-	100	98.522	ENSPANG00000004479	-	100	98.522	Papio_anubis
ENSEASG00005000683	-	99	76.238	ENSPMGG00000007680	rab13	99	76.238	Periophthalmus_magnuspinnatus
ENSEASG00005000683	-	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSEASG00005000683	-	100	93.137	ENSPCIG00000029350	-	100	93.137	Phascolarctos_cinereus
ENSEASG00005000683	-	85	83.815	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSEASG00005000683	-	90	80.328	ENSPREG00000017567	rab13	99	74.257	Poecilia_reticulata
ENSEASG00005000683	-	100	98.522	ENSPPYG00000000790	-	100	98.522	Pongo_abelii
ENSEASG00005000683	-	100	97.537	ENSPCOG00000012189	-	100	97.537	Propithecus_coquereli
ENSEASG00005000683	-	100	94.581	ENSPVAG00000011095	-	100	94.581	Pteropus_vampyrus
ENSEASG00005000683	-	87	84.659	ENSPNAG00000004189	rab13	93	84.659	Pygocentrus_nattereri
ENSEASG00005000683	-	100	92.118	ENSRNOG00000016733	Rab13	100	92.118	Rattus_norvegicus
ENSEASG00005000683	-	100	98.030	ENSRBIG00000008552	-	100	98.030	Rhinopithecus_bieti
ENSEASG00005000683	-	100	98.030	ENSRROG00000036885	-	100	98.030	Rhinopithecus_roxellana
ENSEASG00005000683	-	100	97.537	ENSSBOG00000020342	-	100	97.537	Saimiri_boliviensis_boliviensis
ENSEASG00005000683	-	100	92.647	ENSSHAG00000011866	-	100	92.647	Sarcophilus_harrisii
ENSEASG00005000683	-	100	98.030	ENSSSCG00000006564	-	100	98.030	Sus_scrofa
ENSEASG00005000683	-	99	76.733	ENSTRUG00000024177	rab13	99	76.733	Takifugu_rubripes
ENSEASG00005000683	-	100	96.059	ENSTBEG00000012734	-	100	96.059	Tupaia_belangeri
ENSEASG00005000683	-	100	99.015	ENSTTRG00000011183	-	100	99.015	Tursiops_truncatus
ENSEASG00005000683	-	71	81.944	ENSXETG00000020729	rab13	99	78.882	Xenopus_tropicalis
ENSEASG00005000683	-	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus