EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005000777 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 2582 bases
Position: chrPSZQ01005586.1:13811478-13814059
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005000914	RRM_1	PF00076.22	2.8e-17	1	1
ENSEASP00005000923	RRM_1	PF00076.22	2.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005001054	PABPN1L-201	804	-	ENSEASP00005000914	267 (aa)	-	-
ENSEAST00005001064	PABPN1L-202	813	-	ENSEASP00005000923	270 (aa)	-	-

Gene Model

Click here to download ENSEASG00005000777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005000777's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005000777	PABPN1L	75	48.309	ENSEASG00005011716	PABPN1	72	45.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005000777	PABPN1L	100	69.858	ENSG00000205022	PABPN1L	100	70.922	Homo_sapiens
ENSEASG00005000777	PABPN1L	51	57.143	ENSAPOG00000000685	PABPN1L	58	50.538	Acanthochromis_polyacanthus
ENSEASG00005000777	PABPN1L	58	54.878	ENSACIG00000021400	PABPN1L	92	54.878	Amphilophus_citrinellus
ENSEASG00005000777	PABPN1L	61	50.000	ENSAOCG00000019844	PABPN1L	73	48.500	Amphiprion_ocellaris
ENSEASG00005000777	PABPN1L	61	50.000	ENSAPEG00000019534	PABPN1L	73	48.500	Amphiprion_percula
ENSEASG00005000777	PABPN1L	72	58.163	ENSACAG00000013250	PABPN1L	99	58.163	Anolis_carolinensis
ENSEASG00005000777	PABPN1L	100	67.143	ENSANAG00000038178	PABPN1L	100	68.571	Aotus_nancymaae
ENSEASG00005000777	PABPN1L	71	48.205	ENSACLG00000025147	PABPN1L	72	49.746	Astatotilapia_calliptera
ENSEASG00005000777	PABPN1L	56	56.954	ENSAMXG00000010873	PABPN1L	70	52.381	Astyanax_mexicanus
ENSEASG00005000777	PABPN1L	51	81.560	ENSBTAG00000006727	-	86	82.979	Bos_taurus
ENSEASG00005000777	PABPN1L	100	71.480	ENSBTAG00000023752	-	100	74.368	Bos_taurus
ENSEASG00005000777	PABPN1L	100	65.591	ENSCJAG00000045284	PABPN1L	100	67.857	Callithrix_jacchus
ENSEASG00005000777	PABPN1L	100	71.014	ENSCHIG00000013987	PABPN1L	100	70.877	Capra_hircus
ENSEASG00005000777	PABPN1L	99	68.498	ENSCAPG00000007240	PABPN1L	100	68.864	Cavia_aperea
ENSEASG00005000777	PABPN1L	96	67.045	ENSCPOG00000025951	PABPN1L	100	68.841	Cavia_porcellus
ENSEASG00005000777	PABPN1L	100	66.308	ENSCCAG00000027631	PABPN1L	100	67.742	Cebus_capucinus
ENSEASG00005000777	PABPN1L	100	69.424	ENSCATG00000031060	PABPN1L	100	71.685	Cercocebus_atys
ENSEASG00005000777	PABPN1L	100	69.091	ENSCLAG00000000704	PABPN1L	100	69.818	Chinchilla_lanigera
ENSEASG00005000777	PABPN1L	100	66.441	ENSCSAG00000002881	PABPN1L	100	67.797	Chlorocebus_sabaeus
ENSEASG00005000777	PABPN1L	72	57.868	ENSCPBG00000023441	PABPN1L	61	59.596	Chrysemys_picta_bellii
ENSEASG00005000777	PABPN1L	100	68.817	ENSCANG00000039336	PABPN1L	100	71.429	Colobus_angolensis_palliatus
ENSEASG00005000777	PABPN1L	100	68.705	ENSCGRG00001013211	Pabpn1l	100	68.705	Cricetulus_griseus_chok1gshd
ENSEASG00005000777	PABPN1L	100	68.705	ENSCGRG00000015868	Pabpn1l	100	68.705	Cricetulus_griseus_crigri
ENSEASG00005000777	PABPN1L	57	53.642	ENSCSEG00000001142	pabpn1l	67	51.381	Cynoglossus_semilaevis
ENSEASG00005000777	PABPN1L	61	51.190	ENSCVAG00000015547	PABPN1L	72	49.495	Cyprinodon_variegatus
ENSEASG00005000777	PABPN1L	100	58.845	ENSDNOG00000034677	PABPN1L	100	61.011	Dasypus_novemcinctus
ENSEASG00005000777	PABPN1L	100	97.753	ENSECAG00000000378	PABPN1L	100	97.753	Equus_caballus
ENSEASG00005000777	PABPN1L	100	61.624	ENSEEUG00000004747	PABPN1L	100	61.624	Erinaceus_europaeus
ENSEASG00005000777	PABPN1L	57	53.642	ENSELUG00000018385	PABPN1L	58	55.063	Esox_lucius
ENSEASG00005000777	PABPN1L	100	75.812	ENSFCAG00000010465	PABPN1L	100	76.534	Felis_catus
ENSEASG00005000777	PABPN1L	74	55.882	ENSFALG00000003319	PABPN1L	80	55.882	Ficedula_albicollis
ENSEASG00005000777	PABPN1L	100	68.000	ENSFDAG00000021067	PABPN1L	100	69.091	Fukomys_damarensis
ENSEASG00005000777	PABPN1L	61	51.190	ENSFHEG00000018295	PABPN1L	72	49.495	Fundulus_heteroclitus
ENSEASG00005000777	PABPN1L	54	70.000	ENSGALG00000006242	PABPN1L	85	70.000	Gallus_gallus
ENSEASG00005000777	PABPN1L	61	51.786	ENSGAFG00000012565	PABPN1L	72	50.000	Gambusia_affinis
ENSEASG00005000777	PABPN1L	61	49.080	ENSGACG00000015428	PABPN1L	64	50.282	Gasterosteus_aculeatus
ENSEASG00005000777	PABPN1L	68	58.564	ENSGAGG00000010613	PABPN1L	59	58.564	Gopherus_agassizii
ENSEASG00005000777	PABPN1L	100	69.424	ENSGGOG00000012670	PABPN1L	100	71.685	Gorilla_gorilla
ENSEASG00005000777	PABPN1L	71	48.731	ENSHBUG00000002388	PABPN1L	73	48.731	Haplochromis_burtoni
ENSEASG00005000777	PABPN1L	100	66.423	ENSHGLG00000014207	PABPN1L	100	71.483	Heterocephalus_glaber_female
ENSEASG00005000777	PABPN1L	100	66.423	ENSHGLG00100005230	PABPN1L	100	71.483	Heterocephalus_glaber_male
ENSEASG00005000777	PABPN1L	62	48.235	ENSHCOG00000004151	PABPN1L	73	48.500	Hippocampus_comes
ENSEASG00005000777	PABPN1L	58	54.194	ENSIPUG00000023583	PABPN1L	91	51.351	Ictalurus_punctatus
ENSEASG00005000777	PABPN1L	100	69.892	ENSSTOG00000020814	PABPN1L	100	69.892	Ictidomys_tridecemlineatus
ENSEASG00005000777	PABPN1L	100	68.592	ENSJJAG00000006433	Pabpn1l	100	68.592	Jaculus_jaculus
ENSEASG00005000777	PABPN1L	61	50.595	ENSLBEG00000011647	PABPN1L	60	51.724	Labrus_bergylta
ENSEASG00005000777	PABPN1L	77	63.636	ENSLAFG00000025902	-	78	68.182	Loxodonta_africana
ENSEASG00005000777	PABPN1L	100	70.144	ENSMFAG00000002924	PABPN1L	100	72.401	Macaca_fascicularis
ENSEASG00005000777	PABPN1L	100	68.592	ENSMMUG00000012438	PABPN1L	100	70.863	Macaca_mulatta
ENSEASG00005000777	PABPN1L	100	69.784	ENSMNEG00000044808	PABPN1L	100	72.043	Macaca_nemestrina
ENSEASG00005000777	PABPN1L	100	69.424	ENSMLEG00000032667	PABPN1L	100	71.685	Mandrillus_leucophaeus
ENSEASG00005000777	PABPN1L	71	48.205	ENSMZEG00005002186	PABPN1L	72	49.746	Maylandia_zebra
ENSEASG00005000777	PABPN1L	100	65.568	ENSMAUG00000014032	Pabpn1l	100	65.934	Mesocricetus_auratus
ENSEASG00005000777	PABPN1L	100	69.314	ENSMICG00000028179	PABPN1L	100	70.863	Microcebus_murinus
ENSEASG00005000777	PABPN1L	100	69.343	ENSMOCG00000007955	Pabpn1l	100	69.343	Microtus_ochrogaster
ENSEASG00005000777	PABPN1L	100	51.799	ENSMODG00000003873	-	100	52.688	Monodelphis_domestica
ENSEASG00005000777	PABPN1L	100	64.029	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	64.029	Mus_caroli
ENSEASG00005000777	PABPN1L	100	64.029	ENSMUSG00000069867	Pabpn1l	100	64.029	Mus_musculus
ENSEASG00005000777	PABPN1L	100	64.388	MGP_PahariEiJ_G0023268	Pabpn1l	100	64.388	Mus_pahari
ENSEASG00005000777	PABPN1L	100	64.388	MGP_SPRETEiJ_G0032788	Pabpn1l	100	64.388	Mus_spretus
ENSEASG00005000777	PABPN1L	97	58.303	ENSMLUG00000003228	PABPN1L	95	58.303	Myotis_lucifugus
ENSEASG00005000777	PABPN1L	100	69.091	ENSNGAG00000023992	Pabpn1l	100	69.091	Nannospalax_galili
ENSEASG00005000777	PABPN1L	51	58.333	ENSNBRG00000017078	PABPN1L	74	49.451	Neolamprologus_brichardi
ENSEASG00005000777	PABPN1L	100	70.036	ENSOPRG00000005597	PABPN1L	100	70.036	Ochotona_princeps
ENSEASG00005000777	PABPN1L	98	65.314	ENSODEG00000004649	PABPN1L	100	62.807	Octodon_degus
ENSEASG00005000777	PABPN1L	100	56.985	ENSOANG00000013901	PABPN1L	100	57.348	Ornithorhynchus_anatinus
ENSEASG00005000777	PABPN1L	72	51.295	ENSORLG00000026560	PABPN1L	71	51.295	Oryzias_latipes
ENSEASG00005000777	PABPN1L	72	51.295	ENSORLG00020015068	PABPN1L	71	51.295	Oryzias_latipes_hni
ENSEASG00005000777	PABPN1L	72	51.295	ENSORLG00015000397	PABPN1L	71	51.295	Oryzias_latipes_hsok
ENSEASG00005000777	PABPN1L	72	49.741	ENSOMEG00000017896	PABPN1L	51	49.741	Oryzias_melastigma
ENSEASG00005000777	PABPN1L	100	71.119	ENSOGAG00000000433	PABPN1L	100	71.841	Otolemur_garnettii
ENSEASG00005000777	PABPN1L	100	69.205	ENSOARG00000013682	PABPN1L	100	72.185	Ovis_aries
ENSEASG00005000777	PABPN1L	100	70.213	ENSPPAG00000028866	PABPN1L	100	71.277	Pan_paniscus
ENSEASG00005000777	PABPN1L	100	74.729	ENSPPRG00000015106	PABPN1L	100	75.451	Panthera_pardus
ENSEASG00005000777	PABPN1L	97	65.056	ENSPTIG00000015606	PABPN1L	100	67.829	Panthera_tigris_altaica
ENSEASG00005000777	PABPN1L	100	70.213	ENSPTRG00000031120	PABPN1L	100	71.277	Pan_troglodytes
ENSEASG00005000777	PABPN1L	100	69.784	ENSPANG00000026039	PABPN1L	100	72.043	Papio_anubis
ENSEASG00005000777	PABPN1L	71	55.122	ENSPSIG00000003404	PABPN1L	100	55.122	Pelodiscus_sinensis
ENSEASG00005000777	PABPN1L	100	67.766	ENSPEMG00000016624	Pabpn1l	100	67.766	Peromyscus_maniculatus_bairdii
ENSEASG00005000777	PABPN1L	52	66.667	ENSPCIG00000007038	-	100	66.667	Phascolarctos_cinereus
ENSEASG00005000777	PABPN1L	61	51.786	ENSPFOG00000007001	PABPN1L	89	43.043	Poecilia_formosa
ENSEASG00005000777	PABPN1L	61	51.786	ENSPLAG00000018431	PABPN1L	72	50.000	Poecilia_latipinna
ENSEASG00005000777	PABPN1L	61	51.786	ENSPMEG00000009108	PABPN1L	72	50.000	Poecilia_mexicana
ENSEASG00005000777	PABPN1L	100	68.327	ENSPPYG00000007655	PABPN1L	100	70.567	Pongo_abelii
ENSEASG00005000777	PABPN1L	100	71.583	ENSPCOG00000024077	PABPN1L	100	73.022	Propithecus_coquereli
ENSEASG00005000777	PABPN1L	100	75.714	ENSPVAG00000002716	PABPN1L	100	76.071	Pteropus_vampyrus
ENSEASG00005000777	PABPN1L	71	48.205	ENSPNYG00000004803	PABPN1L	72	49.746	Pundamilia_nyererei
ENSEASG00005000777	PABPN1L	100	66.788	ENSRNOG00000029558	Pabpn1l	100	67.518	Rattus_norvegicus
ENSEASG00005000777	PABPN1L	100	70.504	ENSRBIG00000030740	PABPN1L	100	72.760	Rhinopithecus_bieti
ENSEASG00005000777	PABPN1L	100	70.609	ENSRROG00000032240	-	100	72.043	Rhinopithecus_roxellana
ENSEASG00005000777	PABPN1L	99	70.036	ENSRROG00000035483	-	99	72.302	Rhinopithecus_roxellana
ENSEASG00005000777	PABPN1L	100	66.906	ENSSBOG00000018410	PABPN1L	100	68.345	Saimiri_boliviensis_boliviensis
ENSEASG00005000777	PABPN1L	100	51.408	ENSSHAG00000010001	-	100	51.724	Sarcophilus_harrisii
ENSEASG00005000777	PABPN1L	61	50.000	ENSSMAG00000021348	PABPN1L	69	47.525	Scophthalmus_maximus
ENSEASG00005000777	PABPN1L	61	50.000	ENSSDUG00000006986	PABPN1L	73	48.000	Seriola_dumerili
ENSEASG00005000777	PABPN1L	61	50.595	ENSSLDG00000021845	PABPN1L	73	48.500	Seriola_lalandi_dorsalis
ENSEASG00005000777	PABPN1L	99	51.880	ENSSARG00000005178	-	99	54.118	Sorex_araneus
ENSEASG00005000777	PABPN1L	71	59.391	ENSSPUG00000007031	PABPN1L	84	59.596	Sphenodon_punctatus
ENSEASG00005000777	PABPN1L	71	48.500	ENSSPAG00000017978	PABPN1L	73	49.500	Stegastes_partitus
ENSEASG00005000777	PABPN1L	100	73.260	ENSSSCG00000036367	PABPN1L	100	75.458	Sus_scrofa
ENSEASG00005000777	PABPN1L	61	51.515	ENSTRUG00000024725	PABPN1L	81	49.239	Takifugu_rubripes
ENSEASG00005000777	PABPN1L	100	75.451	ENSTTRG00000004691	PABPN1L	100	76.534	Tursiops_truncatus
ENSEASG00005000777	PABPN1L	58	52.121	ENSXETG00000011258	pabpn1l	92	50.952	Xenopus_tropicalis