EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005001489 (Gene tree)
Gene ID: -
Gene Symbol: NOM1
Alias: C7orf3|PPP1R113|SGD1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 16326 bases
Position: chrPSZQ01006021.1:1894809-1911134
Accession: 13244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005001924	MA3	PF02847.17	2.3e-25	1	1
ENSEASP00005001915	MA3	PF02847.17	2.4e-25	1	1
ENSEASP00005001915	MIF4G	PF02854.19	9.4e-19	1	1
ENSEASP00005001924	MIF4G	PF02854.19	9.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005002127	NOM1-202	2553	-	ENSEASP00005001924	850 (aa)	-	-
ENSEAST00005002118	NOM1-201	2619	-	ENSEASP00005001915	872 (aa)	-	-

Gene Model

Click here to download ENSEASG00005001489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005001489's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005001489	NOM1	100	75.344	ENSG00000146909	NOM1	79	82.991	Homo_sapiens
ENSEASG00005001489	NOM1	61	69.674	ENSAPOG00000012073	nom1	65	67.151	Acanthochromis_polyacanthus
ENSEASG00005001489	NOM1	82	81.092	ENSAMEG00000001412	NOM1	98	80.450	Ailuropoda_melanoleuca
ENSEASG00005001489	NOM1	70	70.115	ENSACIG00000018050	nom1	76	68.073	Amphilophus_citrinellus
ENSEASG00005001489	NOM1	62	67.614	ENSAOCG00000006229	nom1	65	65.880	Amphiprion_ocellaris
ENSEASG00005001489	NOM1	62	67.803	ENSAPEG00000015994	nom1	65	65.946	Amphiprion_percula
ENSEASG00005001489	NOM1	83	60.169	ENSATEG00000005405	nom1	81	62.074	Anabas_testudineus
ENSEASG00005001489	NOM1	76	64.848	ENSAPLG00000006585	NOM1	99	64.414	Anas_platyrhynchos
ENSEASG00005001489	NOM1	81	61.330	ENSACAG00000011192	NOM1	84	62.989	Anolis_carolinensis
ENSEASG00005001489	NOM1	63	67.664	ENSACLG00000000033	nom1	81	60.876	Astatotilapia_calliptera
ENSEASG00005001489	NOM1	61	65.905	ENSAMXG00000041486	nom1	65	63.298	Astyanax_mexicanus
ENSEASG00005001489	NOM1	96	75.152	ENSBTAG00000016435	NOM1	82	77.809	Bos_taurus
ENSEASG00005001489	NOM1	100	75.259	ENSCJAG00000004336	NOM1	82	80.198	Callithrix_jacchus
ENSEASG00005001489	NOM1	56	67.002	ENSCAFG00000029845	-	65	70.958	Canis_familiaris
ENSEASG00005001489	NOM1	96	75.180	ENSCAFG00020005121	NOM1	82	79.774	Canis_lupus_dingo
ENSEASG00005001489	NOM1	95	73.325	ENSCHIG00000020102	NOM1	81	77.569	Capra_hircus
ENSEASG00005001489	NOM1	95	77.751	ENSTSYG00000000227	NOM1	82	83.092	Carlito_syrichta
ENSEASG00005001489	NOM1	62	84.704	ENSCAPG00000016273	NOM1	100	84.704	Cavia_aperea
ENSEASG00005001489	NOM1	96	68.637	ENSCPOG00000025538	NOM1	97	67.888	Cavia_porcellus
ENSEASG00005001489	NOM1	100	62.100	ENSCCAG00000014944	NOM1	100	89.888	Cebus_capucinus
ENSEASG00005001489	NOM1	84	74.895	ENSCLAG00000000267	NOM1	82	75.971	Chinchilla_lanigera
ENSEASG00005001489	NOM1	87	75.564	ENSCPBG00000018215	NOM1	69	75.849	Chrysemys_picta_bellii
ENSEASG00005001489	NOM1	84	35.128	ENSCING00000005248	-	91	36.561	Ciona_intestinalis
ENSEASG00005001489	NOM1	64	85.872	ENSCANG00000041984	NOM1	93	85.872	Colobus_angolensis_palliatus
ENSEASG00005001489	NOM1	99	71.709	ENSCGRG00001020293	Nom1	80	78.166	Cricetulus_griseus_chok1gshd
ENSEASG00005001489	NOM1	62	85.227	ENSCGRG00000005405	Nom1	99	85.227	Cricetulus_griseus_crigri
ENSEASG00005001489	NOM1	74	61.392	ENSCSEG00000000932	nom1	77	60.809	Cynoglossus_semilaevis
ENSEASG00005001489	NOM1	95	54.881	ENSCVAG00000007562	nom1	81	59.682	Cyprinodon_variegatus
ENSEASG00005001489	NOM1	96	53.286	ENSDARG00000060027	nom1	99	68.191	Danio_rerio
ENSEASG00005001489	NOM1	80	66.187	ENSDORG00000015682	Nom1	98	66.520	Dipodomys_ordii
ENSEASG00005001489	NOM1	61	40.000	FBgn0035336	CG9004	79	35.724	Drosophila_melanogaster
ENSEASG00005001489	NOM1	98	60.166	ENSETEG00000003104	NOM1	96	59.759	Echinops_telfairi
ENSEASG00005001489	NOM1	50	51.732	ENSEBUG00000010077	nom1	95	51.732	Eptatretus_burgeri
ENSEASG00005001489	NOM1	100	98.398	ENSECAG00000007596	NOM1	94	98.398	Equus_caballus
ENSEASG00005001489	NOM1	63	66.912	ENSELUG00000006266	nom1	81	59.334	Esox_lucius
ENSEASG00005001489	NOM1	80	63.181	ENSFALG00000006904	NOM1	97	63.864	Ficedula_albicollis
ENSEASG00005001489	NOM1	96	70.531	ENSFDAG00000016241	NOM1	84	75.036	Fukomys_damarensis
ENSEASG00005001489	NOM1	64	66.484	ENSFHEG00000015974	nom1	81	60.882	Fundulus_heteroclitus
ENSEASG00005001489	NOM1	79	56.348	ENSGMOG00000005129	nom1	89	56.421	Gadus_morhua
ENSEASG00005001489	NOM1	99	57.403	ENSGALG00000006437	NOM1	63	69.131	Gallus_gallus
ENSEASG00005001489	NOM1	61	67.754	ENSGAFG00000003211	nom1	81	59.884	Gambusia_affinis
ENSEASG00005001489	NOM1	95	61.825	ENSGAGG00000014347	NOM1	64	76.038	Gopherus_agassizii
ENSEASG00005001489	NOM1	99	76.023	ENSGGOG00000010920	NOM1	73	83.284	Gorilla_gorilla
ENSEASG00005001489	NOM1	63	67.477	ENSHBUG00000014616	nom1	81	61.111	Haplochromis_burtoni
ENSEASG00005001489	NOM1	96	71.612	ENSHGLG00000007392	NOM1	80	76.163	Heterocephalus_glaber_female
ENSEASG00005001489	NOM1	86	86.076	ENSHGLG00100014407	NOM1	77	86.076	Heterocephalus_glaber_male
ENSEASG00005001489	NOM1	64	62.929	ENSIPUG00000013980	nom1	82	58.730	Ictalurus_punctatus
ENSEASG00005001489	NOM1	67	82.716	ENSSTOG00000031736	NOM1	99	83.186	Ictidomys_tridecemlineatus
ENSEASG00005001489	NOM1	58	86.094	ENSJJAG00000011716	Nom1	99	86.094	Jaculus_jaculus
ENSEASG00005001489	NOM1	61	67.593	ENSLBEG00000009252	nom1	82	58.509	Labrus_bergylta
ENSEASG00005001489	NOM1	80	62.020	ENSLACG00000011777	NOM1	82	60.926	Latimeria_chalumnae
ENSEASG00005001489	NOM1	95	55.152	ENSLOCG00000012452	nom1	83	60.767	Lepisosteus_oculatus
ENSEASG00005001489	NOM1	95	71.411	ENSLAFG00000007119	NOM1	98	69.560	Loxodonta_africana
ENSEASG00005001489	NOM1	100	73.769	ENSMMUG00000039033	NOM1	79	77.378	Macaca_mulatta
ENSEASG00005001489	NOM1	62	87.759	ENSMLEG00000037062	NOM1	100	87.759	Mandrillus_leucophaeus
ENSEASG00005001489	NOM1	96	52.852	ENSMAMG00000004118	nom1	63	66.541	Mastacembelus_armatus
ENSEASG00005001489	NOM1	63	67.664	ENSMZEG00005000384	nom1	81	60.876	Maylandia_zebra
ENSEASG00005001489	NOM1	80	63.348	ENSMGAG00000005051	NOM1	97	63.839	Meleagris_gallopavo
ENSEASG00005001489	NOM1	96	73.045	ENSMAUG00000017988	Nom1	84	78.684	Mesocricetus_auratus
ENSEASG00005001489	NOM1	100	76.798	ENSMICG00000017531	NOM1	81	81.871	Microcebus_murinus
ENSEASG00005001489	NOM1	96	72.410	ENSMOCG00000015962	Nom1	79	80.060	Microtus_ochrogaster
ENSEASG00005001489	NOM1	95	53.069	ENSMMOG00000004419	nom1	80	58.419	Mola_mola
ENSEASG00005001489	NOM1	96	68.150	ENSMODG00000005177	NOM1	81	73.615	Monodelphis_domestica
ENSEASG00005001489	NOM1	75	61.212	ENSMALG00000008800	nom1	80	61.250	Monopterus_albus
ENSEASG00005001489	NOM1	96	70.190	MGP_CAROLIEiJ_G0027043	Nom1	79	76.226	Mus_caroli
ENSEASG00005001489	NOM1	96	70.286	ENSMUSG00000001569	Nom1	79	75.632	Mus_musculus
ENSEASG00005001489	NOM1	96	70.322	MGP_SPRETEiJ_G0028039	Nom1	81	75.431	Mus_spretus
ENSEASG00005001489	NOM1	79	75.073	ENSMPUG00000009745	NOM1	99	74.340	Mustela_putorius_furo
ENSEASG00005001489	NOM1	70	80.897	ENSMLUG00000009129	NOM1	88	87.828	Myotis_lucifugus
ENSEASG00005001489	NOM1	96	54.610	ENSNBRG00000016429	nom1	94	68.631	Neolamprologus_brichardi
ENSEASG00005001489	NOM1	100	73.077	ENSNLEG00000000238	NOM1	79	79.476	Nomascus_leucogenys
ENSEASG00005001489	NOM1	68	69.231	ENSMEUG00000001108	NOM1	70	69.231	Notamacropus_eugenii
ENSEASG00005001489	NOM1	90	66.667	ENSOPRG00000014676	NOM1	70	68.192	Ochotona_princeps
ENSEASG00005001489	NOM1	79	76.029	ENSODEG00000009399	NOM1	97	75.628	Octodon_degus
ENSEASG00005001489	NOM1	63	67.290	ENSONIG00000005958	nom1	86	60.438	Oreochromis_niloticus
ENSEASG00005001489	NOM1	54	79.437	ENSOANG00000006139	-	97	79.437	Ornithorhynchus_anatinus
ENSEASG00005001489	NOM1	96	77.751	ENSOCUG00000004071	-	80	83.852	Oryctolagus_cuniculus
ENSEASG00005001489	NOM1	89	72.826	ENSOCUG00000021448	-	83	83.019	Oryctolagus_cuniculus
ENSEASG00005001489	NOM1	94	53.349	ENSORLG00000010541	nom1	83	59.424	Oryzias_latipes
ENSEASG00005001489	NOM1	79	59.254	ENSORLG00020010789	nom1	90	59.254	Oryzias_latipes_hni
ENSEASG00005001489	NOM1	94	53.103	ENSORLG00015010475	nom1	90	59.110	Oryzias_latipes_hsok
ENSEASG00005001489	NOM1	79	59.366	ENSOMEG00000004219	nom1	83	59.169	Oryzias_melastigma
ENSEASG00005001489	NOM1	72	79.475	ENSOGAG00000001124	NOM1	93	83.865	Otolemur_garnettii
ENSEASG00005001489	NOM1	79	76.835	ENSOARG00000007261	NOM1	92	76.990	Ovis_aries
ENSEASG00005001489	NOM1	100	75.344	ENSPPAG00000041374	NOM1	79	82.698	Pan_paniscus
ENSEASG00005001489	NOM1	83	81.543	ENSPTIG00000013532	NOM1	96	81.425	Panthera_tigris_altaica
ENSEASG00005001489	NOM1	100	75.229	ENSPTRG00000019917	NOM1	79	82.991	Pan_troglodytes
ENSEASG00005001489	NOM1	100	77.294	ENSPANG00000007605	NOM1	79	81.385	Papio_anubis
ENSEASG00005001489	NOM1	97	51.231	ENSPKIG00000005825	nom1	82	56.515	Paramormyrops_kingsleyae
ENSEASG00005001489	NOM1	66	73.477	ENSPSIG00000017848	NOM1	93	73.477	Pelodiscus_sinensis
ENSEASG00005001489	NOM1	80	58.705	ENSPMGG00000002577	nom1	81	60.542	Periophthalmus_magnuspinnatus
ENSEASG00005001489	NOM1	96	73.206	ENSPEMG00000024180	Nom1	81	78.993	Peromyscus_maniculatus_bairdii
ENSEASG00005001489	NOM1	98	66.109	ENSPCIG00000027941	NOM1	78	71.693	Phascolarctos_cinereus
ENSEASG00005001489	NOM1	61	69.157	ENSPFOG00000015771	nom1	65	66.910	Poecilia_formosa
ENSEASG00005001489	NOM1	61	69.157	ENSPLAG00000007856	nom1	80	62.312	Poecilia_latipinna
ENSEASG00005001489	NOM1	96	54.765	ENSPMEG00000014155	nom1	81	62.162	Poecilia_mexicana
ENSEASG00005001489	NOM1	95	54.788	ENSPREG00000008850	nom1	81	60.914	Poecilia_reticulata
ENSEASG00005001489	NOM1	100	73.068	ENSPPYG00000018222	NOM1	78	77.246	Pongo_abelii
ENSEASG00005001489	NOM1	93	61.567	ENSPCAG00000000440	NOM1	96	61.769	Procavia_capensis
ENSEASG00005001489	NOM1	62	85.311	ENSPCOG00000015222	NOM1	100	85.311	Propithecus_coquereli
ENSEASG00005001489	NOM1	100	77.639	ENSPVAG00000014760	NOM1	81	81.716	Pteropus_vampyrus
ENSEASG00005001489	NOM1	63	67.290	ENSPNYG00000006975	nom1	97	66.728	Pundamilia_nyererei
ENSEASG00005001489	NOM1	61	65.326	ENSPNAG00000011085	nom1	58	65.326	Pygocentrus_nattereri
ENSEASG00005001489	NOM1	96	68.408	ENSRNOG00000048969	AABR07059041.1	85	71.777	Rattus_norvegicus
ENSEASG00005001489	NOM1	100	76.739	ENSRBIG00000037042	NOM1	79	81.022	Rhinopithecus_bieti
ENSEASG00005001489	NOM1	100	76.625	ENSRROG00000037293	NOM1	79	80.730	Rhinopithecus_roxellana
ENSEASG00005001489	NOM1	84	71.180	ENSSHAG00000017998	-	98	73.599	Sarcophilus_harrisii
ENSEASG00005001489	NOM1	56	64.622	ENSSHAG00000002835	-	99	72.639	Sarcophilus_harrisii
ENSEASG00005001489	NOM1	57	66.183	ENSSFOG00015003196	nom1	99	66.183	Scleropages_formosus
ENSEASG00005001489	NOM1	96	54.064	ENSSMAG00000011047	nom1	81	60.029	Scophthalmus_maximus
ENSEASG00005001489	NOM1	95	54.460	ENSSDUG00000006834	nom1	81	60.522	Seriola_dumerili
ENSEASG00005001489	NOM1	95	53.475	ENSSLDG00000021812	nom1	81	60.317	Seriola_lalandi_dorsalis
ENSEASG00005001489	NOM1	83	57.844	ENSSPUG00000002556	NOM1	89	76.677	Sphenodon_punctatus
ENSEASG00005001489	NOM1	61	69.866	ENSSPAG00000000953	nom1	82	59.661	Stegastes_partitus
ENSEASG00005001489	NOM1	82	62.396	ENSTGUG00000000702	-	97	62.463	Taeniopygia_guttata
ENSEASG00005001489	NOM1	80	59.433	ENSTRUG00000010239	nom1	81	60.411	Takifugu_rubripes
ENSEASG00005001489	NOM1	82	57.345	ENSTNIG00000012783	nom1	82	59.639	Tetraodon_nigroviridis
ENSEASG00005001489	NOM1	98	76.698	ENSTTRG00000009691	NOM1	81	80.560	Tursiops_truncatus
ENSEASG00005001489	NOM1	96	78.401	ENSUAMG00000025450	NOM1	96	77.033	Ursus_americanus
ENSEASG00005001489	NOM1	85	79.333	ENSUMAG00000014275	NOM1	98	81.674	Ursus_maritimus
ENSEASG00005001489	NOM1	96	74.792	ENSVVUG00000002608	NOM1	96	73.887	Vulpes_vulpes
ENSEASG00005001489	NOM1	96	54.123	ENSXETG00000021611	nom1	94	68.511	Xenopus_tropicalis
ENSEASG00005001489	NOM1	95	53.800	ENSXMAG00000002451	nom1	80	61.961	Xiphophorus_maculatus