EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005001625 (Gene tree)
Gene ID: -
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 74843 bases
Position: chrPSZQ01000988.1:5299375-5374217
Accession: 17264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005002059	RNA_pol_Rpb1_5	PF04998.17	3e-103	1	1
ENSEASP00005002059	RNA_pol_Rpb1_4	PF05000.17	2.6e-25	1	1
ENSEASP00005002059	RNA_pol_Rpb1_2	PF00623.20	3.9e-70	1	1
ENSEASP00005002059	RNA_pol_Rpb1_3	PF04983.18	4.1e-36	1	1
ENSEASP00005002059	RNA_pol_Rpb1_1	PF04997.12	2.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005002275	POLR1A-201	5163	-	ENSEASP00005002059	1720 (aa)	-	-

Gene Model

Click here to download ENSEASG00005001625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005001625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005001625	POLR1A	79	39.552	ENSEASG00005019114	-	65	39.552
ENSEASG00005001625	POLR1A	62	33.085	ENSEASG00005023053	POLR3A	70	33.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005001625	POLR1A	100	92.151	ENSG00000068654	POLR1A	100	92.151	Homo_sapiens
ENSEASG00005001625	POLR1A	69	68.350	ENSAPOG00000017945	polr1a	99	68.350	Acanthochromis_polyacanthus
ENSEASG00005001625	POLR1A	100	94.012	ENSAMEG00000005807	POLR1A	100	94.877	Ailuropoda_melanoleuca
ENSEASG00005001625	POLR1A	100	63.636	ENSACIG00000022147	polr1a	100	62.623	Amphilophus_citrinellus
ENSEASG00005001625	POLR1A	100	66.338	ENSAOCG00000017336	polr1a	100	68.803	Amphiprion_ocellaris
ENSEASG00005001625	POLR1A	95	73.611	ENSAPEG00000016105	polr1a	98	73.611	Amphiprion_percula
ENSEASG00005001625	POLR1A	100	65.994	ENSATEG00000016773	polr1a	100	66.089	Anabas_testudineus
ENSEASG00005001625	POLR1A	86	73.103	ENSAPLG00000013871	POLR1A	99	72.900	Anas_platyrhynchos
ENSEASG00005001625	POLR1A	99	69.382	ENSACAG00000012141	POLR1A	99	69.497	Anolis_carolinensis
ENSEASG00005001625	POLR1A	100	90.930	ENSANAG00000033927	POLR1A	100	90.814	Aotus_nancymaae
ENSEASG00005001625	POLR1A	100	62.942	ENSACLG00000020541	polr1a	100	61.866	Astatotilapia_calliptera
ENSEASG00005001625	POLR1A	100	92.326	ENSBTAG00000006481	POLR1A	100	92.326	Bos_taurus
ENSEASG00005001625	POLR1A	97	40.766	WBGene00012999	rpoa-1	98	38.146	Caenorhabditis_elegans
ENSEASG00005001625	POLR1A	100	90.988	ENSCJAG00000019547	POLR1A	100	90.988	Callithrix_jacchus
ENSEASG00005001625	POLR1A	100	93.430	ENSCAFG00000007613	POLR1A	100	93.256	Canis_familiaris
ENSEASG00005001625	POLR1A	100	93.275	ENSCAFG00020014752	POLR1A	100	93.101	Canis_lupus_dingo
ENSEASG00005001625	POLR1A	100	90.324	ENSCHIG00000018204	POLR1A	99	91.920	Capra_hircus
ENSEASG00005001625	POLR1A	100	89.024	ENSTSYG00000002761	POLR1A	100	88.669	Carlito_syrichta
ENSEASG00005001625	POLR1A	97	85.305	ENSCAPG00000010132	POLR1A	100	85.125	Cavia_aperea
ENSEASG00005001625	POLR1A	100	89.954	ENSCPOG00000012350	POLR1A	100	89.779	Cavia_porcellus
ENSEASG00005001625	POLR1A	100	91.163	ENSCCAG00000019839	POLR1A	100	91.163	Cebus_capucinus
ENSEASG00005001625	POLR1A	100	92.442	ENSCATG00000029786	POLR1A	100	92.442	Cercocebus_atys
ENSEASG00005001625	POLR1A	100	90.029	ENSCLAG00000005187	POLR1A	100	89.507	Chinchilla_lanigera
ENSEASG00005001625	POLR1A	100	92.393	ENSCSAG00000016251	POLR1A	100	92.393	Chlorocebus_sabaeus
ENSEASG00005001625	POLR1A	99	74.855	ENSCPBG00000001115	POLR1A	99	75.247	Chrysemys_picta_bellii
ENSEASG00005001625	POLR1A	99	46.561	ENSCSAVG00000007184	-	91	55.211	Ciona_savignyi
ENSEASG00005001625	POLR1A	100	89.134	ENSCANG00000031785	POLR1A	100	89.134	Colobus_angolensis_palliatus
ENSEASG00005001625	POLR1A	100	83.391	ENSCGRG00001006651	Polr1a	100	83.449	Cricetulus_griseus_chok1gshd
ENSEASG00005001625	POLR1A	60	86.957	ENSCGRG00000010834	Polr1a	100	87.053	Cricetulus_griseus_crigri
ENSEASG00005001625	POLR1A	100	61.949	ENSCSEG00000020190	polr1a	100	61.775	Cynoglossus_semilaevis
ENSEASG00005001625	POLR1A	100	64.494	ENSCVAG00000020941	polr1a	100	65.067	Cyprinodon_variegatus
ENSEASG00005001625	POLR1A	100	67.342	ENSDARG00000098375	polr1a	100	67.226	Danio_rerio
ENSEASG00005001625	POLR1A	100	83.942	ENSDNOG00000010829	POLR1A	100	83.536	Dasypus_novemcinctus
ENSEASG00005001625	POLR1A	100	89.358	ENSDORG00000008298	Polr1a	100	88.664	Dipodomys_ordii
ENSEASG00005001625	POLR1A	79	45.249	FBgn0019938	RpI1	99	43.587	Drosophila_melanogaster
ENSEASG00005001625	POLR1A	72	96.875	ENSETEG00000000412	-	72	96.875	Echinops_telfairi
ENSEASG00005001625	POLR1A	89	47.798	ENSEBUG00000005667	-	99	48.160	Eptatretus_burgeri
ENSEASG00005001625	POLR1A	100	99.709	ENSECAG00000010092	POLR1A	100	99.709	Equus_caballus
ENSEASG00005001625	POLR1A	100	99.709	ENSECAG00000036306	-	100	99.709	Equus_caballus
ENSEASG00005001625	POLR1A	100	99.709	ENSECAG00000030510	-	100	99.709	Equus_caballus
ENSEASG00005001625	POLR1A	85	96.809	ENSEEUG00000000676	POLR1A	81	96.667	Erinaceus_europaeus
ENSEASG00005001625	POLR1A	100	67.785	ENSELUG00000012769	polr1a	99	66.380	Esox_lucius
ENSEASG00005001625	POLR1A	100	94.360	ENSFCAG00000008966	POLR1A	100	94.186	Felis_catus
ENSEASG00005001625	POLR1A	99	71.697	ENSFALG00000010082	POLR1A	99	71.112	Ficedula_albicollis
ENSEASG00005001625	POLR1A	100	90.186	ENSFDAG00000013726	POLR1A	100	89.373	Fukomys_damarensis
ENSEASG00005001625	POLR1A	100	61.534	ENSFHEG00000005996	polr1a	100	62.139	Fundulus_heteroclitus
ENSEASG00005001625	POLR1A	100	59.907	ENSGMOG00000002230	polr1a	100	59.757	Gadus_morhua
ENSEASG00005001625	POLR1A	90	70.071	ENSGALG00000038160	-	99	70.071	Gallus_gallus
ENSEASG00005001625	POLR1A	100	65.006	ENSGAFG00000015266	polr1a	100	64.253	Gambusia_affinis
ENSEASG00005001625	POLR1A	100	64.689	ENSGACG00000018791	polr1a	100	64.871	Gasterosteus_aculeatus
ENSEASG00005001625	POLR1A	89	75.693	ENSGAGG00000004984	-	96	81.669	Gopherus_agassizii
ENSEASG00005001625	POLR1A	100	92.035	ENSGGOG00000001788	POLR1A	100	92.035	Gorilla_gorilla
ENSEASG00005001625	POLR1A	90	64.944	ENSHBUG00000020021	polr1a	99	65.308	Haplochromis_burtoni
ENSEASG00005001625	POLR1A	100	90.424	ENSHGLG00000006334	POLR1A	100	90.250	Heterocephalus_glaber_female
ENSEASG00005001625	POLR1A	100	90.162	ENSHGLG00100006614	POLR1A	100	89.988	Heterocephalus_glaber_male
ENSEASG00005001625	POLR1A	100	62.738	ENSHCOG00000003345	polr1a	100	62.681	Hippocampus_comes
ENSEASG00005001625	POLR1A	100	66.589	ENSIPUG00000013174	polr1a	100	65.511	Ictalurus_punctatus
ENSEASG00005001625	POLR1A	100	88.095	ENSSTOG00000012580	POLR1A	100	87.631	Ictidomys_tridecemlineatus
ENSEASG00005001625	POLR1A	100	88.341	ENSJJAG00000013113	Polr1a	100	88.167	Jaculus_jaculus
ENSEASG00005001625	POLR1A	100	65.815	ENSKMAG00000007399	polr1a	100	65.623	Kryptolebias_marmoratus
ENSEASG00005001625	POLR1A	95	68.417	ENSLBEG00000015401	polr1a	99	68.597	Labrus_bergylta
ENSEASG00005001625	POLR1A	53	76.630	ENSLACG00000003218	polr1a	100	76.630	Latimeria_chalumnae
ENSEASG00005001625	POLR1A	100	71.115	ENSLOCG00000010881	polr1a	100	70.768	Lepisosteus_oculatus
ENSEASG00005001625	POLR1A	100	91.204	ENSLAFG00000014948	POLR1A	100	91.262	Loxodonta_africana
ENSEASG00005001625	POLR1A	100	92.384	ENSMFAG00000046097	POLR1A	100	92.384	Macaca_fascicularis
ENSEASG00005001625	POLR1A	100	92.267	ENSMMUG00000015815	POLR1A	100	92.267	Macaca_mulatta
ENSEASG00005001625	POLR1A	100	92.384	ENSMNEG00000043313	POLR1A	100	92.384	Macaca_nemestrina
ENSEASG00005001625	POLR1A	100	91.802	ENSMLEG00000042428	POLR1A	100	91.802	Mandrillus_leucophaeus
ENSEASG00005001625	POLR1A	100	67.053	ENSMAMG00000016565	polr1a	100	65.972	Mastacembelus_armatus
ENSEASG00005001625	POLR1A	100	66.242	ENSMZEG00005004915	polr1a	100	65.453	Maylandia_zebra
ENSEASG00005001625	POLR1A	99	69.664	ENSMGAG00000013111	POLR1A	99	69.722	Meleagris_gallopavo
ENSEASG00005001625	POLR1A	92	87.942	ENSMAUG00000008497	Polr1a	100	87.997	Mesocricetus_auratus
ENSEASG00005001625	POLR1A	100	92.272	ENSMICG00000000757	POLR1A	100	92.272	Microcebus_murinus
ENSEASG00005001625	POLR1A	100	88.477	ENSMOCG00000000122	Polr1a	100	87.898	Microtus_ochrogaster
ENSEASG00005001625	POLR1A	100	65.333	ENSMMOG00000010216	polr1a	100	65.449	Mola_mola
ENSEASG00005001625	POLR1A	100	75.604	ENSMODG00000009335	POLR1A	100	75.489	Monodelphis_domestica
ENSEASG00005001625	POLR1A	100	65.603	ENSMALG00000013363	polr1a	100	65.587	Monopterus_albus
ENSEASG00005001625	POLR1A	100	87.030	MGP_CAROLIEiJ_G0028494	Polr1a	100	86.624	Mus_caroli
ENSEASG00005001625	POLR1A	100	87.087	ENSMUSG00000049553	Polr1a	100	86.624	Mus_musculus
ENSEASG00005001625	POLR1A	100	87.666	MGP_PahariEiJ_G0022230	Polr1a	100	87.261	Mus_pahari
ENSEASG00005001625	POLR1A	100	85.731	MGP_SPRETEiJ_G0029499	Polr1a	100	85.959	Mus_spretus
ENSEASG00005001625	POLR1A	100	93.488	ENSMPUG00000009135	POLR1A	100	93.314	Mustela_putorius_furo
ENSEASG00005001625	POLR1A	100	91.151	ENSMLUG00000015723	POLR1A	100	90.804	Myotis_lucifugus
ENSEASG00005001625	POLR1A	100	89.120	ENSNGAG00000017907	Polr1a	100	88.657	Nannospalax_galili
ENSEASG00005001625	POLR1A	100	66.068	ENSNBRG00000000519	polr1a	100	65.511	Neolamprologus_brichardi
ENSEASG00005001625	POLR1A	100	90.104	ENSNLEG00000002264	POLR1A	100	90.104	Nomascus_leucogenys
ENSEASG00005001625	POLR1A	75	92.913	ENSMEUG00000011665	-	75	92.913	Notamacropus_eugenii
ENSEASG00005001625	POLR1A	99	83.284	ENSOPRG00000008269	POLR1A	100	83.167	Ochotona_princeps
ENSEASG00005001625	POLR1A	100	90.476	ENSODEG00000003542	POLR1A	100	89.954	Octodon_degus
ENSEASG00005001625	POLR1A	100	66.358	ENSONIG00000015895	polr1a	100	66.031	Oreochromis_niloticus
ENSEASG00005001625	POLR1A	100	91.226	ENSOCUG00000010138	POLR1A	100	91.226	Oryctolagus_cuniculus
ENSEASG00005001625	POLR1A	100	65.084	ENSORLG00000008753	polr1a	99	65.006	Oryzias_latipes
ENSEASG00005001625	POLR1A	100	64.273	ENSORLG00020020726	polr1a	99	64.021	Oryzias_latipes_hni
ENSEASG00005001625	POLR1A	96	75.532	ENSORLG00015016071	polr1a	99	75.556	Oryzias_latipes_hsok
ENSEASG00005001625	POLR1A	100	90.988	ENSOGAG00000004031	POLR1A	100	90.988	Otolemur_garnettii
ENSEASG00005001625	POLR1A	100	91.812	ENSOARG00000020601	POLR1A	100	92.058	Ovis_aries
ENSEASG00005001625	POLR1A	100	91.860	ENSPPAG00000042450	POLR1A	100	91.860	Pan_paniscus
ENSEASG00005001625	POLR1A	100	94.826	ENSPPRG00000006702	POLR1A	100	94.477	Panthera_pardus
ENSEASG00005001625	POLR1A	100	94.148	ENSPTIG00000018783	POLR1A	100	94.032	Panthera_tigris_altaica
ENSEASG00005001625	POLR1A	100	91.802	ENSPTRG00000012147	POLR1A	100	91.802	Pan_troglodytes
ENSEASG00005001625	POLR1A	100	92.326	ENSPANG00000025908	POLR1A	100	92.326	Papio_anubis
ENSEASG00005001625	POLR1A	94	76.389	ENSPKIG00000005468	polr1a	99	76.389	Paramormyrops_kingsleyae
ENSEASG00005001625	POLR1A	63	71.898	ENSPSIG00000009321	-	99	72.794	Pelodiscus_sinensis
ENSEASG00005001625	POLR1A	54	68.342	ENSPMGG00000009718	polr1a	95	68.342	Periophthalmus_magnuspinnatus
ENSEASG00005001625	POLR1A	100	89.461	ENSPEMG00000022224	Polr1a	100	88.825	Peromyscus_maniculatus_bairdii
ENSEASG00005001625	POLR1A	95	79.283	ENSPCIG00000004222	POLR1A	99	79.149	Phascolarctos_cinereus
ENSEASG00005001625	POLR1A	100	64.777	ENSPFOG00000005025	polr1a	100	64.039	Poecilia_formosa
ENSEASG00005001625	POLR1A	100	64.988	ENSPLAG00000021389	polr1a	100	64.512	Poecilia_latipinna
ENSEASG00005001625	POLR1A	100	63.210	ENSPMEG00000006463	polr1a	100	62.644	Poecilia_mexicana
ENSEASG00005001625	POLR1A	100	65.142	ENSPREG00000002389	polr1a	100	64.462	Poecilia_reticulata
ENSEASG00005001625	POLR1A	100	91.453	ENSPPYG00000012217	POLR1A	100	91.453	Pongo_abelii
ENSEASG00005001625	POLR1A	92	100.000	ENSPCAG00000011582	POLR1A	88	100.000	Procavia_capensis
ENSEASG00005001625	POLR1A	100	92.446	ENSPCOG00000026987	POLR1A	100	92.446	Propithecus_coquereli
ENSEASG00005001625	POLR1A	95	94.485	ENSPVAG00000012674	POLR1A	95	93.640	Pteropus_vampyrus
ENSEASG00005001625	POLR1A	100	66.107	ENSPNYG00000000026	polr1a	100	65.453	Pundamilia_nyererei
ENSEASG00005001625	POLR1A	100	66.917	ENSPNAG00000019223	polr1a	99	68.741	Pygocentrus_nattereri
ENSEASG00005001625	POLR1A	100	88.246	ENSRNOG00000009545	Polr1a	100	88.246	Rattus_norvegicus
ENSEASG00005001625	POLR1A	100	91.580	ENSRBIG00000028335	POLR1A	100	91.580	Rhinopithecus_bieti
ENSEASG00005001625	POLR1A	100	91.521	ENSRROG00000031473	POLR1A	100	91.521	Rhinopithecus_roxellana
ENSEASG00005001625	POLR1A	99	36.491	YOR341W	RPA190	99	36.603	Saccharomyces_cerevisiae
ENSEASG00005001625	POLR1A	100	90.756	ENSSBOG00000030262	POLR1A	100	90.756	Saimiri_boliviensis_boliviensis
ENSEASG00005001625	POLR1A	100	73.575	ENSSHAG00000014739	POLR1A	100	73.587	Sarcophilus_harrisii
ENSEASG00005001625	POLR1A	100	67.942	ENSSFOG00015019716	polr1a	100	68.000	Scleropages_formosus
ENSEASG00005001625	POLR1A	100	66.319	ENSSMAG00000014342	polr1a	100	66.184	Scophthalmus_maximus
ENSEASG00005001625	POLR1A	100	66.898	ENSSDUG00000014631	polr1a	100	66.705	Seriola_dumerili
ENSEASG00005001625	POLR1A	100	65.046	ENSSLDG00000024095	polr1a	100	64.429	Seriola_lalandi_dorsalis
ENSEASG00005001625	POLR1A	75	97.872	ENSSARG00000003136	-	76	97.872	Sorex_araneus
ENSEASG00005001625	POLR1A	94	76.923	ENSSPUG00000004215	POLR1A	98	76.923	Sphenodon_punctatus
ENSEASG00005001625	POLR1A	65	72.235	ENSSPAG00000016341	polr1a	94	72.235	Stegastes_partitus
ENSEASG00005001625	POLR1A	83	93.343	ENSSSCG00000008226	POLR1A	99	93.324	Sus_scrofa
ENSEASG00005001625	POLR1A	99	70.588	ENSTGUG00000010704	POLR1A	100	70.529	Taeniopygia_guttata
ENSEASG00005001625	POLR1A	100	63.537	ENSTRUG00000002210	polr1a	97	65.441	Takifugu_rubripes
ENSEASG00005001625	POLR1A	100	60.253	ENSTNIG00000010116	polr1a	100	60.161	Tetraodon_nigroviridis
ENSEASG00005001625	POLR1A	74	96.903	ENSTBEG00000008646	POLR1A	74	96.903	Tupaia_belangeri
ENSEASG00005001625	POLR1A	100	89.186	ENSTTRG00000008597	POLR1A	100	88.779	Tursiops_truncatus
ENSEASG00005001625	POLR1A	69	94.336	ENSUAMG00000012158	-	94	93.745	Ursus_americanus
ENSEASG00005001625	POLR1A	100	93.488	ENSUMAG00000006700	POLR1A	100	93.256	Ursus_maritimus
ENSEASG00005001625	POLR1A	100	93.314	ENSVVUG00000001245	POLR1A	100	93.140	Vulpes_vulpes
ENSEASG00005001625	POLR1A	100	68.099	ENSXETG00000001952	polr1a	100	69.790	Xenopus_tropicalis
ENSEASG00005001625	POLR1A	100	65.258	ENSXMAG00000004032	polr1a	100	64.669	Xiphophorus_maculatus