EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005001673 (Gene tree)
Gene ID: -
Gene Symbol: RRP1
Alias: D21S2056E|NNP-1|Nop52|RRP1A
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 38873 bases
Position: chrPSZQ01004831.1:900234-939106
Accession: 18785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005002128	Nop52	PF05997.12	1.3e-66	1	1
ENSEASP00005002130	Nop52	PF05997.12	1.3e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005002349	RRP1-201	1326	-	ENSEASP00005002128	441 (aa)	-	-
ENSEAST00005002351	RRP1-202	1366	-	ENSEASP00005002130	443 (aa)	-	-

Gene Model

Click here to download ENSEASG00005001673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005001673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005001673	RRP1	83	51.058	ENSEASG00005001687	RRP1B	50	50.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005001673	RRP1	100	70.282	ENSG00000160214	RRP1	98	93.182	Homo_sapiens
ENSEASG00005001673	RRP1	81	50.546	ENSAMEG00000011401	RRP1B	50	49.727	Ailuropoda_melanoleuca
ENSEASG00005001673	RRP1	100	73.009	ENSAMEG00000011448	RRP1	98	72.406	Ailuropoda_melanoleuca
ENSEASG00005001673	RRP1	64	48.763	ENSACIG00000019121	rrp1	77	38.363	Amphilophus_citrinellus
ENSEASG00005001673	RRP1	91	47.654	ENSAOCG00000017894	-	87	45.926	Amphiprion_ocellaris
ENSEASG00005001673	RRP1	76	51.585	ENSAPLG00000004310	RRP1B	51	48.913	Anas_platyrhynchos
ENSEASG00005001673	RRP1	100	66.376	ENSANAG00000037815	RRP1	99	67.467	Aotus_nancymaae
ENSEASG00005001673	RRP1	99	69.683	ENSBTAG00000003981	RRP1	98	69.683	Bos_taurus
ENSEASG00005001673	RRP1	83	48.021	ENSBTAG00000017418	RRP1B	59	44.444	Bos_taurus
ENSEASG00005001673	RRP1	83	49.077	ENSCJAG00000017077	RRP1B	50	48.556	Callithrix_jacchus
ENSEASG00005001673	RRP1	94	70.776	ENSCJAG00000043205	RRP1	89	71.526	Callithrix_jacchus
ENSEASG00005001673	RRP1	100	72.889	ENSCAFG00000010646	RRP1	98	73.333	Canis_familiaris
ENSEASG00005001673	RRP1	100	72.889	ENSCAFG00020018979	RRP1	98	73.333	Canis_lupus_dingo
ENSEASG00005001673	RRP1	83	51.852	ENSCAFG00020018901	RRP1B	52	48.843	Canis_lupus_dingo
ENSEASG00005001673	RRP1	99	71.041	ENSCHIG00000020948	RRP1	98	71.041	Capra_hircus
ENSEASG00005001673	RRP1	85	49.091	ENSCHIG00000021519	RRP1B	54	48.241	Capra_hircus
ENSEASG00005001673	RRP1	99	67.261	ENSTSYG00000012831	RRP1	97	66.962	Carlito_syrichta
ENSEASG00005001673	RRP1	68	68.293	ENSCAPG00000008576	RRP1	89	67.232	Cavia_aperea
ENSEASG00005001673	RRP1	77	48.045	ENSCPOG00000002396	RRP1B	51	46.113	Cavia_porcellus
ENSEASG00005001673	RRP1	99	67.793	ENSCPOG00000038986	RRP1	97	68.539	Cavia_porcellus
ENSEASG00005001673	RRP1	100	70.690	ENSCCAG00000029828	RRP1	99	70.690	Cebus_capucinus
ENSEASG00005001673	RRP1	83	50.262	ENSCCAG00000029384	RRP1B	56	49.344	Cebus_capucinus
ENSEASG00005001673	RRP1	100	69.848	ENSCATG00000015632	RRP1	99	70.474	Cercocebus_atys
ENSEASG00005001673	RRP1	96	69.585	ENSCLAG00000011639	RRP1	98	68.293	Chinchilla_lanigera
ENSEASG00005001673	RRP1	75	79.154	ENSCSAG00000007936	RRP1	100	78.078	Chlorocebus_sabaeus
ENSEASG00005001673	RRP1	75	43.844	ENSCHOG00000002426	-	54	43.072	Choloepus_hoffmanni
ENSEASG00005001673	RRP1	77	60.117	ENSCPBG00000010310	RRP1B	52	51.765	Chrysemys_picta_bellii
ENSEASG00005001673	RRP1	76	35.277	ENSCING00000003304	-	70	33.033	Ciona_intestinalis
ENSEASG00005001673	RRP1	91	63.119	ENSCANG00000042611	RRP1	84	62.376	Colobus_angolensis_palliatus
ENSEASG00005001673	RRP1	84	50.773	ENSCANG00000040952	RRP1B	51	49.616	Colobus_angolensis_palliatus
ENSEASG00005001673	RRP1	74	53.453	ENSCGRG00001010889	-	52	48.241	Cricetulus_griseus_chok1gshd
ENSEASG00005001673	RRP1	74	53.939	ENSCGRG00001023882	-	55	68.254	Cricetulus_griseus_chok1gshd
ENSEASG00005001673	RRP1	99	67.647	ENSCGRG00001011920	Rrp1	97	66.364	Cricetulus_griseus_chok1gshd
ENSEASG00005001673	RRP1	99	67.647	ENSCGRG00000008915	Rrp1	97	66.364	Cricetulus_griseus_crigri
ENSEASG00005001673	RRP1	85	48.806	ENSCSEG00000020711	-	70	48.806	Cynoglossus_semilaevis
ENSEASG00005001673	RRP1	77	47.953	ENSCVAG00000017568	-	86	47.093	Cyprinodon_variegatus
ENSEASG00005001673	RRP1	76	46.903	ENSDARG00000103337	rrp1	55	42.347	Danio_rerio
ENSEASG00005001673	RRP1	83	50.663	ENSDNOG00000032774	RRP1B	50	49.867	Dasypus_novemcinctus
ENSEASG00005001673	RRP1	100	67.912	ENSDNOG00000019880	RRP1	98	67.912	Dasypus_novemcinctus
ENSEASG00005001673	RRP1	89	61.975	ENSDORG00000002104	Rrp1	97	63.210	Dipodomys_ordii
ENSEASG00005001673	RRP1	75	63.473	ENSETEG00000002963	-	95	53.176	Echinops_telfairi
ENSEASG00005001673	RRP1	83	51.459	ENSECAG00000018018	RRP1B	50	50.532	Equus_caballus
ENSEASG00005001673	RRP1	100	98.646	ENSECAG00000015703	RRP1	100	98.646	Equus_caballus
ENSEASG00005001673	RRP1	95	42.826	ENSELUG00000015885	-	91	48.368	Esox_lucius
ENSEASG00005001673	RRP1	93	77.129	ENSFCAG00000008434	RRP1	97	74.091	Felis_catus
ENSEASG00005001673	RRP1	81	51.081	ENSFCAG00000010272	RRP1B	51	49.333	Felis_catus
ENSEASG00005001673	RRP1	99	67.342	ENSFDAG00000013728	RRP1	97	67.269	Fukomys_damarensis
ENSEASG00005001673	RRP1	70	46.341	ENSFDAG00000010899	RRP1B	52	43.832	Fukomys_damarensis
ENSEASG00005001673	RRP1	84	54.427	ENSGALG00000035696	RRP1B	53	50.614	Gallus_gallus
ENSEASG00005001673	RRP1	85	43.979	ENSGACG00000001438	rrp1	52	46.765	Gasterosteus_aculeatus
ENSEASG00005001673	RRP1	77	59.238	ENSGAGG00000000375	RRP1B	52	52.239	Gopherus_agassizii
ENSEASG00005001673	RRP1	100	70.716	ENSGGOG00000000173	RRP1	99	71.121	Gorilla_gorilla
ENSEASG00005001673	RRP1	84	48.072	ENSHGLG00000004968	RRP1B	61	45.498	Heterocephalus_glaber_female
ENSEASG00005001673	RRP1	96	68.471	ENSHGLG00000017085	RRP1	92	65.604	Heterocephalus_glaber_female
ENSEASG00005001673	RRP1	74	43.440	ENSHGLG00100002232	RRP1B	52	42.061	Heterocephalus_glaber_male
ENSEASG00005001673	RRP1	76	46.000	ENSIPUG00000000673	-	67	45.429	Ictalurus_punctatus
ENSEASG00005001673	RRP1	77	50.142	ENSSTOG00000011790	RRP1B	53	48.177	Ictidomys_tridecemlineatus
ENSEASG00005001673	RRP1	98	68.623	ENSSTOG00000011116	RRP1	98	67.654	Ictidomys_tridecemlineatus
ENSEASG00005001673	RRP1	73	46.491	ENSJJAG00000021279	Rrp1b	51	42.377	Jaculus_jaculus
ENSEASG00005001673	RRP1	99	68.989	ENSJJAG00000018886	Rrp1	97	68.090	Jaculus_jaculus
ENSEASG00005001673	RRP1	75	48.563	ENSKMAG00000005539	rrp1	66	41.648	Kryptolebias_marmoratus
ENSEASG00005001673	RRP1	77	44.258	ENSLBEG00000021417	RRP1	98	43.257	Labrus_bergylta
ENSEASG00005001673	RRP1	83	51.724	ENSLACG00000017332	-	51	50.663	Latimeria_chalumnae
ENSEASG00005001673	RRP1	75	52.071	ENSLOCG00000004064	-	57	45.116	Lepisosteus_oculatus
ENSEASG00005001673	RRP1	100	73.064	ENSLAFG00000022901	RRP1	98	65.721	Loxodonta_africana
ENSEASG00005001673	RRP1	94	48.700	ENSLAFG00000000766	RRP1B	95	48.227	Loxodonta_africana
ENSEASG00005001673	RRP1	100	69.197	ENSMFAG00000003202	RRP1	99	69.397	Macaca_fascicularis
ENSEASG00005001673	RRP1	83	51.187	ENSMMUG00000000104	RRP1B	50	50.656	Macaca_mulatta
ENSEASG00005001673	RRP1	100	70.130	ENSMMUG00000012304	RRP1	99	68.980	Macaca_mulatta
ENSEASG00005001673	RRP1	100	69.913	ENSMNEG00000031210	RRP1	99	69.181	Macaca_nemestrina
ENSEASG00005001673	RRP1	91	68.235	ENSMLEG00000037797	RRP1	99	68.000	Mandrillus_leucophaeus
ENSEASG00005001673	RRP1	84	53.927	ENSMGAG00000014591	RRP1B	53	49.048	Meleagris_gallopavo
ENSEASG00005001673	RRP1	90	58.603	ENSMAUG00000017653	Rrp1	97	55.257	Mesocricetus_auratus
ENSEASG00005001673	RRP1	83	50.794	ENSMICG00000004686	RRP1B	56	47.470	Microcebus_murinus
ENSEASG00005001673	RRP1	100	71.018	ENSMICG00000004700	RRP1	98	69.488	Microcebus_murinus
ENSEASG00005001673	RRP1	74	48.810	ENSMOCG00000001117	Rrp1b	51	45.455	Microtus_ochrogaster
ENSEASG00005001673	RRP1	99	53.704	ENSMOCG00000015687	Rrp1	97	54.938	Microtus_ochrogaster
ENSEASG00005001673	RRP1	77	45.954	ENSMMOG00000019175	rrp1	86	46.243	Mola_mola
ENSEASG00005001673	RRP1	78	61.494	ENSMODG00000021036	-	52	61.207	Monodelphis_domestica
ENSEASG00005001673	RRP1	77	54.810	ENSMODG00000021033	RRP1B	54	48.193	Monodelphis_domestica
ENSEASG00005001673	RRP1	77	49.415	ENSMALG00000010310	rrp1	88	47.953	Monopterus_albus
ENSEASG00005001673	RRP1	99	58.350	MGP_CAROLIEiJ_G0015508	Rrp1	62	80.349	Mus_caroli
ENSEASG00005001673	RRP1	74	49.695	MGP_CAROLIEiJ_G0021376	Rrp1b	53	65.079	Mus_caroli
ENSEASG00005001673	RRP1	74	50.760	ENSMUSG00000058392	Rrp1b	53	66.667	Mus_musculus
ENSEASG00005001673	RRP1	99	58.753	ENSMUSG00000061032	Rrp1	80	79.913	Mus_musculus
ENSEASG00005001673	RRP1	99	59.519	MGP_PahariEiJ_G0030921	Rrp1	64	80.786	Mus_pahari
ENSEASG00005001673	RRP1	74	51.368	MGP_PahariEiJ_G0023695	Rrp1b	53	65.079	Mus_pahari
ENSEASG00005001673	RRP1	97	76.400	MGP_SPRETEiJ_G0016321	Rrp1	80	79.913	Mus_spretus
ENSEASG00005001673	RRP1	74	51.524	MGP_SPRETEiJ_G0022290	Rrp1b	53	66.667	Mus_spretus
ENSEASG00005001673	RRP1	92	66.379	ENSMPUG00000009826	RRP1	86	80.935	Mustela_putorius_furo
ENSEASG00005001673	RRP1	71	47.500	ENSMPUG00000009810	RRP1B	51	45.399	Mustela_putorius_furo
ENSEASG00005001673	RRP1	83	51.706	ENSMLUG00000007738	RRP1B	50	51.706	Myotis_lucifugus
ENSEASG00005001673	RRP1	90	87.336	ENSMLUG00000017788	RRP1	90	79.710	Myotis_lucifugus
ENSEASG00005001673	RRP1	83	46.335	ENSNGAG00000021073	Rrp1b	52	45.980	Nannospalax_galili
ENSEASG00005001673	RRP1	99	51.220	ENSNGAG00000022344	Rrp1	99	50.813	Nannospalax_galili
ENSEASG00005001673	RRP1	83	51.187	ENSNLEG00000001490	RRP1B	51	50.656	Nomascus_leucogenys
ENSEASG00005001673	RRP1	100	68.980	ENSNLEG00000034734	RRP1	99	69.397	Nomascus_leucogenys
ENSEASG00005001673	RRP1	80	69.912	ENSMEUG00000003226	-	54	69.912	Notamacropus_eugenii
ENSEASG00005001673	RRP1	82	64.187	ENSOPRG00000001319	RRP1	100	65.110	Ochotona_princeps
ENSEASG00005001673	RRP1	68	47.855	ENSONIG00000004264	rrp1	56	39.364	Oreochromis_niloticus
ENSEASG00005001673	RRP1	75	60.843	ENSOANG00000006472	-	93	57.219	Ornithorhynchus_anatinus
ENSEASG00005001673	RRP1	55	76.316	ENSOCUG00000022843	-	77	78.723	Oryctolagus_cuniculus
ENSEASG00005001673	RRP1	82	48.518	ENSORLG00020007199	-	50	44.342	Oryzias_latipes_hni
ENSEASG00005001673	RRP1	85	46.770	ENSOMEG00000016910	-	51	43.765	Oryzias_melastigma
ENSEASG00005001673	RRP1	88	73.791	ENSOGAG00000006105	RRP1	98	67.929	Otolemur_garnettii
ENSEASG00005001673	RRP1	75	52.584	ENSOGAG00000009872	RRP1B	58	48.021	Otolemur_garnettii
ENSEASG00005001673	RRP1	99	66.366	ENSOARG00000011434	RRP1	98	66.817	Ovis_aries
ENSEASG00005001673	RRP1	76	47.278	ENSOARG00000011314	RRP1B	52	46.409	Ovis_aries
ENSEASG00005001673	RRP1	100	70.499	ENSPPAG00000029050	RRP1	99	70.905	Pan_paniscus
ENSEASG00005001673	RRP1	81	50.678	ENSPPRG00000010356	RRP1B	50	49.864	Panthera_pardus
ENSEASG00005001673	RRP1	93	76.156	ENSPPRG00000010656	RRP1	97	73.182	Panthera_pardus
ENSEASG00005001673	RRP1	85	64.524	ENSPTIG00000019473	RRP1	87	63.402	Panthera_tigris_altaica
ENSEASG00005001673	RRP1	73	49.096	ENSPTIG00000016894	RRP1B	67	42.963	Panthera_tigris_altaica
ENSEASG00005001673	RRP1	100	70.282	ENSPTRG00000013962	RRP1	99	70.690	Pan_troglodytes
ENSEASG00005001673	RRP1	100	68.547	ENSPANG00000015097	RRP1	99	68.980	Papio_anubis
ENSEASG00005001673	RRP1	80	56.510	ENSPSIG00000008152	RRP1B	52	52.632	Pelodiscus_sinensis
ENSEASG00005001673	RRP1	77	40.510	ENSPMGG00000007512	-	84	39.660	Periophthalmus_magnuspinnatus
ENSEASG00005001673	RRP1	90	70.000	ENSPEMG00000018421	Rrp1	97	67.500	Peromyscus_maniculatus_bairdii
ENSEASG00005001673	RRP1	74	50.909	ENSPEMG00000022490	Rrp1b	50	46.900	Peromyscus_maniculatus_bairdii
ENSEASG00005001673	RRP1	83	53.050	ENSPCIG00000015513	RRP1B	61	46.309	Phascolarctos_cinereus
ENSEASG00005001673	RRP1	99	54.767	ENSPCIG00000015523	-	80	58.961	Phascolarctos_cinereus
ENSEASG00005001673	RRP1	91	46.301	ENSPFOG00000007424	-	53	45.652	Poecilia_formosa
ENSEASG00005001673	RRP1	100	70.065	ENSPPYG00000011474	RRP1	99	70.474	Pongo_abelii
ENSEASG00005001673	RRP1	81	56.077	ENSPCAG00000008370	-	99	56.915	Procavia_capensis
ENSEASG00005001673	RRP1	99	69.401	ENSPCOG00000017706	RRP1	98	67.982	Propithecus_coquereli
ENSEASG00005001673	RRP1	83	50.663	ENSPCOG00000017927	RRP1B	56	46.667	Propithecus_coquereli
ENSEASG00005001673	RRP1	83	61.429	ENSPVAG00000009925	-	81	61.429	Pteropus_vampyrus
ENSEASG00005001673	RRP1	99	63.901	ENSRNOG00000001203	Rrp1	98	64.126	Rattus_norvegicus
ENSEASG00005001673	RRP1	74	51.205	ENSRNOG00000001194	Rrp1b	51	47.507	Rattus_norvegicus
ENSEASG00005001673	RRP1	100	68.764	ENSRBIG00000032082	RRP1	99	69.181	Rhinopithecus_bieti
ENSEASG00005001673	RRP1	100	68.980	ENSRROG00000039799	RRP1	99	69.181	Rhinopithecus_roxellana
ENSEASG00005001673	RRP1	83	51.187	ENSRROG00000031499	RRP1B	54	50.656	Rhinopithecus_roxellana
ENSEASG00005001673	RRP1	92	73.284	ENSSBOG00000034689	RRP1	99	70.824	Saimiri_boliviensis_boliviensis
ENSEASG00005001673	RRP1	74	58.716	ENSSHAG00000010304	-	99	59.021	Sarcophilus_harrisii
ENSEASG00005001673	RRP1	70	48.943	ENSSFOG00015003932	-	56	45.355	Scleropages_formosus
ENSEASG00005001673	RRP1	76	51.009	ENSSMAG00000016847	-	80	50.309	Scophthalmus_maximus
ENSEASG00005001673	RRP1	87	50.374	ENSSPUG00000002834	RRP1B	53	46.318	Sphenodon_punctatus
ENSEASG00005001673	RRP1	80	51.923	ENSSSCG00000021698	RRP1B	55	50.000	Sus_scrofa
ENSEASG00005001673	RRP1	99	72.197	ENSSSCG00000037061	RRP1	98	72.422	Sus_scrofa
ENSEASG00005001673	RRP1	80	48.725	ENSTRUG00000017592	rrp1	97	49.415	Takifugu_rubripes
ENSEASG00005001673	RRP1	94	42.081	ENSTNIG00000005053	rrp1	69	41.096	Tetraodon_nigroviridis
ENSEASG00005001673	RRP1	67	72.258	ENSTBEG00000001260	-	64	71.724	Tupaia_belangeri
ENSEASG00005001673	RRP1	81	48.913	ENSTBEG00000000422	RRP1B	62	47.411	Tupaia_belangeri
ENSEASG00005001673	RRP1	72	75.980	ENSTTRG00000011162	RRP1	83	75.980	Tursiops_truncatus
ENSEASG00005001673	RRP1	84	50.131	ENSTTRG00000000723	RRP1B	60	45.414	Tursiops_truncatus
ENSEASG00005001673	RRP1	83	50.933	ENSUAMG00000026765	RRP1B	55	49.867	Ursus_americanus
ENSEASG00005001673	RRP1	73	68.278	ENSUAMG00000014189	-	97	66.667	Ursus_americanus
ENSEASG00005001673	RRP1	91	71.990	ENSUMAG00000025507	RRP1	98	69.543	Ursus_maritimus
ENSEASG00005001673	RRP1	75	49.112	ENSUMAG00000025510	RRP1B	65	47.788	Ursus_maritimus
ENSEASG00005001673	RRP1	68	66.667	ENSVVUG00000024498	-	77	67.314	Vulpes_vulpes
ENSEASG00005001673	RRP1	74	51.376	ENSXETG00000013683	rrp1b	50	49.847	Xenopus_tropicalis