EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005001884 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 27695 bases
Position: chrPSZQ01004234.1:1994445-2022139
Accession: 30859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005003005	ResIII	PF04851.15	4.6e-26	1	2
ENSEASP00005003005	ResIII	PF04851.15	4.6e-26	2	2
ENSEASP00005003005	DEAD	PF00270.29	4.2e-52	1	2
ENSEASP00005003005	DEAD	PF00270.29	4.2e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005003302	SNRNP200-203	1374	-	ENSEASP00005003023	457 (aa)	-	-
ENSEAST00005003299	SNRNP200-202	1881	-	ENSEASP00005003020	626 (aa)	-	-
ENSEAST00005003284	SNRNP200-201	6432	-	ENSEASP00005003005	2143 (aa)	-	-

Gene Model

Click here to download ENSEASG00005001884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005001884's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005001884	SNRNP200	86	42.127	ENSEASG00005006324	ASCC3	80	44.165
ENSEASG00005001884	SNRNP200	65	32.558	ENSEASG00005015424	HFM1	77	32.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005001884	SNRNP200	100	98.741	ENSG00000144028	SNRNP200	100	98.741	Homo_sapiens
ENSEASG00005001884	SNRNP200	99	89.804	ENSAPOG00000010223	snrnp200	99	89.790	Acanthochromis_polyacanthus
ENSEASG00005001884	SNRNP200	100	98.788	ENSAMEG00000008996	SNRNP200	100	98.788	Ailuropoda_melanoleuca
ENSEASG00005001884	SNRNP200	97	88.972	ENSACIG00000001764	snrnp200	98	89.078	Amphilophus_citrinellus
ENSEASG00005001884	SNRNP200	99	89.710	ENSAOCG00000024593	snrnp200	100	88.865	Amphiprion_ocellaris
ENSEASG00005001884	SNRNP200	97	88.812	ENSAPEG00000012554	snrnp200	100	88.918	Amphiprion_percula
ENSEASG00005001884	SNRNP200	99	89.570	ENSATEG00000022522	snrnp200	99	89.557	Anabas_testudineus
ENSEASG00005001884	SNRNP200	99	96.620	ENSAPLG00000004313	SNRNP200	100	96.620	Anas_platyrhynchos
ENSEASG00005001884	SNRNP200	99	96.120	ENSACAG00000000434	SNRNP200	100	96.120	Anolis_carolinensis
ENSEASG00005001884	SNRNP200	100	95.535	ENSANAG00000036625	SNRNP200	100	95.721	Aotus_nancymaae
ENSEASG00005001884	SNRNP200	99	89.429	ENSACLG00000011188	snrnp200	99	89.417	Astatotilapia_calliptera
ENSEASG00005001884	SNRNP200	99	89.476	ENSAMXG00000005684	snrnp200	99	89.464	Astyanax_mexicanus
ENSEASG00005001884	SNRNP200	100	98.228	ENSBTAG00000000848	SNRNP200	100	98.228	Bos_taurus
ENSEASG00005001884	SNRNP200	100	98.695	ENSCJAG00000007514	SNRNP200	100	98.695	Callithrix_jacchus
ENSEASG00005001884	SNRNP200	100	98.002	ENSCAFG00020019979	SNRNP200	100	99.129	Canis_lupus_dingo
ENSEASG00005001884	SNRNP200	100	98.415	ENSCHIG00000020611	SNRNP200	100	98.415	Capra_hircus
ENSEASG00005001884	SNRNP200	100	98.741	ENSTSYG00000010467	SNRNP200	100	98.741	Carlito_syrichta
ENSEASG00005001884	SNRNP200	99	98.361	ENSCAPG00000017234	SNRNP200	99	98.361	Cavia_aperea
ENSEASG00005001884	SNRNP200	100	98.648	ENSCPOG00000006776	SNRNP200	100	98.648	Cavia_porcellus
ENSEASG00005001884	SNRNP200	100	98.695	ENSCCAG00000033962	SNRNP200	100	98.695	Cebus_capucinus
ENSEASG00005001884	SNRNP200	100	98.741	ENSCATG00000015790	SNRNP200	100	98.741	Cercocebus_atys
ENSEASG00005001884	SNRNP200	100	98.508	ENSCLAG00000004116	SNRNP200	100	98.508	Chinchilla_lanigera
ENSEASG00005001884	SNRNP200	100	98.695	ENSCSAG00000017369	SNRNP200	100	98.695	Chlorocebus_sabaeus
ENSEASG00005001884	SNRNP200	75	97.326	ENSCHOG00000012981	-	59	97.326	Choloepus_hoffmanni
ENSEASG00005001884	SNRNP200	100	96.695	ENSCPBG00000022571	SNRNP200	99	97.872	Chrysemys_picta_bellii
ENSEASG00005001884	SNRNP200	99	75.721	ENSCING00000005082	-	99	75.860	Ciona_intestinalis
ENSEASG00005001884	SNRNP200	100	93.578	ENSCANG00000033932	SNRNP200	100	98.811	Colobus_angolensis_palliatus
ENSEASG00005001884	SNRNP200	100	98.601	ENSCGRG00001022610	Snrnp200	100	98.601	Cricetulus_griseus_chok1gshd
ENSEASG00005001884	SNRNP200	100	98.045	ENSCGRG00000016472	Snrnp200	100	98.045	Cricetulus_griseus_crigri
ENSEASG00005001884	SNRNP200	100	88.765	ENSCSEG00000016399	snrnp200	100	88.858	Cynoglossus_semilaevis
ENSEASG00005001884	SNRNP200	100	84.569	ENSCVAG00000017631	snrnp200	99	84.662	Cyprinodon_variegatus
ENSEASG00005001884	SNRNP200	100	89.231	ENSDARG00000077536	snrnp200	99	89.324	Danio_rerio
ENSEASG00005001884	SNRNP200	100	97.203	ENSDNOG00000011227	SNRNP200	100	97.203	Dasypus_novemcinctus
ENSEASG00005001884	SNRNP200	100	95.996	ENSDORG00000005861	Snrnp200	100	95.996	Dipodomys_ordii
ENSEASG00005001884	SNRNP200	100	73.482	FBgn0263599	l(3)72Ab	99	73.389	Drosophila_melanogaster
ENSEASG00005001884	SNRNP200	95	97.607	ENSETEG00000000162	SNRNP200	74	97.607	Echinops_telfairi
ENSEASG00005001884	SNRNP200	83	80.160	ENSEBUG00000016524	snrnp200	95	80.160	Eptatretus_burgeri
ENSEASG00005001884	SNRNP200	100	98.881	ENSECAG00000019675	SNRNP200	100	98.881	Equus_caballus
ENSEASG00005001884	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSEASG00005001884	SNRNP200	99	89.710	ENSELUG00000018948	snrnp200	99	89.697	Esox_lucius
ENSEASG00005001884	SNRNP200	100	98.834	ENSFCAG00000010699	SNRNP200	100	98.834	Felis_catus
ENSEASG00005001884	SNRNP200	94	89.199	ENSFALG00000001368	-	95	89.286	Ficedula_albicollis
ENSEASG00005001884	SNRNP200	100	98.462	ENSFDAG00000004683	SNRNP200	100	98.462	Fukomys_damarensis
ENSEASG00005001884	SNRNP200	100	86.713	ENSFHEG00000003786	snrnp200	99	86.807	Fundulus_heteroclitus
ENSEASG00005001884	SNRNP200	100	88.739	ENSGMOG00000004881	snrnp200	99	88.879	Gadus_morhua
ENSEASG00005001884	SNRNP200	100	86.946	ENSGAFG00000010807	snrnp200	99	87.040	Gambusia_affinis
ENSEASG00005001884	SNRNP200	100	88.977	ENSGACG00000011474	snrnp200	99	89.163	Gasterosteus_aculeatus
ENSEASG00005001884	SNRNP200	95	97.992	ENSGAGG00000016069	SNRNP200	99	96.725	Gopherus_agassizii
ENSEASG00005001884	SNRNP200	100	98.741	ENSGGOG00000005174	SNRNP200	100	98.741	Gorilla_gorilla
ENSEASG00005001884	SNRNP200	97	86.511	ENSHBUG00000011322	snrnp200	99	86.663	Haplochromis_burtoni
ENSEASG00005001884	SNRNP200	100	98.555	ENSHGLG00000006654	SNRNP200	100	98.555	Heterocephalus_glaber_female
ENSEASG00005001884	SNRNP200	100	98.555	ENSHGLG00100018594	SNRNP200	100	98.555	Heterocephalus_glaber_male
ENSEASG00005001884	SNRNP200	100	98.695	ENSSTOG00000016351	SNRNP200	100	98.695	Ictidomys_tridecemlineatus
ENSEASG00005001884	SNRNP200	100	98.555	ENSJJAG00000023659	Snrnp200	100	98.555	Jaculus_jaculus
ENSEASG00005001884	SNRNP200	100	86.478	ENSKMAG00000003665	snrnp200	99	86.571	Kryptolebias_marmoratus
ENSEASG00005001884	SNRNP200	100	89.184	ENSLBEG00000021585	snrnp200	99	89.277	Labrus_bergylta
ENSEASG00005001884	SNRNP200	82	94.007	ENSLACG00000000226	SNRNP200	99	94.007	Latimeria_chalumnae
ENSEASG00005001884	SNRNP200	100	91.049	ENSLOCG00000015198	snrnp200	99	91.142	Lepisosteus_oculatus
ENSEASG00005001884	SNRNP200	100	98.508	ENSLAFG00000015626	SNRNP200	100	98.508	Loxodonta_africana
ENSEASG00005001884	SNRNP200	100	98.695	ENSMFAG00000040174	SNRNP200	100	98.695	Macaca_fascicularis
ENSEASG00005001884	SNRNP200	100	98.695	ENSMMUG00000023261	SNRNP200	100	98.695	Macaca_mulatta
ENSEASG00005001884	SNRNP200	100	98.648	ENSMNEG00000032398	SNRNP200	100	98.648	Macaca_nemestrina
ENSEASG00005001884	SNRNP200	100	98.741	ENSMLEG00000019083	SNRNP200	100	98.741	Mandrillus_leucophaeus
ENSEASG00005001884	SNRNP200	100	89.189	ENSMAMG00000007851	snrnp200	99	89.236	Mastacembelus_armatus
ENSEASG00005001884	SNRNP200	97	86.511	ENSMZEG00005010787	snrnp200	99	86.663	Maylandia_zebra
ENSEASG00005001884	SNRNP200	97	96.386	ENSMGAG00000001831	SNRNP200	99	96.386	Meleagris_gallopavo
ENSEASG00005001884	SNRNP200	100	98.648	ENSMAUG00000011825	Snrnp200	100	98.648	Mesocricetus_auratus
ENSEASG00005001884	SNRNP200	100	98.695	ENSMICG00000004710	SNRNP200	100	98.695	Microcebus_murinus
ENSEASG00005001884	SNRNP200	100	96.224	ENSMOCG00000011814	Snrnp200	100	96.224	Microtus_ochrogaster
ENSEASG00005001884	SNRNP200	99	87.933	ENSMMOG00000014167	snrnp200	99	87.925	Mola_mola
ENSEASG00005001884	SNRNP200	100	97.902	ENSMODG00000008475	SNRNP200	100	97.902	Monodelphis_domestica
ENSEASG00005001884	SNRNP200	99	89.757	ENSMALG00000001973	snrnp200	99	89.744	Monopterus_albus
ENSEASG00005001884	SNRNP200	100	98.555	MGP_CAROLIEiJ_G0024250	Snrnp200	100	98.555	Mus_caroli
ENSEASG00005001884	SNRNP200	100	98.601	ENSMUSG00000003660	Snrnp200	100	98.601	Mus_musculus
ENSEASG00005001884	SNRNP200	100	98.648	MGP_PahariEiJ_G0025695	Snrnp200	100	98.648	Mus_pahari
ENSEASG00005001884	SNRNP200	100	98.601	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.448	Mus_spretus
ENSEASG00005001884	SNRNP200	100	98.741	ENSMPUG00000008949	SNRNP200	100	98.741	Mustela_putorius_furo
ENSEASG00005001884	SNRNP200	100	94.266	ENSMLUG00000027511	-	100	94.406	Myotis_lucifugus
ENSEASG00005001884	SNRNP200	100	98.091	ENSMLUG00000010493	SNRNP200	100	98.091	Myotis_lucifugus
ENSEASG00005001884	SNRNP200	100	98.741	ENSNGAG00000021993	Snrnp200	100	98.741	Nannospalax_galili
ENSEASG00005001884	SNRNP200	91	88.175	ENSNBRG00000017960	snrnp200	99	88.175	Neolamprologus_brichardi
ENSEASG00005001884	SNRNP200	100	94.344	ENSNLEG00000000025	SNRNP200	100	94.833	Nomascus_leucogenys
ENSEASG00005001884	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSEASG00005001884	SNRNP200	97	97.494	ENSOPRG00000015464	SNRNP200	97	97.494	Ochotona_princeps
ENSEASG00005001884	SNRNP200	100	98.508	ENSODEG00000008366	SNRNP200	100	98.508	Octodon_degus
ENSEASG00005001884	SNRNP200	99	89.429	ENSONIG00000010714	snrnp200	99	89.417	Oreochromis_niloticus
ENSEASG00005001884	SNRNP200	100	98.601	ENSOCUG00000009864	SNRNP200	100	98.601	Oryctolagus_cuniculus
ENSEASG00005001884	SNRNP200	100	89.184	ENSORLG00000012286	snrnp200	100	89.234	Oryzias_latipes
ENSEASG00005001884	SNRNP200	100	89.231	ENSORLG00020004648	snrnp200	100	89.277	Oryzias_latipes_hni
ENSEASG00005001884	SNRNP200	100	89.184	ENSORLG00015019114	snrnp200	100	89.309	Oryzias_latipes_hsok
ENSEASG00005001884	SNRNP200	99	89.429	ENSOMEG00000011834	snrnp200	99	89.371	Oryzias_melastigma
ENSEASG00005001884	SNRNP200	100	98.741	ENSOGAG00000006879	SNRNP200	100	98.741	Otolemur_garnettii
ENSEASG00005001884	SNRNP200	100	97.390	ENSOARG00000013949	SNRNP200	100	97.390	Ovis_aries
ENSEASG00005001884	SNRNP200	100	98.741	ENSPPAG00000041559	SNRNP200	100	98.741	Pan_paniscus
ENSEASG00005001884	SNRNP200	100	98.834	ENSPPRG00000004435	SNRNP200	100	98.834	Panthera_pardus
ENSEASG00005001884	SNRNP200	100	98.368	ENSPTIG00000006380	SNRNP200	100	98.368	Panthera_tigris_altaica
ENSEASG00005001884	SNRNP200	100	98.741	ENSPTRG00000012230	SNRNP200	100	98.741	Pan_troglodytes
ENSEASG00005001884	SNRNP200	100	98.695	ENSPANG00000006017	SNRNP200	100	98.695	Papio_anubis
ENSEASG00005001884	SNRNP200	100	89.977	ENSPKIG00000014762	snrnp200	99	90.107	Paramormyrops_kingsleyae
ENSEASG00005001884	SNRNP200	100	95.666	ENSPSIG00000008580	SNRNP200	100	95.666	Pelodiscus_sinensis
ENSEASG00005001884	SNRNP200	100	97.902	ENSPCIG00000023050	SNRNP200	100	97.902	Phascolarctos_cinereus
ENSEASG00005001884	SNRNP200	100	89.329	ENSPFOG00000015110	snrnp200	99	89.422	Poecilia_formosa
ENSEASG00005001884	SNRNP200	97	88.901	ENSPLAG00000006711	snrnp200	99	89.010	Poecilia_latipinna
ENSEASG00005001884	SNRNP200	97	88.846	ENSPMEG00000021166	snrnp200	99	88.956	Poecilia_mexicana
ENSEASG00005001884	SNRNP200	100	89.371	ENSPREG00000008875	snrnp200	99	89.464	Poecilia_reticulata
ENSEASG00005001884	SNRNP200	100	98.741	ENSPPYG00000012068	SNRNP200	100	98.741	Pongo_abelii
ENSEASG00005001884	SNRNP200	92	100.000	ENSPCAG00000008536	SNRNP200	83	100.000	Procavia_capensis
ENSEASG00005001884	SNRNP200	100	98.741	ENSPCOG00000024608	SNRNP200	100	98.741	Propithecus_coquereli
ENSEASG00005001884	SNRNP200	96	98.362	ENSPVAG00000005860	SNRNP200	93	98.362	Pteropus_vampyrus
ENSEASG00005001884	SNRNP200	99	84.935	ENSPNYG00000017476	snrnp200	99	84.937	Pundamilia_nyererei
ENSEASG00005001884	SNRNP200	100	84.988	ENSPNAG00000010998	snrnp200	99	85.082	Pygocentrus_nattereri
ENSEASG00005001884	SNRNP200	100	98.648	ENSRNOG00000012157	Snrnp200	100	98.648	Rattus_norvegicus
ENSEASG00005001884	SNRNP200	100	98.741	ENSRBIG00000044690	-	100	98.741	Rhinopithecus_bieti
ENSEASG00005001884	SNRNP200	100	98.741	ENSRROG00000037952	-	100	98.741	Rhinopithecus_roxellana
ENSEASG00005001884	SNRNP200	100	98.695	ENSSBOG00000035471	SNRNP200	100	98.695	Saimiri_boliviensis_boliviensis
ENSEASG00005001884	SNRNP200	97	98.024	ENSSHAG00000000758	SNRNP200	99	98.024	Sarcophilus_harrisii
ENSEASG00005001884	SNRNP200	99	90.412	ENSSFOG00015018826	snrnp200	99	90.396	Scleropages_formosus
ENSEASG00005001884	SNRNP200	99	89.383	ENSSMAG00000005463	snrnp200	99	89.371	Scophthalmus_maximus
ENSEASG00005001884	SNRNP200	99	89.663	ENSSDUG00000021410	snrnp200	99	89.650	Seriola_dumerili
ENSEASG00005001884	SNRNP200	99	89.616	ENSSLDG00000010884	snrnp200	99	89.604	Seriola_lalandi_dorsalis
ENSEASG00005001884	SNRNP200	95	96.515	ENSSARG00000010728	SNRNP200	96	96.515	Sorex_araneus
ENSEASG00005001884	SNRNP200	100	96.457	ENSSPUG00000003726	-	100	96.457	Sphenodon_punctatus
ENSEASG00005001884	SNRNP200	99	89.710	ENSSPAG00000001842	snrnp200	99	89.697	Stegastes_partitus
ENSEASG00005001884	SNRNP200	100	98.648	ENSSSCG00000008127	SNRNP200	100	98.648	Sus_scrofa
ENSEASG00005001884	SNRNP200	99	86.394	ENSTGUG00000014475	-	100	86.577	Taeniopygia_guttata
ENSEASG00005001884	SNRNP200	99	89.336	ENSTRUG00000001307	snrnp200	99	89.324	Takifugu_rubripes
ENSEASG00005001884	SNRNP200	100	84.344	ENSTNIG00000004320	snrnp200	98	84.477	Tetraodon_nigroviridis
ENSEASG00005001884	SNRNP200	83	99.495	ENSTBEG00000003329	-	67	99.495	Tupaia_belangeri
ENSEASG00005001884	SNRNP200	100	98.462	ENSTTRG00000004983	SNRNP200	100	98.462	Tursiops_truncatus
ENSEASG00005001884	SNRNP200	75	90.490	ENSUAMG00000008395	-	95	90.682	Ursus_americanus
ENSEASG00005001884	SNRNP200	100	98.834	ENSUMAG00000012385	SNRNP200	100	98.834	Ursus_maritimus
ENSEASG00005001884	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSEASG00005001884	SNRNP200	100	98.605	ENSVVUG00000026247	SNRNP200	100	98.605	Vulpes_vulpes
ENSEASG00005001884	SNRNP200	100	93.203	ENSXETG00000001243	snrnp200	100	93.343	Xenopus_tropicalis
ENSEASG00005001884	SNRNP200	97	89.185	ENSXMAG00000002058	snrnp200	98	89.291	Xiphophorus_maculatus