EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005001922 (Gene tree)
Gene ID: -
Gene Symbol: ARL5C
Alias: ARL12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 5712 bases
Position: chrPSZQ01005487.1:7238905-7244616
Accession: 31111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005002452	MMR_HSR1	PF01926.23	8.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005002699	ARL5C-201	1648	-	ENSEASP00005002452	215 (aa)	-	-

Gene Model

Click here to download ENSEASG00005001922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005001922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005001922	ARL5C	75	47.531	ENSEASG00005000522	-	90	47.531
ENSEASG00005001922	ARL5C	70	43.396	ENSEASG00005019989	ARL4C	82	43.396
ENSEASG00005001922	ARL5C	75	46.914	ENSEASG00005010570	-	90	46.914
ENSEASG00005001922	ARL5C	63	33.088	ENSEASG00005011981	ARL10	55	33.088
ENSEASG00005001922	ARL5C	60	31.884	ENSEASG00005002926	RAB12	52	30.573
ENSEASG00005001922	ARL5C	53	30.000	ENSEASG00005019032	-	72	30.000
ENSEASG00005001922	ARL5C	72	44.156	ENSEASG00005015209	ARL3	92	44.156
ENSEASG00005001922	ARL5C	73	48.408	ENSEASG00005020057	ARL1	87	48.408
ENSEASG00005001922	ARL5C	75	47.531	ENSEASG00005017535	ARF1	90	47.531
ENSEASG00005001922	ARL5C	74	76.875	ENSEASG00005023347	ARL5A	84	76.875
ENSEASG00005001922	ARL5C	74	40.000	ENSEASG00005017293	ARL11	88	40.000
ENSEASG00005001922	ARL5C	79	40.237	ENSEASG00005018231	-	92	40.237
ENSEASG00005001922	ARL5C	80	44.253	ENSEASG00005000663	ARF4	97	44.253
ENSEASG00005001922	ARL5C	76	39.881	ENSEASG00005010902	ARL6	90	39.881
ENSEASG00005001922	ARL5C	74	82.500	ENSEASG00005019941	ARL5B	89	82.500
ENSEASG00005001922	ARL5C	70	39.869	ENSEASG00005019793	ARL14	83	39.869

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005001922	ARL5C	76	86.585	ENSAMEG00000004195	ARL5C	91	86.585	Ailuropoda_melanoleuca
ENSEASG00005001922	ARL5C	76	84.146	ENSACAG00000003879	-	92	84.146	Anolis_carolinensis
ENSEASG00005001922	ARL5C	76	92.683	ENSCAFG00000016525	ARL5C	92	92.683	Canis_familiaris
ENSEASG00005001922	ARL5C	76	91.463	ENSCHIG00000008208	ARL5C	93	90.854	Capra_hircus
ENSEASG00005001922	ARL5C	76	79.268	ENSCGRG00001000695	Arl5c	92	79.268	Cricetulus_griseus_chok1gshd
ENSEASG00005001922	ARL5C	76	79.878	ENSCGRG00000007376	Arl5c	92	79.878	Cricetulus_griseus_crigri
ENSEASG00005001922	ARL5C	76	93.293	ENSDNOG00000019741	ARL5C	92	93.293	Dasypus_novemcinctus
ENSEASG00005001922	ARL5C	76	87.195	ENSDORG00000016304	Arl5c	92	87.195	Dipodomys_ordii
ENSEASG00005001922	ARL5C	77	98.193	ENSECAG00000009024	ARL5C	93	98.193	Equus_caballus
ENSEASG00005001922	ARL5C	76	94.512	ENSFCAG00000009962	ARL5C	92	94.512	Felis_catus
ENSEASG00005001922	ARL5C	76	91.463	ENSSTOG00000011104	ARL5C	92	91.463	Ictidomys_tridecemlineatus
ENSEASG00005001922	ARL5C	77	80.606	ENSLACG00000015332	ARL5C	92	81.098	Latimeria_chalumnae
ENSEASG00005001922	ARL5C	76	94.512	ENSLAFG00000018248	ARL5C	91	94.512	Loxodonta_africana
ENSEASG00005001922	ARL5C	75	75.309	ENSMAUG00000012845	Arl5c	80	75.309	Mesocricetus_auratus
ENSEASG00005001922	ARL5C	76	93.293	ENSMICG00000002661	ARL5C	92	93.293	Microcebus_murinus
ENSEASG00005001922	ARL5C	76	78.659	ENSMOCG00000000234	Arl5c	91	78.659	Microtus_ochrogaster
ENSEASG00005001922	ARL5C	77	87.349	MGP_CAROLIEiJ_G0017071	Arl5c	93	87.349	Mus_caroli
ENSEASG00005001922	ARL5C	77	87.349	ENSMUSG00000038352	Arl5c	93	87.349	Mus_musculus
ENSEASG00005001922	ARL5C	76	88.415	MGP_PahariEiJ_G0018200	Arl5c	92	88.415	Mus_pahari
ENSEASG00005001922	ARL5C	77	87.349	MGP_SPRETEiJ_G0017917	Arl5c	93	87.349	Mus_spretus
ENSEASG00005001922	ARL5C	77	91.566	ENSMLUG00000030149	ARL5C	92	91.566	Myotis_lucifugus
ENSEASG00005001922	ARL5C	76	93.293	ENSOGAG00000005894	ARL5C	92	93.293	Otolemur_garnettii
ENSEASG00005001922	ARL5C	76	92.073	ENSOARG00000010377	ARL5C	91	92.073	Ovis_aries
ENSEASG00005001922	ARL5C	76	94.512	ENSPPRG00000000975	ARL5C	92	94.512	Panthera_pardus
ENSEASG00005001922	ARL5C	76	93.293	ENSPTIG00000017487	ARL5C	92	93.293	Panthera_tigris_altaica
ENSEASG00005001922	ARL5C	76	85.976	ENSPEMG00000008932	Arl5c	92	85.976	Peromyscus_maniculatus_bairdii
ENSEASG00005001922	ARL5C	76	93.902	ENSPCOG00000028489	ARL5C	92	93.902	Propithecus_coquereli
ENSEASG00005001922	ARL5C	72	90.968	ENSPVAG00000008495	ARL5C	91	90.968	Pteropus_vampyrus
ENSEASG00005001922	ARL5C	77	84.337	ENSRNOG00000036880	Arl5c	93	84.337	Rattus_norvegicus
ENSEASG00005001922	ARL5C	73	77.707	ENSSBOG00000021022	ARL5C	89	77.707	Saimiri_boliviensis_boliviensis
ENSEASG00005001922	ARL5C	78	82.738	ENSSPUG00000007555	ARL5C	100	84.049	Sphenodon_punctatus
ENSEASG00005001922	ARL5C	76	87.805	ENSTBEG00000007274	ARL5C	92	87.805	Tupaia_belangeri
ENSEASG00005001922	ARL5C	76	89.634	ENSUAMG00000012299	ARL5C	92	89.634	Ursus_americanus
ENSEASG00005001922	ARL5C	76	90.244	ENSUMAG00000017197	ARL5C	92	90.244	Ursus_maritimus
ENSEASG00005001922	ARL5C	76	81.707	ENSXETG00000023713	arl5c	85	81.707	Xenopus_tropicalis