EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005002072 (Gene tree)
Gene ID: -
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 19781 bases
Position: chrPSZQ01003226.1:15627979-15647759
Accession: 15762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005002658	HAT	PF02184.16	2.4e-42	1	2
ENSEASP00005002658	HAT	PF02184.16	2.4e-42	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005002919	CRNKL1-201	2678	-	ENSEASP00005002658	687 (aa)	-	UPI0001560230

Gene Model

Click here to download ENSEASG00005002072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005002072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005002072	CRNKL1	100	96.798	ENSG00000101343	CRNKL1	100	96.798	Homo_sapiens
ENSEASG00005002072	CRNKL1	99	87.187	ENSAPOG00000009705	crnkl1	97	86.519	Acanthochromis_polyacanthus
ENSEASG00005002072	CRNKL1	100	99.709	ENSAMEG00000000270	CRNKL1	83	99.709	Ailuropoda_melanoleuca
ENSEASG00005002072	CRNKL1	98	86.647	ENSACIG00000015267	crnkl1	89	86.647	Amphilophus_citrinellus
ENSEASG00005002072	CRNKL1	99	87.334	ENSAOCG00000021964	crnkl1	90	87.206	Amphiprion_ocellaris
ENSEASG00005002072	CRNKL1	99	87.187	ENSAPEG00000015041	crnkl1	90	87.059	Amphiprion_percula
ENSEASG00005002072	CRNKL1	99	86.618	ENSATEG00000001068	crnkl1	89	86.618	Anabas_testudineus
ENSEASG00005002072	CRNKL1	99	91.254	ENSAPLG00000013105	CRNKL1	99	91.254	Anas_platyrhynchos
ENSEASG00005002072	CRNKL1	99	93.129	ENSACAG00000005284	CRNKL1	99	93.129	Anolis_carolinensis
ENSEASG00005002072	CRNKL1	92	97.785	ENSANAG00000024889	CRNKL1	100	97.785	Aotus_nancymaae
ENSEASG00005002072	CRNKL1	99	87.740	ENSACLG00000010813	crnkl1	90	87.740	Astatotilapia_calliptera
ENSEASG00005002072	CRNKL1	97	88.102	ENSAMXG00000018334	crnkl1	92	86.510	Astyanax_mexicanus
ENSEASG00005002072	CRNKL1	99	98.830	ENSBTAG00000008472	CRNKL1	99	98.830	Bos_taurus
ENSEASG00005002072	CRNKL1	93	62.364	WBGene00019762	M03F8.3	92	61.337	Caenorhabditis_elegans
ENSEASG00005002072	CRNKL1	100	96.943	ENSCJAG00000005393	CRNKL1	100	96.943	Callithrix_jacchus
ENSEASG00005002072	CRNKL1	100	99.418	ENSCAFG00000005333	CRNKL1	94	99.418	Canis_familiaris
ENSEASG00005002072	CRNKL1	100	99.418	ENSCAFG00020027488	CRNKL1	100	99.418	Canis_lupus_dingo
ENSEASG00005002072	CRNKL1	99	97.368	ENSCHIG00000013171	CRNKL1	99	97.368	Capra_hircus
ENSEASG00005002072	CRNKL1	100	97.962	ENSTSYG00000004197	CRNKL1	100	97.962	Carlito_syrichta
ENSEASG00005002072	CRNKL1	95	96.284	ENSCAPG00000010501	CRNKL1	99	96.284	Cavia_aperea
ENSEASG00005002072	CRNKL1	100	96.507	ENSCPOG00000004418	CRNKL1	100	96.507	Cavia_porcellus
ENSEASG00005002072	CRNKL1	100	96.943	ENSCCAG00000027037	CRNKL1	100	96.943	Cebus_capucinus
ENSEASG00005002072	CRNKL1	100	97.089	ENSCATG00000034247	CRNKL1	100	97.089	Cercocebus_atys
ENSEASG00005002072	CRNKL1	100	96.943	ENSCLAG00000013859	CRNKL1	100	96.943	Chinchilla_lanigera
ENSEASG00005002072	CRNKL1	100	97.089	ENSCSAG00000011434	CRNKL1	100	97.089	Chlorocebus_sabaeus
ENSEASG00005002072	CRNKL1	100	98.981	ENSCHOG00000006371	CRNKL1	84	98.981	Choloepus_hoffmanni
ENSEASG00005002072	CRNKL1	99	94.161	ENSCPBG00000023501	CRNKL1	99	94.161	Chrysemys_picta_bellii
ENSEASG00005002072	CRNKL1	96	69.637	ENSCING00000002709	-	99	68.195	Ciona_intestinalis
ENSEASG00005002072	CRNKL1	100	97.234	ENSCANG00000038789	CRNKL1	100	97.234	Colobus_angolensis_palliatus
ENSEASG00005002072	CRNKL1	100	97.962	ENSCGRG00001000687	-	99	97.962	Cricetulus_griseus_chok1gshd
ENSEASG00005002072	CRNKL1	100	97.962	ENSCGRG00001001115	-	99	97.962	Cricetulus_griseus_chok1gshd
ENSEASG00005002072	CRNKL1	100	97.962	ENSCGRG00000007854	Crnkl1	99	97.962	Cricetulus_griseus_crigri
ENSEASG00005002072	CRNKL1	98	86.370	ENSCSEG00000005594	crnkl1	87	85.444	Cynoglossus_semilaevis
ENSEASG00005002072	CRNKL1	97	87.688	ENSCVAG00000015172	crnkl1	92	85.693	Cyprinodon_variegatus
ENSEASG00005002072	CRNKL1	96	87.160	ENSDARG00000007901	crnkl1	90	85.944	Danio_rerio
ENSEASG00005002072	CRNKL1	99	98.977	ENSDNOG00000016226	CRNKL1	95	98.977	Dasypus_novemcinctus
ENSEASG00005002072	CRNKL1	97	88.358	ENSDORG00000023724	-	99	88.358	Dipodomys_ordii
ENSEASG00005002072	CRNKL1	100	96.392	ENSDORG00000000394	-	100	96.392	Dipodomys_ordii
ENSEASG00005002072	CRNKL1	97	87.910	ENSDORG00000030174	-	99	87.910	Dipodomys_ordii
ENSEASG00005002072	CRNKL1	97	69.083	FBgn0000377	crn	95	69.670	Drosophila_melanogaster
ENSEASG00005002072	CRNKL1	100	85.444	ENSETEG00000003711	CRNKL1	84	85.444	Echinops_telfairi
ENSEASG00005002072	CRNKL1	99	61.155	ENSEBUG00000013461	crnkl1	96	58.419	Eptatretus_burgeri
ENSEASG00005002072	CRNKL1	100	100.000	ENSECAG00000022215	CRNKL1	100	100.000	Equus_caballus
ENSEASG00005002072	CRNKL1	100	96.215	ENSEEUG00000000413	CRNKL1	92	96.215	Erinaceus_europaeus
ENSEASG00005002072	CRNKL1	98	86.119	ENSELUG00000015424	crnkl1	97	85.234	Esox_lucius
ENSEASG00005002072	CRNKL1	100	99.709	ENSFCAG00000000714	CRNKL1	100	99.709	Felis_catus
ENSEASG00005002072	CRNKL1	98	91.964	ENSFALG00000004611	CRNKL1	100	91.964	Ficedula_albicollis
ENSEASG00005002072	CRNKL1	100	97.089	ENSFDAG00000000604	CRNKL1	100	97.089	Fukomys_damarensis
ENSEASG00005002072	CRNKL1	98	86.776	ENSFHEG00000013163	crnkl1	88	86.776	Fundulus_heteroclitus
ENSEASG00005002072	CRNKL1	97	86.228	ENSGMOG00000007609	crnkl1	96	83.811	Gadus_morhua
ENSEASG00005002072	CRNKL1	99	94.015	ENSGALG00000008429	CRNKL1	99	94.015	Gallus_gallus
ENSEASG00005002072	CRNKL1	97	87.237	ENSGAFG00000014249	crnkl1	89	86.222	Gambusia_affinis
ENSEASG00005002072	CRNKL1	99	85.234	ENSGACG00000011852	crnkl1	91	85.234	Gasterosteus_aculeatus
ENSEASG00005002072	CRNKL1	95	92.835	ENSGAGG00000021233	CRNKL1	100	93.085	Gopherus_agassizii
ENSEASG00005002072	CRNKL1	100	96.798	ENSGGOG00000014176	CRNKL1	100	96.798	Gorilla_gorilla
ENSEASG00005002072	CRNKL1	99	87.592	ENSHBUG00000005246	crnkl1	90	87.592	Haplochromis_burtoni
ENSEASG00005002072	CRNKL1	100	96.943	ENSHGLG00000010856	CRNKL1	100	96.943	Heterocephalus_glaber_female
ENSEASG00005002072	CRNKL1	100	96.943	ENSHGLG00100011521	CRNKL1	100	96.943	Heterocephalus_glaber_male
ENSEASG00005002072	CRNKL1	97	84.708	ENSHCOG00000006420	crnkl1	98	83.187	Hippocampus_comes
ENSEASG00005002072	CRNKL1	97	76.241	ENSIPUG00000006836	-	99	75.444	Ictalurus_punctatus
ENSEASG00005002072	CRNKL1	93	68.917	ENSIPUG00000000315	-	100	70.126	Ictalurus_punctatus
ENSEASG00005002072	CRNKL1	94	87.982	ENSIPUG00000006751	crnkl1	93	86.248	Ictalurus_punctatus
ENSEASG00005002072	CRNKL1	100	98.253	ENSSTOG00000014747	CRNKL1	100	98.253	Ictidomys_tridecemlineatus
ENSEASG00005002072	CRNKL1	100	96.017	ENSJJAG00000016926	Crnkl1	100	96.017	Jaculus_jaculus
ENSEASG00005002072	CRNKL1	99	86.657	ENSKMAG00000003620	crnkl1	86	86.657	Kryptolebias_marmoratus
ENSEASG00005002072	CRNKL1	97	71.025	ENSLBEG00000003543	crnkl1	92	71.345	Labrus_bergylta
ENSEASG00005002072	CRNKL1	99	87.994	ENSLACG00000001129	CRNKL1	99	87.994	Latimeria_chalumnae
ENSEASG00005002072	CRNKL1	97	89.458	ENSLOCG00000016889	crnkl1	94	88.270	Lepisosteus_oculatus
ENSEASG00005002072	CRNKL1	100	98.692	ENSLAFG00000004512	CRNKL1	100	98.692	Loxodonta_africana
ENSEASG00005002072	CRNKL1	100	97.089	ENSMFAG00000039893	CRNKL1	100	97.089	Macaca_fascicularis
ENSEASG00005002072	CRNKL1	100	97.089	ENSMMUG00000007709	CRNKL1	100	97.089	Macaca_mulatta
ENSEASG00005002072	CRNKL1	100	97.089	ENSMNEG00000037490	CRNKL1	100	97.089	Macaca_nemestrina
ENSEASG00005002072	CRNKL1	100	97.089	ENSMLEG00000034885	CRNKL1	100	97.089	Mandrillus_leucophaeus
ENSEASG00005002072	CRNKL1	99	86.765	ENSMAMG00000008757	crnkl1	90	86.765	Mastacembelus_armatus
ENSEASG00005002072	CRNKL1	99	87.740	ENSMZEG00005022345	crnkl1	90	87.740	Maylandia_zebra
ENSEASG00005002072	CRNKL1	99	93.294	ENSMGAG00000003452	CRNKL1	94	93.294	Meleagris_gallopavo
ENSEASG00005002072	CRNKL1	100	97.817	ENSMAUG00000020764	Crnkl1	99	97.817	Mesocricetus_auratus
ENSEASG00005002072	CRNKL1	100	98.399	ENSMICG00000006048	CRNKL1	100	98.399	Microcebus_murinus
ENSEASG00005002072	CRNKL1	100	89.843	ENSMOCG00000000681	-	99	89.843	Microtus_ochrogaster
ENSEASG00005002072	CRNKL1	97	69.520	ENSMOCG00000004179	-	96	69.733	Microtus_ochrogaster
ENSEASG00005002072	CRNKL1	92	86.212	ENSMMOG00000017601	crnkl1	97	86.212	Mola_mola
ENSEASG00005002072	CRNKL1	100	93.103	ENSMODG00000005961	-	99	93.103	Monodelphis_domestica
ENSEASG00005002072	CRNKL1	100	87.045	ENSMODG00000010857	-	99	87.045	Monodelphis_domestica
ENSEASG00005002072	CRNKL1	98	63.722	ENSMALG00000011211	crnkl1	89	63.583	Monopterus_albus
ENSEASG00005002072	CRNKL1	100	98.253	MGP_CAROLIEiJ_G0024394	Crnkl1	99	98.253	Mus_caroli
ENSEASG00005002072	CRNKL1	100	98.399	ENSMUSG00000001767	Crnkl1	99	98.399	Mus_musculus
ENSEASG00005002072	CRNKL1	100	96.361	MGP_PahariEiJ_G0025838	Crnkl1	99	96.361	Mus_pahari
ENSEASG00005002072	CRNKL1	100	98.253	MGP_SPRETEiJ_G0025312	Crnkl1	99	98.253	Mus_spretus
ENSEASG00005002072	CRNKL1	100	99.563	ENSMPUG00000001226	CRNKL1	100	99.563	Mustela_putorius_furo
ENSEASG00005002072	CRNKL1	100	98.547	ENSMLUG00000016513	CRNKL1	89	98.547	Myotis_lucifugus
ENSEASG00005002072	CRNKL1	100	95.857	ENSNGAG00000023097	Crnkl1	100	95.857	Nannospalax_galili
ENSEASG00005002072	CRNKL1	99	87.888	ENSNBRG00000007867	crnkl1	89	87.888	Neolamprologus_brichardi
ENSEASG00005002072	CRNKL1	100	93.450	ENSNLEG00000009862	CRNKL1	100	93.450	Nomascus_leucogenys
ENSEASG00005002072	CRNKL1	98	96.119	ENSMEUG00000012167	-	100	96.119	Notamacropus_eugenii
ENSEASG00005002072	CRNKL1	100	86.337	ENSMEUG00000002361	-	99	86.337	Notamacropus_eugenii
ENSEASG00005002072	CRNKL1	75	67.568	ENSOPRG00000009242	-	61	67.568	Ochotona_princeps
ENSEASG00005002072	CRNKL1	100	96.798	ENSODEG00000012175	CRNKL1	100	96.798	Octodon_degus
ENSEASG00005002072	CRNKL1	99	88.183	ENSONIG00000018728	crnkl1	89	88.183	Oreochromis_niloticus
ENSEASG00005002072	CRNKL1	99	98.397	ENSOCUG00000015484	CRNKL1	83	98.397	Oryctolagus_cuniculus
ENSEASG00005002072	CRNKL1	99	84.088	ENSORLG00000017240	crnkl1	96	80.608	Oryzias_latipes
ENSEASG00005002072	CRNKL1	97	86.186	ENSORLG00020001742	crnkl1	89	86.186	Oryzias_latipes_hni
ENSEASG00005002072	CRNKL1	99	84.234	ENSORLG00015019564	crnkl1	91	84.234	Oryzias_latipes_hsok
ENSEASG00005002072	CRNKL1	99	85.109	ENSOMEG00000019895	crnkl1	91	85.109	Oryzias_melastigma
ENSEASG00005002072	CRNKL1	99	97.664	ENSOGAG00000011544	CRNKL1	99	97.664	Otolemur_garnettii
ENSEASG00005002072	CRNKL1	99	98.538	ENSOARG00000002150	CRNKL1	89	98.538	Ovis_aries
ENSEASG00005002072	CRNKL1	99	95.588	ENSPPAG00000027847	CRNKL1	83	95.633	Pan_paniscus
ENSEASG00005002072	CRNKL1	100	99.709	ENSPPRG00000001955	CRNKL1	100	99.709	Panthera_pardus
ENSEASG00005002072	CRNKL1	100	99.709	ENSPTIG00000007393	CRNKL1	100	99.709	Panthera_tigris_altaica
ENSEASG00005002072	CRNKL1	100	96.798	ENSPTRG00000030609	CRNKL1	100	96.798	Pan_troglodytes
ENSEASG00005002072	CRNKL1	100	97.089	ENSPANG00000017420	CRNKL1	100	97.089	Papio_anubis
ENSEASG00005002072	CRNKL1	96	83.008	ENSPKIG00000017093	crnkl1	89	82.258	Paramormyrops_kingsleyae
ENSEASG00005002072	CRNKL1	99	92.972	ENSPSIG00000012705	CRNKL1	99	92.972	Pelodiscus_sinensis
ENSEASG00005002072	CRNKL1	99	79.912	ENSPMGG00000006263	crnkl1	97	79.124	Periophthalmus_magnuspinnatus
ENSEASG00005002072	CRNKL1	100	97.962	ENSPEMG00000000073	-	99	97.962	Peromyscus_maniculatus_bairdii
ENSEASG00005002072	CRNKL1	99	82.387	ENSPMAG00000002250	crnkl1	99	82.387	Petromyzon_marinus
ENSEASG00005002072	CRNKL1	100	95.488	ENSPCIG00000025825	CRNKL1	96	95.488	Phascolarctos_cinereus
ENSEASG00005002072	CRNKL1	97	87.087	ENSPFOG00000005102	crnkl1	92	85.882	Poecilia_formosa
ENSEASG00005002072	CRNKL1	97	87.087	ENSPLAG00000007288	crnkl1	88	86.074	Poecilia_latipinna
ENSEASG00005002072	CRNKL1	97	87.237	ENSPMEG00000008865	crnkl1	92	86.029	Poecilia_mexicana
ENSEASG00005002072	CRNKL1	97	86.787	ENSPREG00000012615	crnkl1	92	85.191	Poecilia_reticulata
ENSEASG00005002072	CRNKL1	100	97.089	ENSPPYG00000010747	CRNKL1	81	97.089	Pongo_abelii
ENSEASG00005002072	CRNKL1	99	92.794	ENSPCAG00000003296	CRNKL1	85	92.868	Procavia_capensis
ENSEASG00005002072	CRNKL1	100	97.089	ENSPCOG00000017608	CRNKL1	83	97.089	Propithecus_coquereli
ENSEASG00005002072	CRNKL1	100	98.981	ENSPVAG00000006207	CRNKL1	83	98.981	Pteropus_vampyrus
ENSEASG00005002072	CRNKL1	99	87.592	ENSPNYG00000001977	crnkl1	90	87.592	Pundamilia_nyererei
ENSEASG00005002072	CRNKL1	98	88.657	ENSPNAG00000001507	crnkl1	97	84.581	Pygocentrus_nattereri
ENSEASG00005002072	CRNKL1	100	98.399	ENSRNOG00000010587	Crnkl1	99	98.399	Rattus_norvegicus
ENSEASG00005002072	CRNKL1	100	97.962	ENSRNOG00000040045	Crnkl1	99	97.962	Rattus_norvegicus
ENSEASG00005002072	CRNKL1	100	96.943	ENSRBIG00000031770	CRNKL1	100	96.943	Rhinopithecus_bieti
ENSEASG00005002072	CRNKL1	100	96.798	ENSRROG00000040450	CRNKL1	100	96.798	Rhinopithecus_roxellana
ENSEASG00005002072	CRNKL1	94	37.826	YLR117C	CLF1	99	37.916	Saccharomyces_cerevisiae
ENSEASG00005002072	CRNKL1	100	96.943	ENSSBOG00000029672	CRNKL1	100	96.943	Saimiri_boliviensis_boliviensis
ENSEASG00005002072	CRNKL1	96	74.962	ENSSHAG00000011199	CRNKL1	99	74.962	Sarcophilus_harrisii
ENSEASG00005002072	CRNKL1	96	87.915	ENSSFOG00015000946	crnkl1	89	86.510	Scleropages_formosus
ENSEASG00005002072	CRNKL1	99	85.359	ENSSMAG00000007933	crnkl1	87	86.587	Scophthalmus_maximus
ENSEASG00005002072	CRNKL1	99	80.412	ENSSDUG00000012625	crnkl1	87	80.412	Seriola_dumerili
ENSEASG00005002072	CRNKL1	99	87.168	ENSSLDG00000021413	crnkl1	88	87.168	Seriola_lalandi_dorsalis
ENSEASG00005002072	CRNKL1	100	98.253	ENSSARG00000006443	CRNKL1	82	98.253	Sorex_araneus
ENSEASG00005002072	CRNKL1	99	93.558	ENSSPUG00000005254	CRNKL1	99	93.558	Sphenodon_punctatus
ENSEASG00005002072	CRNKL1	97	88.138	ENSSPAG00000016150	crnkl1	86	88.138	Stegastes_partitus
ENSEASG00005002072	CRNKL1	100	99.418	ENSSSCG00000038587	CRNKL1	99	99.418	Sus_scrofa
ENSEASG00005002072	CRNKL1	99	92.566	ENSTGUG00000007645	CRNKL1	98	92.566	Taeniopygia_guttata
ENSEASG00005002072	CRNKL1	98	81.045	ENSTRUG00000015417	crnkl1	90	80.412	Takifugu_rubripes
ENSEASG00005002072	CRNKL1	97	85.607	ENSTNIG00000010710	crnkl1	99	84.111	Tetraodon_nigroviridis
ENSEASG00005002072	CRNKL1	92	97.310	ENSTBEG00000001304	CRNKL1	82	97.310	Tupaia_belangeri
ENSEASG00005002072	CRNKL1	91	94.720	ENSTTRG00000000484	CRNKL1	81	94.778	Tursiops_truncatus
ENSEASG00005002072	CRNKL1	100	99.709	ENSUAMG00000018586	CRNKL1	100	99.709	Ursus_americanus
ENSEASG00005002072	CRNKL1	100	99.709	ENSUMAG00000024957	CRNKL1	100	99.709	Ursus_maritimus
ENSEASG00005002072	CRNKL1	100	99.418	ENSVVUG00000012559	CRNKL1	82	99.418	Vulpes_vulpes
ENSEASG00005002072	CRNKL1	99	91.121	ENSXETG00000009698	crnkl1	99	91.121	Xenopus_tropicalis
ENSEASG00005002072	CRNKL1	97	86.357	ENSXCOG00000000824	crnkl1	91	84.627	Xiphophorus_couchianus
ENSEASG00005002072	CRNKL1	97	87.237	ENSXMAG00000006896	crnkl1	91	85.484	Xiphophorus_maculatus