EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005002965 (Gene tree)
Gene ID: -
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 383378 bases
Position: chrPSZQ01008525.1:14349294-14732671
Accession: 18585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005003912	RRM_1	PF00076.22	5.7e-34	1	2
ENSEASP00005003912	RRM_1	PF00076.22	5.7e-34	2	2
ENSEASP00005003926	RRM_1	PF00076.22	4.7e-31	1	2
ENSEASP00005003926	RRM_1	PF00076.22	4.7e-31	2	2
ENSEASP00005003907	RRM_1	PF00076.22	8.4e-31	1	2
ENSEASP00005003907	RRM_1	PF00076.22	8.4e-31	2	2
ENSEASP00005003923	RRM_1	PF00076.22	9.7e-31	1	2
ENSEASP00005003923	RRM_1	PF00076.22	9.7e-31	2	2
ENSEASP00005003903	RRM_1	PF00076.22	9.9e-31	1	2
ENSEASP00005003903	RRM_1	PF00076.22	9.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005004284	MSI2-201	1492	-	ENSEASP00005003903	470 (aa)	-	-
ENSEAST00005004293	MSI2-203	1214	-	ENSEASP00005003912	367 (aa)	-	-
ENSEAST00005004288	MSI2-202	1442	-	ENSEASP00005003907	443 (aa)	-	-
ENSEAST00005004308	MSI2-205	1489	-	ENSEASP00005003926	362 (aa)	-	-
ENSEAST00005004304	MSI2-204	1474	-	ENSEASP00005003923	464 (aa)	-	-

Gene Model

Click here to download ENSEASG00005002965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005002965's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005002965	MSI2	50	47.027	ENSEASG00005012572	-	72	44.000
ENSEASG00005002965	MSI2	97	69.688	ENSEASG00005004736	MSI1	90	72.638
ENSEASG00005002965	MSI2	50	47.872	ENSEASG00005016278	HNRNPD	85	40.000
ENSEASG00005002965	MSI2	50	47.568	ENSEASG00005016276	-	61	43.363
ENSEASG00005002965	MSI2	60	37.931	ENSEASG00005007393	TIA1	58	37.931
ENSEASG00005002965	MSI2	51	43.103	ENSEASG00005020591	-	66	42.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005002965	MSI2	97	89.112	ENSG00000153944	MSI2	100	100.000	Homo_sapiens
ENSEASG00005002965	MSI2	97	80.114	ENSAPOG00000001658	msi2a	93	90.301	Acanthochromis_polyacanthus
ENSEASG00005002965	MSI2	97	89.174	ENSAMEG00000002697	MSI2	96	92.810	Ailuropoda_melanoleuca
ENSEASG00005002965	MSI2	96	74.474	ENSACIG00000009475	msi2a	94	78.299	Amphilophus_citrinellus
ENSEASG00005002965	MSI2	97	80.114	ENSAPEG00000007706	msi2a	93	90.301	Amphiprion_percula
ENSEASG00005002965	MSI2	97	80.114	ENSATEG00000010498	msi2a	93	90.301	Anabas_testudineus
ENSEASG00005002965	MSI2	97	80.374	ENSATEG00000003301	-	100	90.210	Anabas_testudineus
ENSEASG00005002965	MSI2	97	79.037	ENSACAG00000005452	MSI2	70	99.057	Anolis_carolinensis
ENSEASG00005002965	MSI2	97	87.429	ENSANAG00000037827	MSI2	100	100.000	Aotus_nancymaae
ENSEASG00005002965	MSI2	97	79.830	ENSACLG00000007752	msi2a	93	89.967	Astatotilapia_calliptera
ENSEASG00005002965	MSI2	97	83.191	ENSAMXG00000032796	msi2a	94	89.967	Astyanax_mexicanus
ENSEASG00005002965	MSI2	97	94.931	ENSAMXG00000010474	msi2b	100	92.977	Astyanax_mexicanus
ENSEASG00005002965	MSI2	100	95.469	ENSBTAG00000004406	MSI2	100	100.000	Bos_taurus
ENSEASG00005002965	MSI2	60	63.158	WBGene00003423	msi-1	71	63.158	Caenorhabditis_elegans
ENSEASG00005002965	MSI2	97	87.429	ENSCJAG00000013998	MSI2	100	100.000	Callithrix_jacchus
ENSEASG00005002965	MSI2	97	88.623	ENSCAFG00020025620	MSI2	100	90.164	Canis_lupus_dingo
ENSEASG00005002965	MSI2	97	87.143	ENSCHIG00000016580	MSI2	94	95.469	Capra_hircus
ENSEASG00005002965	MSI2	97	82.462	ENSCPOG00000034042	MSI2	99	92.414	Cavia_porcellus
ENSEASG00005002965	MSI2	97	87.429	ENSCCAG00000033927	MSI2	100	100.000	Cebus_capucinus
ENSEASG00005002965	MSI2	97	87.429	ENSCATG00000040879	MSI2	100	100.000	Cercocebus_atys
ENSEASG00005002965	MSI2	97	89.143	ENSCLAG00000014325	MSI2	94	89.320	Chinchilla_lanigera
ENSEASG00005002965	MSI2	97	87.429	ENSCSAG00000005633	MSI2	94	95.793	Chlorocebus_sabaeus
ENSEASG00005002965	MSI2	69	100.000	ENSCHOG00000008660	MSI2	83	100.000	Choloepus_hoffmanni
ENSEASG00005002965	MSI2	97	84.591	ENSCPBG00000009942	MSI2	94	91.429	Chrysemys_picta_bellii
ENSEASG00005002965	MSI2	58	72.000	ENSCING00000018579	-	95	53.211	Ciona_intestinalis
ENSEASG00005002965	MSI2	59	66.516	ENSCSAVG00000010397	-	71	65.066	Ciona_savignyi
ENSEASG00005002965	MSI2	97	89.112	ENSCANG00000036414	MSI2	100	100.000	Colobus_angolensis_palliatus
ENSEASG00005002965	MSI2	97	87.179	ENSCGRG00001013330	Msi2	94	95.484	Cricetulus_griseus_chok1gshd
ENSEASG00005002965	MSI2	97	89.076	ENSCGRG00000003141	Msi2	100	89.032	Cricetulus_griseus_crigri
ENSEASG00005002965	MSI2	81	61.603	ENSCSEG00000013557	msi2a	83	70.588	Cynoglossus_semilaevis
ENSEASG00005002965	MSI2	97	72.647	ENSCSEG00000003266	-	90	81.271	Cynoglossus_semilaevis
ENSEASG00005002965	MSI2	97	79.830	ENSCVAG00000017075	msi2a	93	92.500	Cyprinodon_variegatus
ENSEASG00005002965	MSI2	97	75.696	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSEASG00005002965	MSI2	97	78.400	ENSDARG00000033901	msi2a	95	76.839	Danio_rerio
ENSEASG00005002965	MSI2	97	86.707	ENSDNOG00000014501	MSI2	100	96.959	Dasypus_novemcinctus
ENSEASG00005002965	MSI2	81	73.418	ENSDORG00000005394	Msi2	84	86.139	Dipodomys_ordii
ENSEASG00005002965	MSI2	97	56.044	FBgn0260943	Rbp6	88	68.750	Drosophila_melanogaster
ENSEASG00005002965	MSI2	62	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSEASG00005002965	MSI2	90	62.162	ENSEBUG00000006732	msi2a	86	65.909	Eptatretus_burgeri
ENSEASG00005002965	MSI2	97	91.714	ENSECAG00000011435	MSI2	94	93.678	Equus_caballus
ENSEASG00005002965	MSI2	85	71.959	ENSEEUG00000007810	MSI2	100	85.375	Erinaceus_europaeus
ENSEASG00005002965	MSI2	98	93.607	ENSELUG00000011747	msi2a	93	91.639	Esox_lucius
ENSEASG00005002965	MSI2	97	83.284	ENSELUG00000001361	msi2b	93	83.654	Esox_lucius
ENSEASG00005002965	MSI2	97	87.429	ENSFCAG00000041686	MSI2	100	100.000	Felis_catus
ENSEASG00005002965	MSI2	97	89.143	ENSFDAG00000016118	MSI2	100	89.320	Fukomys_damarensis
ENSEASG00005002965	MSI2	97	79.830	ENSFHEG00000000084	msi2a	93	89.967	Fundulus_heteroclitus
ENSEASG00005002965	MSI2	97	87.714	ENSGALG00000005567	MSI2	94	87.702	Gallus_gallus
ENSEASG00005002965	MSI2	90	71.217	ENSGAFG00000006974	msi2a	93	84.211	Gambusia_affinis
ENSEASG00005002965	MSI2	97	90.031	ENSGAGG00000016542	MSI2	100	93.092	Gopherus_agassizii
ENSEASG00005002965	MSI2	97	89.112	ENSGGOG00000013182	MSI2	100	100.000	Gorilla_gorilla
ENSEASG00005002965	MSI2	97	79.830	ENSHBUG00000020800	msi2a	93	89.967	Haplochromis_burtoni
ENSEASG00005002965	MSI2	95	80.286	ENSHGLG00000012444	MSI2	93	75.714	Heterocephalus_glaber_female
ENSEASG00005002965	MSI2	78	83.621	ENSHGLG00100003744	MSI2	94	90.722	Heterocephalus_glaber_male
ENSEASG00005002965	MSI2	95	77.259	ENSHCOG00000000266	msi2a	90	84.950	Hippocampus_comes
ENSEASG00005002965	MSI2	93	63.032	ENSHCOG00000017241	-	64	86.730	Hippocampus_comes
ENSEASG00005002965	MSI2	99	79.701	ENSIPUG00000003732	msi2b	93	88.963	Ictalurus_punctatus
ENSEASG00005002965	MSI2	97	74.857	ENSIPUG00000021097	msi2a	93	89.632	Ictalurus_punctatus
ENSEASG00005002965	MSI2	97	82.462	ENSSTOG00000007884	MSI2	99	92.414	Ictidomys_tridecemlineatus
ENSEASG00005002965	MSI2	78	75.862	ENSJJAG00000006292	-	100	85.930	Jaculus_jaculus
ENSEASG00005002965	MSI2	97	78.400	ENSKMAG00000009494	msi2a	89	92.058	Kryptolebias_marmoratus
ENSEASG00005002965	MSI2	90	92.411	ENSLBEG00000007061	msi2a	93	90.301	Labrus_bergylta
ENSEASG00005002965	MSI2	97	68.000	ENSLBEG00000026223	-	100	66.569	Labrus_bergylta
ENSEASG00005002965	MSI2	51	97.143	ENSLACG00000016798	MSI2	100	100.000	Latimeria_chalumnae
ENSEASG00005002965	MSI2	97	81.551	ENSLOCG00000004675	msi2b	95	78.689	Lepisosteus_oculatus
ENSEASG00005002965	MSI2	97	89.112	ENSMFAG00000003775	MSI2	100	100.000	Macaca_fascicularis
ENSEASG00005002965	MSI2	97	89.112	ENSMMUG00000002069	MSI2	100	100.000	Macaca_mulatta
ENSEASG00005002965	MSI2	97	87.429	ENSMNEG00000045275	MSI2	100	100.000	Macaca_nemestrina
ENSEASG00005002965	MSI2	97	89.112	ENSMLEG00000033888	MSI2	100	100.000	Mandrillus_leucophaeus
ENSEASG00005002965	MSI2	97	79.887	ENSMAMG00000010503	msi2a	93	87.960	Mastacembelus_armatus
ENSEASG00005002965	MSI2	97	78.507	ENSMAMG00000002488	-	95	93.720	Mastacembelus_armatus
ENSEASG00005002965	MSI2	97	81.429	ENSMZEG00005007676	msi2a	94	89.967	Maylandia_zebra
ENSEASG00005002965	MSI2	97	88.889	ENSMAUG00000003862	Msi2	94	89.032	Mesocricetus_auratus
ENSEASG00005002965	MSI2	97	87.429	ENSMICG00000013598	-	100	100.000	Microcebus_murinus
ENSEASG00005002965	MSI2	97	69.231	ENSMICG00000032913	-	93	75.333	Microcebus_murinus
ENSEASG00005002965	MSI2	97	89.143	ENSMOCG00000005820	Msi2	94	89.320	Microtus_ochrogaster
ENSEASG00005002965	MSI2	96	77.901	ENSMMOG00000008348	msi2a	97	86.207	Mola_mola
ENSEASG00005002965	MSI2	78	82.328	ENSMODG00000014790	MSI2	94	89.175	Monodelphis_domestica
ENSEASG00005002965	MSI2	97	95.455	ENSMALG00000000071	msi2a	93	95.455	Monopterus_albus
ENSEASG00005002965	MSI2	97	89.143	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSEASG00005002965	MSI2	97	89.143	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSEASG00005002965	MSI2	97	89.143	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSEASG00005002965	MSI2	97	89.143	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSEASG00005002965	MSI2	100	95.793	ENSMPUG00000015377	MSI2	100	100.000	Mustela_putorius_furo
ENSEASG00005002965	MSI2	100	95.793	ENSMLUG00000007865	MSI2	100	96.552	Myotis_lucifugus
ENSEASG00005002965	MSI2	97	89.143	ENSNGAG00000017807	Msi2	94	89.320	Nannospalax_galili
ENSEASG00005002965	MSI2	97	78.933	ENSNBRG00000014596	msi2a	93	89.967	Neolamprologus_brichardi
ENSEASG00005002965	MSI2	97	88.690	ENSNLEG00000008059	MSI2	100	100.000	Nomascus_leucogenys
ENSEASG00005002965	MSI2	62	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSEASG00005002965	MSI2	97	89.143	ENSODEG00000011974	MSI2	94	89.320	Octodon_degus
ENSEASG00005002965	MSI2	97	69.398	ENSOANG00000005667	MSI2	79	89.474	Ornithorhynchus_anatinus
ENSEASG00005002965	MSI2	100	95.793	ENSOCUG00000010440	MSI2	100	96.552	Oryctolagus_cuniculus
ENSEASG00005002965	MSI2	97	80.896	ENSORLG00000009671	msi2a	94	90.301	Oryzias_latipes
ENSEASG00005002965	MSI2	97	89.231	ENSORLG00020021556	msi2a	100	86.207	Oryzias_latipes_hni
ENSEASG00005002965	MSI2	97	80.896	ENSORLG00015004592	msi2a	94	90.301	Oryzias_latipes_hsok
ENSEASG00005002965	MSI2	97	79.942	ENSOMEG00000000146	msi2a	95	90.301	Oryzias_melastigma
ENSEASG00005002965	MSI2	96	83.476	ENSOGAG00000005621	MSI2	99	91.262	Otolemur_garnettii
ENSEASG00005002965	MSI2	97	89.112	ENSPPAG00000037697	MSI2	100	100.000	Pan_paniscus
ENSEASG00005002965	MSI2	97	87.429	ENSPPRG00000001848	MSI2	100	100.000	Panthera_pardus
ENSEASG00005002965	MSI2	97	88.690	ENSPTIG00000021678	MSI2	88	100.000	Panthera_tigris_altaica
ENSEASG00005002965	MSI2	63	82.456	ENSPTIG00000021873	-	93	77.917	Panthera_tigris_altaica
ENSEASG00005002965	MSI2	97	89.112	ENSPTRG00000009437	MSI2	100	100.000	Pan_troglodytes
ENSEASG00005002965	MSI2	97	87.429	ENSPANG00000022319	MSI2	100	100.000	Papio_anubis
ENSEASG00005002965	MSI2	97	79.387	ENSPKIG00000007038	-	89	92.000	Paramormyrops_kingsleyae
ENSEASG00005002965	MSI2	97	77.083	ENSPSIG00000008618	MSI2	74	97.468	Pelodiscus_sinensis
ENSEASG00005002965	MSI2	94	78.324	ENSPMGG00000005888	msi2a	93	89.632	Periophthalmus_magnuspinnatus
ENSEASG00005002965	MSI2	97	90.571	ENSPCIG00000006063	MSI2	94	92.049	Phascolarctos_cinereus
ENSEASG00005002965	MSI2	94	76.590	ENSPREG00000000881	msi2a	89	92.500	Poecilia_reticulata
ENSEASG00005002965	MSI2	97	81.495	ENSPPYG00000008244	-	100	93.089	Pongo_abelii
ENSEASG00005002965	MSI2	77	59.431	ENSPCAG00000010552	MSI2	100	67.886	Procavia_capensis
ENSEASG00005002965	MSI2	53	100.000	ENSPCOG00000019195	-	100	100.000	Propithecus_coquereli
ENSEASG00005002965	MSI2	73	100.000	ENSPVAG00000017053	MSI2	91	100.000	Pteropus_vampyrus
ENSEASG00005002965	MSI2	97	81.429	ENSPNYG00000018393	msi2a	94	89.967	Pundamilia_nyererei
ENSEASG00005002965	MSI2	97	83.191	ENSPNAG00000014957	msi2a	94	90.301	Pygocentrus_nattereri
ENSEASG00005002965	MSI2	97	82.738	ENSPNAG00000000844	msi2b	93	90.635	Pygocentrus_nattereri
ENSEASG00005002965	MSI2	97	86.293	ENSRNOG00000025338	Msi2	100	96.853	Rattus_norvegicus
ENSEASG00005002965	MSI2	53	100.000	ENSRROG00000034421	-	100	100.000	Rhinopithecus_roxellana
ENSEASG00005002965	MSI2	97	89.112	ENSSBOG00000026425	MSI2	100	100.000	Saimiri_boliviensis_boliviensis
ENSEASG00005002965	MSI2	97	87.966	ENSSHAG00000008672	MSI2	100	88.026	Sarcophilus_harrisii
ENSEASG00005002965	MSI2	97	62.602	ENSSFOG00015012168	msi2b	67	86.957	Scleropages_formosus
ENSEASG00005002965	MSI2	97	78.348	ENSSFOG00015021687	-	97	84.385	Scleropages_formosus
ENSEASG00005002965	MSI2	97	80.114	ENSSMAG00000018484	msi2a	93	90.301	Scophthalmus_maximus
ENSEASG00005002965	MSI2	97	80.114	ENSSDUG00000014507	msi2a	93	90.301	Seriola_dumerili
ENSEASG00005002965	MSI2	97	79.941	ENSSDUG00000021968	-	86	95.385	Seriola_dumerili
ENSEASG00005002965	MSI2	94	78.902	ENSSLDG00000017172	msi2a	93	90.301	Seriola_lalandi_dorsalis
ENSEASG00005002965	MSI2	97	73.350	ENSSPAG00000017793	msi2a	89	85.612	Stegastes_partitus
ENSEASG00005002965	MSI2	100	89.646	ENSSSCG00000038505	MSI2	100	100.000	Sus_scrofa
ENSEASG00005002965	MSI2	78	82.759	ENSTGUG00000008452	MSI2	94	89.691	Taeniopygia_guttata
ENSEASG00005002965	MSI2	97	80.415	ENSTRUG00000021248	msi2a	87	89.632	Takifugu_rubripes
ENSEASG00005002965	MSI2	62	83.636	ENSTBEG00000001241	MSI2	67	83.636	Tupaia_belangeri
ENSEASG00005002965	MSI2	97	65.836	ENSTTRG00000002189	MSI2	100	87.805	Tursiops_truncatus
ENSEASG00005002965	MSI2	100	95.793	ENSUAMG00000000700	MSI2	100	100.000	Ursus_americanus
ENSEASG00005002965	MSI2	93	76.299	ENSUMAG00000000505	MSI2	97	89.209	Ursus_maritimus
ENSEASG00005002965	MSI2	55	84.615	ENSVPAG00000006837	-	62	84.615	Vicugna_pacos
ENSEASG00005002965	MSI2	100	90.112	ENSVVUG00000011783	MSI2	100	90.112	Vulpes_vulpes
ENSEASG00005002965	MSI2	96	93.370	ENSXCOG00000006113	msi2a	90	86.207	Xiphophorus_couchianus
ENSEASG00005002965	MSI2	97	79.830	ENSXMAG00000000608	msi2a	93	92.500	Xiphophorus_maculatus