EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005003132 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 209278 bases
Position: chrPSZQ01001967.1:5059799-5269076
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005004379	S1	PF00575.23	2.5e-10	1	1
ENSEASP00005004378	S1	PF00575.23	6.3e-10	1	1
ENSEASP00005004345	S1	PF00575.23	2.8e-09	1	1
ENSEASP00005004373	S1	PF00575.23	2.9e-09	1	1
ENSEASP00005004361	S1	PF00575.23	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005004778	SRBD1-203	2907	-	ENSEASP00005004361	968 (aa)	-	-
ENSEAST00005004790	SRBD1-204	2379	-	ENSEASP00005004373	792 (aa)	-	-
ENSEAST00005004755	SRBD1-201	2655	-	ENSEASP00005004340	884 (aa)	-	-
ENSEAST00005004797	SRBD1-205	798	-	ENSEASP00005004378	265 (aa)	-	-
ENSEAST00005004798	SRBD1-206	489	-	ENSEASP00005004379	162 (aa)	-	-
ENSEAST00005004760	SRBD1-202	2793	-	ENSEASP00005004345	930 (aa)	-	-

Gene Model

Click here to download ENSEASG00005003132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005003132's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005003132	SRBD1	97	94.268	ENSG00000068784	SRBD1	100	88.253	Homo_sapiens
ENSEASG00005003132	SRBD1	97	57.325	ENSAPOG00000005103	si:ch211-117n7.8	94	51.882	Acanthochromis_polyacanthus
ENSEASG00005003132	SRBD1	97	94.904	ENSAMEG00000005993	SRBD1	100	90.462	Ailuropoda_melanoleuca
ENSEASG00005003132	SRBD1	97	56.688	ENSACIG00000009875	si:ch211-117n7.8	97	50.868	Amphilophus_citrinellus
ENSEASG00005003132	SRBD1	98	56.343	ENSAOCG00000024718	si:ch211-117n7.8	94	52.449	Amphiprion_ocellaris
ENSEASG00005003132	SRBD1	98	56.296	ENSAPEG00000002645	si:ch211-117n7.8	97	52.352	Amphiprion_percula
ENSEASG00005003132	SRBD1	98	58.647	ENSATEG00000010844	si:ch211-117n7.8	84	56.537	Anabas_testudineus
ENSEASG00005003132	SRBD1	94	81.551	ENSAPLG00000006313	SRBD1	100	68.725	Anas_platyrhynchos
ENSEASG00005003132	SRBD1	97	73.248	ENSACAG00000003811	-	100	75.079	Anolis_carolinensis
ENSEASG00005003132	SRBD1	97	93.631	ENSANAG00000025573	SRBD1	100	88.052	Aotus_nancymaae
ENSEASG00005003132	SRBD1	98	54.815	ENSACLG00000024219	si:ch211-117n7.8	94	50.307	Astatotilapia_calliptera
ENSEASG00005003132	SRBD1	98	58.647	ENSAMXG00000004294	SRBD1	93	55.324	Astyanax_mexicanus
ENSEASG00005003132	SRBD1	97	94.904	ENSBTAG00000007508	SRBD1	99	94.937	Bos_taurus
ENSEASG00005003132	SRBD1	88	30.453	WBGene00022830	ZK973.1	94	30.155	Caenorhabditis_elegans
ENSEASG00005003132	SRBD1	97	91.083	ENSCJAG00000000727	SRBD1	100	87.450	Callithrix_jacchus
ENSEASG00005003132	SRBD1	97	94.904	ENSCAFG00000002554	SRBD1	100	89.669	Canis_familiaris
ENSEASG00005003132	SRBD1	98	94.937	ENSCAFG00020026284	SRBD1	91	98.438	Canis_lupus_dingo
ENSEASG00005003132	SRBD1	97	94.904	ENSCHIG00000016535	SRBD1	98	88.755	Capra_hircus
ENSEASG00005003132	SRBD1	97	94.268	ENSTSYG00000012797	SRBD1	100	89.279	Carlito_syrichta
ENSEASG00005003132	SRBD1	98	93.038	ENSCAPG00000014166	-	100	91.304	Cavia_aperea
ENSEASG00005003132	SRBD1	97	92.357	ENSCPOG00000004773	SRBD1	100	86.546	Cavia_porcellus
ENSEASG00005003132	SRBD1	97	93.631	ENSCCAG00000025589	SRBD1	100	88.353	Cebus_capucinus
ENSEASG00005003132	SRBD1	97	95.541	ENSCATG00000039530	SRBD1	100	89.157	Cercocebus_atys
ENSEASG00005003132	SRBD1	97	94.268	ENSCLAG00000008623	SRBD1	100	87.888	Chinchilla_lanigera
ENSEASG00005003132	SRBD1	97	95.541	ENSCSAG00000013350	SRBD1	100	89.257	Chlorocebus_sabaeus
ENSEASG00005003132	SRBD1	97	94.904	ENSCHOG00000003805	SRBD1	87	94.904	Choloepus_hoffmanni
ENSEASG00005003132	SRBD1	98	82.390	ENSCPBG00000005677	SRBD1	100	72.056	Chrysemys_picta_bellii
ENSEASG00005003132	SRBD1	94	42.091	ENSCING00000005950	-	98	41.806	Ciona_intestinalis
ENSEASG00005003132	SRBD1	94	42.303	ENSCSAVG00000000861	-	99	41.258	Ciona_savignyi
ENSEASG00005003132	SRBD1	97	94.904	ENSCANG00000016307	SRBD1	99	88.531	Colobus_angolensis_palliatus
ENSEASG00005003132	SRBD1	97	91.083	ENSCGRG00001000513	Srbd1	100	83.567	Cricetulus_griseus_chok1gshd
ENSEASG00005003132	SRBD1	97	91.083	ENSCGRG00000002283	Srbd1	100	83.567	Cricetulus_griseus_crigri
ENSEASG00005003132	SRBD1	98	54.887	ENSCSEG00000000856	si:ch211-117n7.8	94	50.621	Cynoglossus_semilaevis
ENSEASG00005003132	SRBD1	98	58.397	ENSCVAG00000020212	si:ch211-117n7.8	89	55.359	Cyprinodon_variegatus
ENSEASG00005003132	SRBD1	97	56.051	ENSDARG00000079827	srbd1	99	56.051	Danio_rerio
ENSEASG00005003132	SRBD1	97	94.904	ENSDNOG00000018686	SRBD1	100	89.089	Dasypus_novemcinctus
ENSEASG00005003132	SRBD1	97	91.083	ENSDORG00000010468	Srbd1	100	84.739	Dipodomys_ordii
ENSEASG00005003132	SRBD1	98	33.716	FBgn0051156	CG31156	98	33.704	Drosophila_melanogaster
ENSEASG00005003132	SRBD1	83	96.063	ENSETEG00000000739	SRBD1	81	96.800	Echinops_telfairi
ENSEASG00005003132	SRBD1	98	43.494	ENSEBUG00000008902	si:ch211-117n7.8	100	46.589	Eptatretus_burgeri
ENSEASG00005003132	SRBD1	97	99.363	ENSECAG00000013865	SRBD1	98	96.185	Equus_caballus
ENSEASG00005003132	SRBD1	98	57.249	ENSELUG00000012592	si:ch211-117n7.8	82	56.613	Esox_lucius
ENSEASG00005003132	SRBD1	97	94.904	ENSFCAG00000005101	SRBD1	100	91.365	Felis_catus
ENSEASG00005003132	SRBD1	97	77.070	ENSFALG00000012966	SRBD1	100	66.201	Ficedula_albicollis
ENSEASG00005003132	SRBD1	97	94.268	ENSFDAG00000016670	SRBD1	98	85.566	Fukomys_damarensis
ENSEASG00005003132	SRBD1	98	57.143	ENSFHEG00000019480	si:ch211-117n7.8	82	56.184	Fundulus_heteroclitus
ENSEASG00005003132	SRBD1	98	55.344	ENSGMOG00000018010	-	100	52.915	Gadus_morhua
ENSEASG00005003132	SRBD1	97	78.981	ENSGALG00000009990	SRBD1	100	67.465	Gallus_gallus
ENSEASG00005003132	SRBD1	98	55.513	ENSGAFG00000019664	si:ch211-117n7.8	97	49.849	Gambusia_affinis
ENSEASG00005003132	SRBD1	98	54.093	ENSGACG00000010794	si:ch211-117n7.8	100	61.920	Gasterosteus_aculeatus
ENSEASG00005003132	SRBD1	98	81.132	ENSGAGG00000006166	SRBD1	99	78.922	Gopherus_agassizii
ENSEASG00005003132	SRBD1	97	95.541	ENSGGOG00000005910	SRBD1	99	88.681	Gorilla_gorilla
ENSEASG00005003132	SRBD1	98	54.815	ENSHBUG00000013207	si:ch211-117n7.8	96	47.650	Haplochromis_burtoni
ENSEASG00005003132	SRBD1	97	92.994	ENSHGLG00000018153	-	99	86.720	Heterocephalus_glaber_female
ENSEASG00005003132	SRBD1	97	92.994	ENSHGLG00100015183	-	99	86.519	Heterocephalus_glaber_male
ENSEASG00005003132	SRBD1	97	52.866	ENSHCOG00000020901	-	99	53.165	Hippocampus_comes
ENSEASG00005003132	SRBD1	98	60.606	ENSIPUG00000009661	srbd1	95	54.180	Ictalurus_punctatus
ENSEASG00005003132	SRBD1	97	92.994	ENSSTOG00000005898	SRBD1	100	88.454	Ictidomys_tridecemlineatus
ENSEASG00005003132	SRBD1	97	88.535	ENSJJAG00000022244	Srbd1	100	78.257	Jaculus_jaculus
ENSEASG00005003132	SRBD1	98	55.263	ENSKMAG00000003473	si:ch211-117n7.8	94	50.928	Kryptolebias_marmoratus
ENSEASG00005003132	SRBD1	98	56.929	ENSLBEG00000027518	si:ch211-117n7.8	97	49.951	Labrus_bergylta
ENSEASG00005003132	SRBD1	94	72.460	ENSLACG00000009790	SRBD1	100	67.769	Latimeria_chalumnae
ENSEASG00005003132	SRBD1	97	63.694	ENSLOCG00000016360	si:ch211-117n7.8	97	56.377	Lepisosteus_oculatus
ENSEASG00005003132	SRBD1	97	92.357	ENSLAFG00000004190	-	97	89.338	Loxodonta_africana
ENSEASG00005003132	SRBD1	97	95.541	ENSMFAG00000042026	SRBD1	100	89.357	Macaca_fascicularis
ENSEASG00005003132	SRBD1	97	95.541	ENSMMUG00000003490	SRBD1	100	89.056	Macaca_mulatta
ENSEASG00005003132	SRBD1	97	95.541	ENSMNEG00000034701	SRBD1	100	86.647	Macaca_nemestrina
ENSEASG00005003132	SRBD1	97	94.904	ENSMLEG00000000745	SRBD1	100	89.056	Mandrillus_leucophaeus
ENSEASG00005003132	SRBD1	98	55.639	ENSMAMG00000021921	si:ch211-117n7.8	85	53.972	Mastacembelus_armatus
ENSEASG00005003132	SRBD1	98	54.815	ENSMZEG00005027369	si:ch211-117n7.8	94	50.307	Maylandia_zebra
ENSEASG00005003132	SRBD1	97	78.481	ENSMGAG00000010273	SRBD1	99	75.157	Meleagris_gallopavo
ENSEASG00005003132	SRBD1	97	91.083	ENSMAUG00000013916	Srbd1	92	87.984	Mesocricetus_auratus
ENSEASG00005003132	SRBD1	97	95.541	ENSMICG00000007835	SRBD1	100	90.361	Microcebus_murinus
ENSEASG00005003132	SRBD1	97	89.172	ENSMOCG00000018716	Srbd1	100	81.124	Microtus_ochrogaster
ENSEASG00005003132	SRBD1	98	58.015	ENSMMOG00000007507	si:ch211-117n7.8	82	60.976	Mola_mola
ENSEASG00005003132	SRBD1	98	55.056	ENSMALG00000001562	si:ch211-117n7.8	93	50.512	Monopterus_albus
ENSEASG00005003132	SRBD1	97	86.624	MGP_CAROLIEiJ_G0021934	Srbd1	99	84.345	Mus_caroli
ENSEASG00005003132	SRBD1	97	86.624	ENSMUSG00000024135	Srbd1	99	84.184	Mus_musculus
ENSEASG00005003132	SRBD1	97	85.350	MGP_PahariEiJ_G0020924	Srbd1	100	78.815	Mus_pahari
ENSEASG00005003132	SRBD1	97	86.624	MGP_SPRETEiJ_G0022850	Srbd1	100	80.120	Mus_spretus
ENSEASG00005003132	SRBD1	97	90.446	ENSMLUG00000007039	SRBD1	100	86.948	Myotis_lucifugus
ENSEASG00005003132	SRBD1	97	89.809	ENSNGAG00000011893	Srbd1	100	81.623	Nannospalax_galili
ENSEASG00005003132	SRBD1	98	54.074	ENSNBRG00000012873	si:ch211-117n7.8	96	50.849	Neolamprologus_brichardi
ENSEASG00005003132	SRBD1	97	94.268	ENSNLEG00000016877	SRBD1	100	88.554	Nomascus_leucogenys
ENSEASG00005003132	SRBD1	97	93.631	ENSODEG00000012095	SRBD1	100	83.835	Octodon_degus
ENSEASG00005003132	SRBD1	94	58.981	ENSONIG00000000945	si:ch211-117n7.8	99	55.675	Oreochromis_niloticus
ENSEASG00005003132	SRBD1	97	95.541	ENSOCUG00000015385	SRBD1	100	89.157	Oryctolagus_cuniculus
ENSEASG00005003132	SRBD1	94	54.928	ENSORLG00000004427	si:ch211-117n7.8	84	51.376	Oryzias_latipes
ENSEASG00005003132	SRBD1	100	54.321	ENSORLG00020012792	si:ch211-117n7.8	84	54.181	Oryzias_latipes_hni
ENSEASG00005003132	SRBD1	100	54.321	ENSORLG00015018598	si:ch211-117n7.8	84	53.961	Oryzias_latipes_hsok
ENSEASG00005003132	SRBD1	100	52.469	ENSOMEG00000012229	si:ch211-117n7.8	93	49.639	Oryzias_melastigma
ENSEASG00005003132	SRBD1	97	90.446	ENSOGAG00000001076	SRBD1	100	83.434	Otolemur_garnettii
ENSEASG00005003132	SRBD1	97	94.904	ENSOARG00000005958	SRBD1	100	84.287	Ovis_aries
ENSEASG00005003132	SRBD1	97	94.268	ENSPPAG00000038442	SRBD1	100	88.554	Pan_paniscus
ENSEASG00005003132	SRBD1	97	95.541	ENSPPRG00000003449	SRBD1	100	91.265	Panthera_pardus
ENSEASG00005003132	SRBD1	97	95.541	ENSPTIG00000012495	SRBD1	100	91.265	Panthera_tigris_altaica
ENSEASG00005003132	SRBD1	97	94.904	ENSPTRG00000011889	SRBD1	100	88.554	Pan_troglodytes
ENSEASG00005003132	SRBD1	97	94.904	ENSPANG00000008063	SRBD1	100	88.956	Papio_anubis
ENSEASG00005003132	SRBD1	94	61.312	ENSPKIG00000021973	si:ch211-117n7.8	90	62.432	Paramormyrops_kingsleyae
ENSEASG00005003132	SRBD1	97	82.166	ENSPSIG00000008992	SRBD1	100	71.900	Pelodiscus_sinensis
ENSEASG00005003132	SRBD1	98	55.263	ENSPMGG00000013348	si:ch211-117n7.8	98	49.396	Periophthalmus_magnuspinnatus
ENSEASG00005003132	SRBD1	97	91.720	ENSPEMG00000020684	Srbd1	100	80.373	Peromyscus_maniculatus_bairdii
ENSEASG00005003132	SRBD1	98	56.274	ENSPFOG00000010650	si:ch211-117n7.8	93	51.132	Poecilia_formosa
ENSEASG00005003132	SRBD1	98	56.274	ENSPLAG00000002141	si:ch211-117n7.8	93	51.184	Poecilia_latipinna
ENSEASG00005003132	SRBD1	98	56.654	ENSPMEG00000018537	si:ch211-117n7.8	93	51.440	Poecilia_mexicana
ENSEASG00005003132	SRBD1	98	55.597	ENSPREG00000003258	si:ch211-117n7.8	85	55.124	Poecilia_reticulata
ENSEASG00005003132	SRBD1	99	94.461	ENSPPYG00000012444	SRBD1	99	81.155	Pongo_abelii
ENSEASG00005003132	SRBD1	89	85.656	ENSPCAG00000005629	SRBD1	82	81.768	Procavia_capensis
ENSEASG00005003132	SRBD1	97	96.815	ENSPCOG00000017669	SRBD1	100	80.201	Propithecus_coquereli
ENSEASG00005003132	SRBD1	97	93.631	ENSPVAG00000001782	SRBD1	94	89.779	Pteropus_vampyrus
ENSEASG00005003132	SRBD1	98	54.815	ENSPNYG00000000508	si:ch211-117n7.8	96	49.737	Pundamilia_nyererei
ENSEASG00005003132	SRBD1	94	63.032	ENSPNAG00000013492	SRBD1	95	54.845	Pygocentrus_nattereri
ENSEASG00005003132	SRBD1	97	85.987	ENSRNOG00000014720	Srbd1	99	79.116	Rattus_norvegicus
ENSEASG00005003132	SRBD1	97	94.268	ENSRBIG00000033486	SRBD1	99	88.531	Rhinopithecus_bieti
ENSEASG00005003132	SRBD1	97	94.268	ENSRROG00000041599	SRBD1	99	88.531	Rhinopithecus_roxellana
ENSEASG00005003132	SRBD1	97	93.631	ENSSBOG00000024982	SRBD1	100	87.851	Saimiri_boliviensis_boliviensis
ENSEASG00005003132	SRBD1	98	57.692	ENSSFOG00015001128	si:ch211-117n7.8	90	56.856	Scleropages_formosus
ENSEASG00005003132	SRBD1	98	56.767	ENSSMAG00000018256	si:ch211-117n7.8	82	55.399	Scophthalmus_maximus
ENSEASG00005003132	SRBD1	98	56.391	ENSSLDG00000023189	si:ch211-117n7.8	96	50.202	Seriola_lalandi_dorsalis
ENSEASG00005003132	SRBD1	97	91.083	ENSSARG00000009740	SRBD1	100	77.108	Sorex_araneus
ENSEASG00005003132	SRBD1	94	80.403	ENSSPUG00000010475	SRBD1	94	75.590	Sphenodon_punctatus
ENSEASG00005003132	SRBD1	98	55.597	ENSSPAG00000008092	-	93	49.590	Stegastes_partitus
ENSEASG00005003132	SRBD1	97	56.051	ENSSPAG00000014206	-	99	54.950	Stegastes_partitus
ENSEASG00005003132	SRBD1	97	96.815	ENSSSCG00000008445	SRBD1	98	90.562	Sus_scrofa
ENSEASG00005003132	SRBD1	94	79.463	ENSTGUG00000003878	SRBD1	100	74.970	Taeniopygia_guttata
ENSEASG00005003132	SRBD1	98	56.107	ENSTRUG00000007080	si:ch211-117n7.8	98	53.025	Takifugu_rubripes
ENSEASG00005003132	SRBD1	99	53.125	ENSTNIG00000007464	si:ch211-117n7.8	97	49.245	Tetraodon_nigroviridis
ENSEASG00005003132	SRBD1	73	98.947	ENSTBEG00000004556	SRBD1	70	98.947	Tupaia_belangeri
ENSEASG00005003132	SRBD1	97	96.178	ENSTTRG00000011871	SRBD1	94	93.548	Tursiops_truncatus
ENSEASG00005003132	SRBD1	97	95.541	ENSUAMG00000008126	SRBD1	97	95.652	Ursus_americanus
ENSEASG00005003132	SRBD1	97	95.541	ENSUMAG00000012902	SRBD1	98	90.361	Ursus_maritimus
ENSEASG00005003132	SRBD1	97	97.452	ENSVPAG00000006825	SRBD1	100	90.749	Vicugna_pacos
ENSEASG00005003132	SRBD1	97	94.904	ENSVVUG00000005389	SRBD1	100	89.759	Vulpes_vulpes
ENSEASG00005003132	SRBD1	98	64.364	ENSXETG00000002760	srbd1	100	49.809	Xenopus_tropicalis
ENSEASG00005003132	SRBD1	98	55.894	ENSXMAG00000016861	si:ch211-117n7.8	93	50.823	Xiphophorus_maculatus