EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005003715 (Gene tree)
Gene ID: -
Gene Symbol: LRPPRC
Alias: GP130|LRP130|LSFC
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 108302 bases
Position: chrPSZQ01001967.1:6485652-6593953
Accession: 15714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005006708	PPR	PF01535.20	2.7e-32	1	6
ENSEASP00005006708	PPR	PF01535.20	2.7e-32	2	6
ENSEASP00005006708	PPR	PF01535.20	2.7e-32	3	6
ENSEASP00005006708	PPR	PF01535.20	2.7e-32	4	6
ENSEASP00005006708	PPR	PF01535.20	2.7e-32	5	6
ENSEASP00005006708	PPR	PF01535.20	2.7e-32	6	6
ENSEASP00005006722	PPR	PF01535.20	5.8e-32	1	6
ENSEASP00005006722	PPR	PF01535.20	5.8e-32	2	6
ENSEASP00005006722	PPR	PF01535.20	5.8e-32	3	6
ENSEASP00005006722	PPR	PF01535.20	5.8e-32	4	6
ENSEASP00005006722	PPR	PF01535.20	5.8e-32	5	6
ENSEASP00005006722	PPR	PF01535.20	5.8e-32	6	6
ENSEASP00005006718	PPR	PF01535.20	1.6e-31	1	6
ENSEASP00005006718	PPR	PF01535.20	1.6e-31	2	6
ENSEASP00005006718	PPR	PF01535.20	1.6e-31	3	6
ENSEASP00005006718	PPR	PF01535.20	1.6e-31	4	6
ENSEASP00005006718	PPR	PF01535.20	1.6e-31	5	6
ENSEASP00005006718	PPR	PF01535.20	1.6e-31	6	6
ENSEASP00005006724	PPR	PF01535.20	8e-31	1	6
ENSEASP00005006724	PPR	PF01535.20	8e-31	2	6
ENSEASP00005006724	PPR	PF01535.20	8e-31	3	6
ENSEASP00005006724	PPR	PF01535.20	8e-31	4	6
ENSEASP00005006724	PPR	PF01535.20	8e-31	5	6
ENSEASP00005006724	PPR	PF01535.20	8e-31	6	6
ENSEASP00005006672	PPR	PF01535.20	8.7e-31	1	6
ENSEASP00005006672	PPR	PF01535.20	8.7e-31	2	6
ENSEASP00005006672	PPR	PF01535.20	8.7e-31	3	6
ENSEASP00005006672	PPR	PF01535.20	8.7e-31	4	6
ENSEASP00005006672	PPR	PF01535.20	8.7e-31	5	6
ENSEASP00005006672	PPR	PF01535.20	8.7e-31	6	6
ENSEASP00005006662	PPR	PF01535.20	9.2e-31	1	6
ENSEASP00005006662	PPR	PF01535.20	9.2e-31	2	6
ENSEASP00005006662	PPR	PF01535.20	9.2e-31	3	6
ENSEASP00005006662	PPR	PF01535.20	9.2e-31	4	6
ENSEASP00005006662	PPR	PF01535.20	9.2e-31	5	6
ENSEASP00005006662	PPR	PF01535.20	9.2e-31	6	6
ENSEASP00005006674	PPR	PF01535.20	9.7e-31	1	6
ENSEASP00005006674	PPR	PF01535.20	9.7e-31	2	6
ENSEASP00005006674	PPR	PF01535.20	9.7e-31	3	6
ENSEASP00005006674	PPR	PF01535.20	9.7e-31	4	6
ENSEASP00005006674	PPR	PF01535.20	9.7e-31	5	6
ENSEASP00005006674	PPR	PF01535.20	9.7e-31	6	6
ENSEASP00005006728	PPR	PF01535.20	1.3e-30	1	6
ENSEASP00005006728	PPR	PF01535.20	1.3e-30	2	6
ENSEASP00005006728	PPR	PF01535.20	1.3e-30	3	6
ENSEASP00005006728	PPR	PF01535.20	1.3e-30	4	6
ENSEASP00005006728	PPR	PF01535.20	1.3e-30	5	6
ENSEASP00005006728	PPR	PF01535.20	1.3e-30	6	6
ENSEASP00005006714	PPR	PF01535.20	4e-30	1	6
ENSEASP00005006714	PPR	PF01535.20	4e-30	2	6
ENSEASP00005006714	PPR	PF01535.20	4e-30	3	6
ENSEASP00005006714	PPR	PF01535.20	4e-30	4	6
ENSEASP00005006714	PPR	PF01535.20	4e-30	5	6
ENSEASP00005006714	PPR	PF01535.20	4e-30	6	6
ENSEASP00005006643	PPR	PF01535.20	3.7e-29	1	6
ENSEASP00005006643	PPR	PF01535.20	3.7e-29	2	6
ENSEASP00005006643	PPR	PF01535.20	3.7e-29	3	6
ENSEASP00005006643	PPR	PF01535.20	3.7e-29	4	6
ENSEASP00005006643	PPR	PF01535.20	3.7e-29	5	6
ENSEASP00005006643	PPR	PF01535.20	3.7e-29	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005007348	LRPPRC-208	3969	-	ENSEASP00005006722	1322 (aa)	-	-
ENSEAST00005007264	LRPPRC-201	4182	-	ENSEASP00005006643	1393 (aa)	-	-
ENSEAST00005007296	LRPPRC-204	4098	-	ENSEASP00005006674	1365 (aa)	-	-
ENSEAST00005007284	LRPPRC-202	4179	-	ENSEASP00005006662	1392 (aa)	-	-
ENSEAST00005007294	LRPPRC-203	4173	-	ENSEASP00005006672	1390 (aa)	-	-
ENSEAST00005007354	LRPPRC-210	3807	-	ENSEASP00005006728	1268 (aa)	-	-
ENSEAST00005007344	LRPPRC-207	3894	-	ENSEASP00005006718	1297 (aa)	-	-
ENSEAST00005007350	LRPPRC-209	4149	-	ENSEASP00005006724	1382 (aa)	-	-
ENSEAST00005007340	LRPPRC-206	3870	-	ENSEASP00005006714	1289 (aa)	-	-
ENSEAST00005007334	LRPPRC-205	3747	-	ENSEASP00005006708	1248 (aa)	-	-

Gene Model

Click here to download ENSEASG00005003715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005003715's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005003715	LRPPRC	99	82.268	ENSG00000138095	LRPPRC	97	85.632	Homo_sapiens
ENSEASG00005003715	LRPPRC	99	56.937	ENSAPLG00000008902	LRPPRC	100	59.181	Anas_platyrhynchos
ENSEASG00005003715	LRPPRC	100	88.395	ENSBTAG00000016368	LRPPRC	100	88.522	Bos_taurus
ENSEASG00005003715	LRPPRC	100	87.446	ENSCAFG00000002527	LRPPRC	100	87.446	Canis_familiaris
ENSEASG00005003715	LRPPRC	100	86.867	ENSCAFG00020025995	LRPPRC	100	87.009	Canis_lupus_dingo
ENSEASG00005003715	LRPPRC	97	86.979	ENSTSYG00000013197	LRPPRC	96	87.054	Carlito_syrichta
ENSEASG00005003715	LRPPRC	99	64.403	ENSCPBG00000005446	LRPPRC	99	66.770	Chrysemys_picta_bellii
ENSEASG00005003715	LRPPRC	82	32.155	FBgn0284256	bsf	78	32.332	Drosophila_melanogaster
ENSEASG00005003715	LRPPRC	99	98.051	ENSECAG00000023814	LRPPRC	96	98.051	Equus_caballus
ENSEASG00005003715	LRPPRC	99	56.672	ENSGALG00000009967	LRPPRC	99	56.810	Gallus_gallus
ENSEASG00005003715	LRPPRC	99	64.099	ENSGAGG00000020227	LRPPRC	98	65.164	Gopherus_agassizii
ENSEASG00005003715	LRPPRC	99	83.250	ENSMLEG00000043673	LRPPRC	99	84.280	Mandrillus_leucophaeus
ENSEASG00005003715	LRPPRC	99	57.218	ENSMGAG00000010201	LRPPRC	99	58.500	Meleagris_gallopavo
ENSEASG00005003715	LRPPRC	99	78.336	MGP_CAROLIEiJ_G0021927	Lrpprc	99	78.479	Mus_caroli
ENSEASG00005003715	LRPPRC	99	78.910	ENSMUSG00000024120	Lrpprc	99	79.053	Mus_musculus
ENSEASG00005003715	LRPPRC	99	79.770	MGP_PahariEiJ_G0020917	Lrpprc	99	79.914	Mus_pahari
ENSEASG00005003715	LRPPRC	99	79.197	MGP_SPRETEiJ_G0022843	Lrpprc	99	79.340	Mus_spretus
ENSEASG00005003715	LRPPRC	87	56.498	ENSMEUG00000004430	-	93	56.498	Notamacropus_eugenii
ENSEASG00005003715	LRPPRC	99	80.201	ENSPEMG00000022720	Lrpprc	99	80.273	Peromyscus_maniculatus_bairdii
ENSEASG00005003715	LRPPRC	99	70.236	ENSPCIG00000006872	LRPPRC	99	70.021	Phascolarctos_cinereus
ENSEASG00005003715	LRPPRC	100	86.175	ENSPCOG00000001309	LRPPRC	99	88.068	Propithecus_coquereli
ENSEASG00005003715	LRPPRC	93	58.507	ENSSPUG00000005188	LRPPRC	99	60.737	Sphenodon_punctatus
ENSEASG00005003715	LRPPRC	67	87.330	ENSTBEG00000011055	-	66	87.330	Tupaia_belangeri
ENSEASG00005003715	LRPPRC	99	87.733	ENSUAMG00000022940	LRPPRC	99	87.733	Ursus_americanus
ENSEASG00005003715	LRPPRC	99	87.446	ENSUMAG00000012801	LRPPRC	99	87.969	Ursus_maritimus
ENSEASG00005003715	LRPPRC	100	86.863	ENSVVUG00000002339	LRPPRC	100	86.863	Vulpes_vulpes