EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005003857 (Gene tree)
Gene ID: -
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 12446 bases
Position: chrPSZQ01002066.1:20056943-20069388
Accession: 6916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005005324	MBD	PF01429.19	3.2e-16	1	1
ENSEASP00005005325	MBD	PF01429.19	3.3e-16	1	1
ENSEASP00005005287	MBD	PF01429.19	3.6e-16	1	1
ENSEASP00005005322	MBD	PF01429.19	3.8e-16	1	1
ENSEASP00005005285	MBD	PF01429.19	3.8e-16	1	1
ENSEASP00005005286	MBD	PF01429.19	3.9e-16	1	1
ENSEASP00005005306	MBD	PF01429.19	4e-16	1	1
ENSEASP00005005281	MBD	PF01429.19	4.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005005827	MBD1-208	1635	-	ENSEASP00005005325	544 (aa)	-	-
ENSEAST00005005826	MBD1-207	1662	-	ENSEASP00005005324	553 (aa)	-	-
ENSEAST00005005824	MBD1-206	1773	-	ENSEASP00005005322	590 (aa)	-	-
ENSEAST00005005808	MBD1-205	1884	-	ENSEASP00005005306	627 (aa)	-	UPI00071A305B
ENSEAST00005005788	MBD1-203	1959	-	ENSEASP00005005286	652 (aa)	-	UPI00071A6D49
ENSEAST00005005789	MBD1-204	1791	-	ENSEASP00005005287	596 (aa)	-	-
ENSEAST00005005783	MBD1-201	1917	-	ENSEASP00005005281	638 (aa)	-	UPI00071A1D5C
ENSEAST00005005787	MBD1-202	1746	-	ENSEASP00005005285	581 (aa)	-	-

Gene Model

Click here to download ENSEASG00005003857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005003857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005003857	MBD1	100	88.280	ENSG00000141644	MBD1	99	92.708	Homo_sapiens
ENSEASG00005003857	MBD1	100	91.614	ENSAMEG00000000238	MBD1	96	91.614	Ailuropoda_melanoleuca
ENSEASG00005003857	MBD1	80	30.204	ENSACIG00000010590	mbd1b	51	36.872	Amphilophus_citrinellus
ENSEASG00005003857	MBD1	50	52.809	ENSAOCG00000020272	mbd1b	52	33.186	Amphiprion_ocellaris
ENSEASG00005003857	MBD1	50	52.809	ENSAPEG00000023230	mbd1b	52	33.186	Amphiprion_percula
ENSEASG00005003857	MBD1	74	33.173	ENSATEG00000009608	mbd1b	52	34.450	Anabas_testudineus
ENSEASG00005003857	MBD1	68	43.069	ENSACAG00000006091	-	100	43.584	Anolis_carolinensis
ENSEASG00005003857	MBD1	100	87.671	ENSANAG00000036253	MBD1	100	86.149	Aotus_nancymaae
ENSEASG00005003857	MBD1	100	90.348	ENSBTAG00000003801	MBD1	100	90.348	Bos_taurus
ENSEASG00005003857	MBD1	100	87.215	ENSCJAG00000004959	MBD1	100	85.693	Callithrix_jacchus
ENSEASG00005003857	MBD1	100	92.803	ENSCAFG00000018928	MBD1	96	90.981	Canis_familiaris
ENSEASG00005003857	MBD1	100	91.135	ENSCAFG00020024272	MBD1	100	90.980	Canis_lupus_dingo
ENSEASG00005003857	MBD1	100	90.190	ENSCHIG00000021134	MBD1	100	90.190	Capra_hircus
ENSEASG00005003857	MBD1	100	85.692	ENSTSYG00000000509	MBD1	100	87.184	Carlito_syrichta
ENSEASG00005003857	MBD1	92	69.730	ENSCAPG00000015782	MBD1	98	68.649	Cavia_aperea
ENSEASG00005003857	MBD1	100	73.378	ENSCPOG00000001671	MBD1	100	71.381	Cavia_porcellus
ENSEASG00005003857	MBD1	100	84.627	ENSCCAG00000034600	MBD1	100	84.627	Cebus_capucinus
ENSEASG00005003857	MBD1	100	88.291	ENSCATG00000029959	MBD1	100	86.709	Cercocebus_atys
ENSEASG00005003857	MBD1	100	84.810	ENSCLAG00000007457	MBD1	89	84.810	Chinchilla_lanigera
ENSEASG00005003857	MBD1	100	84.810	ENSCSAG00000018070	MBD1	100	84.488	Chlorocebus_sabaeus
ENSEASG00005003857	MBD1	100	88.291	ENSCANG00000033425	MBD1	100	86.709	Colobus_angolensis_palliatus
ENSEASG00005003857	MBD1	100	72.162	ENSCGRG00001014843	Mbd1	100	72.162	Cricetulus_griseus_chok1gshd
ENSEASG00005003857	MBD1	100	60.374	ENSCGRG00000014135	Mbd1	86	77.826	Cricetulus_griseus_crigri
ENSEASG00005003857	MBD1	51	50.538	ENSCVAG00000001167	mbd1b	51	31.616	Cyprinodon_variegatus
ENSEASG00005003857	MBD1	100	83.463	ENSDNOG00000015998	MBD1	100	84.399	Dasypus_novemcinctus
ENSEASG00005003857	MBD1	92	74.773	ENSDORG00000013917	Mbd1	100	77.119	Dipodomys_ordii
ENSEASG00005003857	MBD1	100	99.687	ENSECAG00000011497	MBD1	81	99.687	Equus_caballus
ENSEASG00005003857	MBD1	92	52.174	ENSELUG00000004375	mbd1b	50	32.468	Esox_lucius
ENSEASG00005003857	MBD1	100	92.224	ENSFCAG00000015730	MBD1	100	92.089	Felis_catus
ENSEASG00005003857	MBD1	89	78.967	ENSFDAG00000011085	MBD1	94	78.598	Fukomys_damarensis
ENSEASG00005003857	MBD1	66	31.840	ENSFHEG00000020120	mbd1b	51	32.304	Fundulus_heteroclitus
ENSEASG00005003857	MBD1	54	52.308	ENSGAFG00000008975	mbd1b	53	36.869	Gambusia_affinis
ENSEASG00005003857	MBD1	68	33.071	ENSGACG00000012106	-	58	31.733	Gasterosteus_aculeatus
ENSEASG00005003857	MBD1	100	88.133	ENSGGOG00000016966	MBD1	100	86.606	Gorilla_gorilla
ENSEASG00005003857	MBD1	100	85.601	ENSHGLG00000008740	MBD1	100	85.601	Heterocephalus_glaber_female
ENSEASG00005003857	MBD1	84	89.251	ENSHGLG00100005198	MBD1	100	89.216	Heterocephalus_glaber_male
ENSEASG00005003857	MBD1	67	30.626	ENSHCOG00000009952	mbd1b	53	30.824	Hippocampus_comes
ENSEASG00005003857	MBD1	61	36.747	ENSIPUG00000015243	-	50	38.037	Ictalurus_punctatus
ENSEASG00005003857	MBD1	100	78.867	ENSSTOG00000007780	MBD1	100	78.768	Ictidomys_tridecemlineatus
ENSEASG00005003857	MBD1	90	76.199	ENSJJAG00000022859	Mbd1	96	76.568	Jaculus_jaculus
ENSEASG00005003857	MBD1	69	33.184	ENSKMAG00000020760	mbd1b	54	34.928	Kryptolebias_marmoratus
ENSEASG00005003857	MBD1	96	35.634	ENSLACG00000002414	-	52	62.500	Latimeria_chalumnae
ENSEASG00005003857	MBD1	100	74.537	ENSLAFG00000031328	MBD1	100	73.611	Loxodonta_africana
ENSEASG00005003857	MBD1	100	87.975	ENSMFAG00000026335	MBD1	100	86.392	Macaca_fascicularis
ENSEASG00005003857	MBD1	100	87.975	ENSMMUG00000009050	MBD1	100	86.392	Macaca_mulatta
ENSEASG00005003857	MBD1	100	87.975	ENSMNEG00000038822	MBD1	100	86.392	Macaca_nemestrina
ENSEASG00005003857	MBD1	100	88.291	ENSMLEG00000043121	MBD1	100	86.709	Mandrillus_leucophaeus
ENSEASG00005003857	MBD1	72	37.500	ENSMAMG00000023341	-	55	51.042	Mastacembelus_armatus
ENSEASG00005003857	MBD1	100	85.624	ENSMICG00000006414	MBD1	100	85.466	Microcebus_murinus
ENSEASG00005003857	MBD1	51	75.714	ENSMOCG00000011976	-	97	76.727	Microtus_ochrogaster
ENSEASG00005003857	MBD1	70	40.988	ENSMODG00000001286	-	58	43.358	Monodelphis_domestica
ENSEASG00005003857	MBD1	52	47.423	ENSMALG00000007808	mbd1b	52	34.615	Monopterus_albus
ENSEASG00005003857	MBD1	100	65.676	ENSMUSG00000024561	Mbd1	100	64.636	Mus_musculus
ENSEASG00005003857	MBD1	100	65.446	MGP_PahariEiJ_G0019128	Mbd1	100	65.764	Mus_pahari
ENSEASG00005003857	MBD1	98	67.264	MGP_SPRETEiJ_G0023304	Mbd1	99	68.669	Mus_spretus
ENSEASG00005003857	MBD1	100	90.808	ENSMPUG00000008843	MBD1	96	90.808	Mustela_putorius_furo
ENSEASG00005003857	MBD1	100	90.016	ENSMLUG00000008286	MBD1	96	90.174	Myotis_lucifugus
ENSEASG00005003857	MBD1	92	73.936	ENSNGAG00000011412	Mbd1	98	73.759	Nannospalax_galili
ENSEASG00005003857	MBD1	100	87.342	ENSNLEG00000011661	-	100	85.918	Nomascus_leucogenys
ENSEASG00005003857	MBD1	100	79.534	ENSNLEG00000032711	-	100	77.205	Nomascus_leucogenys
ENSEASG00005003857	MBD1	100	71.736	ENSOPRG00000007647	MBD1	100	71.736	Ochotona_princeps
ENSEASG00005003857	MBD1	92	80.944	ENSODEG00000018451	MBD1	98	80.944	Octodon_degus
ENSEASG00005003857	MBD1	61	32.821	ENSONIG00000020289	mbd1b	51	32.176	Oreochromis_niloticus
ENSEASG00005003857	MBD1	92	45.369	ENSOANG00000014593	-	100	48.868	Ornithorhynchus_anatinus
ENSEASG00005003857	MBD1	100	83.861	ENSOCUG00000006554	MBD1	100	83.861	Oryctolagus_cuniculus
ENSEASG00005003857	MBD1	100	84.087	ENSOGAG00000003784	MBD1	96	82.812	Otolemur_garnettii
ENSEASG00005003857	MBD1	100	90.047	ENSOARG00000004218	MBD1	95	90.047	Ovis_aries
ENSEASG00005003857	MBD1	100	87.976	ENSPPAG00000038886	MBD1	100	86.454	Pan_paniscus
ENSEASG00005003857	MBD1	100	92.247	ENSPPRG00000021387	MBD1	100	92.247	Panthera_pardus
ENSEASG00005003857	MBD1	100	92.089	ENSPTIG00000021231	MBD1	100	92.089	Panthera_tigris_altaica
ENSEASG00005003857	MBD1	100	87.975	ENSPTRG00000010021	MBD1	100	86.392	Pan_troglodytes
ENSEASG00005003857	MBD1	100	88.432	ENSPANG00000010867	MBD1	100	86.910	Papio_anubis
ENSEASG00005003857	MBD1	100	58.824	ENSPEMG00000022630	Mbd1	98	65.789	Peromyscus_maniculatus_bairdii
ENSEASG00005003857	MBD1	96	46.967	ENSPCIG00000027937	-	79	48.007	Phascolarctos_cinereus
ENSEASG00005003857	MBD1	82	53.846	ENSPFOG00000007511	mbd1b	53	36.869	Poecilia_formosa
ENSEASG00005003857	MBD1	54	53.846	ENSPLAG00000021258	mbd1b	53	36.869	Poecilia_latipinna
ENSEASG00005003857	MBD1	55	53.846	ENSPMEG00000024145	mbd1b	51	53.261	Poecilia_mexicana
ENSEASG00005003857	MBD1	54	53.846	ENSPREG00000021805	mbd1b	53	35.961	Poecilia_reticulata
ENSEASG00005003857	MBD1	100	84.652	ENSPPYG00000009158	MBD1	91	84.323	Pongo_abelii
ENSEASG00005003857	MBD1	99	78.182	ENSPCAG00000001648	MBD1	93	87.500	Procavia_capensis
ENSEASG00005003857	MBD1	99	88.567	ENSPCOG00000012450	MBD1	99	88.415	Propithecus_coquereli
ENSEASG00005003857	MBD1	90	31.503	ENSPNAG00000018075	mbd1b	67	31.287	Pygocentrus_nattereri
ENSEASG00005003857	MBD1	99	51.910	ENSRNOG00000024104	Mbd1	98	62.937	Rattus_norvegicus
ENSEASG00005003857	MBD1	100	87.097	ENSRBIG00000041294	MBD1	100	85.305	Rhinopithecus_bieti
ENSEASG00005003857	MBD1	100	87.816	ENSRROG00000032517	MBD1	100	86.234	Rhinopithecus_roxellana
ENSEASG00005003857	MBD1	100	87.367	ENSSBOG00000027169	MBD1	100	85.693	Saimiri_boliviensis_boliviensis
ENSEASG00005003857	MBD1	82	44.540	ENSSHAG00000003661	-	100	46.383	Sarcophilus_harrisii
ENSEASG00005003857	MBD1	50	50.562	ENSSPAG00000021447	mbd1b	54	32.394	Stegastes_partitus
ENSEASG00005003857	MBD1	100	87.558	ENSSSCG00000004516	MBD1	100	86.003	Sus_scrofa
ENSEASG00005003857	MBD1	72	34.389	ENSTRUG00000013422	mbd1b	53	30.876	Takifugu_rubripes
ENSEASG00005003857	MBD1	74	80.000	ENSTBEG00000012651	-	68	80.000	Tupaia_belangeri
ENSEASG00005003857	MBD1	100	84.494	ENSTTRG00000015523	MBD1	98	88.889	Tursiops_truncatus
ENSEASG00005003857	MBD1	100	86.625	ENSUAMG00000004752	MBD1	100	86.936	Ursus_americanus
ENSEASG00005003857	MBD1	99	90.620	ENSUMAG00000002947	MBD1	98	91.246	Ursus_maritimus
ENSEASG00005003857	MBD1	54	53.846	ENSXMAG00000005628	mbd1b	52	35.961	Xiphophorus_maculatus