EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005004050 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 6937 bases
Position: chrPSZQ01006265.1:1023787-1030723
Accession: 25980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005005476	zf-CCCH	PF00642.24	8.2e-06	1	1
ENSEASP00005005476	TRM	PF02005.16	1.4e-148	1	1
ENSEASP00005005476	Met_10	PF02475.16	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005005983	TRMT1-201	1959	-	ENSEASP00005005476	637 (aa)	-	UPI00071A590F

Gene Model

Click here to download ENSEASG00005004050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005004050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005004050	TRMT1	97	88.567	ENSG00000104907	TRMT1	100	92.670	Homo_sapiens
ENSEASG00005004050	TRMT1	100	87.912	ENSAMEG00000012598	TRMT1	93	88.141	Ailuropoda_melanoleuca
ENSEASG00005004050	TRMT1	94	56.885	ENSACIG00000018680	trmt1	94	56.885	Amphilophus_citrinellus
ENSEASG00005004050	TRMT1	90	65.972	ENSAOCG00000006781	trmt1	86	65.972	Amphiprion_ocellaris
ENSEASG00005004050	TRMT1	90	65.972	ENSAPEG00000007712	trmt1	86	65.972	Amphiprion_percula
ENSEASG00005004050	TRMT1	90	67.776	ENSATEG00000001872	trmt1	84	67.776	Anabas_testudineus
ENSEASG00005004050	TRMT1	91	67.347	ENSACAG00000003825	TRMT1	94	67.347	Anolis_carolinensis
ENSEASG00005004050	TRMT1	99	83.677	ENSANAG00000023016	TRMT1	98	85.784	Aotus_nancymaae
ENSEASG00005004050	TRMT1	90	64.572	ENSACLG00000010073	trmt1	92	64.398	Astatotilapia_calliptera
ENSEASG00005004050	TRMT1	90	67.014	ENSAMXG00000012026	trmt1	85	67.014	Astyanax_mexicanus
ENSEASG00005004050	TRMT1	100	86.970	ENSBTAG00000019325	TRMT1	89	87.500	Bos_taurus
ENSEASG00005004050	TRMT1	83	39.963	WBGene00006613	trm-1	96	39.665	Caenorhabditis_elegans
ENSEASG00005004050	TRMT1	99	82.278	ENSCJAG00000004566	TRMT1	96	82.456	Callithrix_jacchus
ENSEASG00005004050	TRMT1	100	89.168	ENSCAFG00000017070	TRMT1	98	89.263	Canis_familiaris
ENSEASG00005004050	TRMT1	99	87.898	ENSCAFG00020005397	TRMT1	94	87.356	Canis_lupus_dingo
ENSEASG00005004050	TRMT1	100	86.677	ENSCHIG00000013569	TRMT1	94	87.200	Capra_hircus
ENSEASG00005004050	TRMT1	98	82.588	ENSTSYG00000003207	TRMT1	95	82.588	Carlito_syrichta
ENSEASG00005004050	TRMT1	88	78.648	ENSCAPG00000003355	TRMT1	97	78.995	Cavia_aperea
ENSEASG00005004050	TRMT1	98	82.109	ENSCPOG00000011754	TRMT1	94	82.448	Cavia_porcellus
ENSEASG00005004050	TRMT1	99	82.035	ENSCCAG00000022263	TRMT1	98	83.961	Cebus_capucinus
ENSEASG00005004050	TRMT1	100	87.598	ENSCATG00000039850	TRMT1	94	87.981	Cercocebus_atys
ENSEASG00005004050	TRMT1	87	73.150	ENSCATG00000038220	-	95	73.150	Cercocebus_atys
ENSEASG00005004050	TRMT1	98	85.577	ENSCLAG00000015295	TRMT1	97	82.080	Chinchilla_lanigera
ENSEASG00005004050	TRMT1	79	89.505	ENSCSAG00000006500	TRMT1	95	89.505	Chlorocebus_sabaeus
ENSEASG00005004050	TRMT1	93	67.953	ENSCPBG00000023866	TRMT1	87	68.792	Chrysemys_picta_bellii
ENSEASG00005004050	TRMT1	87	46.441	ENSCING00000002884	-	98	46.441	Ciona_intestinalis
ENSEASG00005004050	TRMT1	86	46.751	ENSCSAVG00000010927	-	100	46.950	Ciona_savignyi
ENSEASG00005004050	TRMT1	95	67.434	ENSCANG00000031650	-	94	67.434	Colobus_angolensis_palliatus
ENSEASG00005004050	TRMT1	100	71.987	ENSCANG00000040631	TRMT1	95	72.045	Colobus_angolensis_palliatus
ENSEASG00005004050	TRMT1	99	81.918	ENSCGRG00001022594	Trmt1	94	83.252	Cricetulus_griseus_chok1gshd
ENSEASG00005004050	TRMT1	99	81.918	ENSCGRG00000017732	Trmt1	92	83.252	Cricetulus_griseus_crigri
ENSEASG00005004050	TRMT1	90	65.969	ENSCSEG00000001643	trmt1	84	68.031	Cynoglossus_semilaevis
ENSEASG00005004050	TRMT1	90	67.075	ENSCVAG00000011886	trmt1	85	67.075	Cyprinodon_variegatus
ENSEASG00005004050	TRMT1	90	65.749	ENSDARG00000010978	trmt1	85	65.749	Danio_rerio
ENSEASG00005004050	TRMT1	87	61.607	ENSDNOG00000048240	-	92	62.063	Dasypus_novemcinctus
ENSEASG00005004050	TRMT1	100	81.818	ENSDORG00000014298	Trmt1	95	82.240	Dipodomys_ordii
ENSEASG00005004050	TRMT1	85	45.833	FBgn0032430	CG6388	93	45.833	Drosophila_melanogaster
ENSEASG00005004050	TRMT1	54	84.701	ENSETEG00000015483	-	50	84.701	Echinops_telfairi
ENSEASG00005004050	TRMT1	81	53.191	ENSEBUG00000003449	trmt1	76	53.053	Eptatretus_burgeri
ENSEASG00005004050	TRMT1	100	99.686	ENSECAG00000016149	TRMT1	100	99.686	Equus_caballus
ENSEASG00005004050	TRMT1	62	70.529	ENSEEUG00000014102	-	100	70.529	Erinaceus_europaeus
ENSEASG00005004050	TRMT1	94	61.688	ENSELUG00000021659	trmt1	91	61.688	Esox_lucius
ENSEASG00005004050	TRMT1	100	88.383	ENSFCAG00000000483	TRMT1	95	88.462	Felis_catus
ENSEASG00005004050	TRMT1	99	83.203	ENSFDAG00000007386	TRMT1	94	83.949	Fukomys_damarensis
ENSEASG00005004050	TRMT1	91	64.605	ENSFHEG00000012865	trmt1	89	67.724	Fundulus_heteroclitus
ENSEASG00005004050	TRMT1	90	59.441	ENSGMOG00000006564	trmt1	98	59.686	Gadus_morhua
ENSEASG00005004050	TRMT1	95	64.860	ENSGAFG00000011862	trmt1	94	65.246	Gambusia_affinis
ENSEASG00005004050	TRMT1	91	62.628	ENSGACG00000000227	trmt1	94	62.628	Gasterosteus_aculeatus
ENSEASG00005004050	TRMT1	96	67.427	ENSGAGG00000016432	TRMT1	89	67.427	Gopherus_agassizii
ENSEASG00005004050	TRMT1	97	88.889	ENSGGOG00000014007	TRMT1	94	88.889	Gorilla_gorilla
ENSEASG00005004050	TRMT1	91	57.414	ENSHBUG00000008821	trmt1	95	57.414	Haplochromis_burtoni
ENSEASG00005004050	TRMT1	99	83.254	ENSHGLG00000015972	TRMT1	95	83.654	Heterocephalus_glaber_female
ENSEASG00005004050	TRMT1	99	77.445	ENSHGLG00100018112	TRMT1	95	77.760	Heterocephalus_glaber_male
ENSEASG00005004050	TRMT1	90	63.923	ENSHCOG00000009447	trmt1	88	63.923	Hippocampus_comes
ENSEASG00005004050	TRMT1	90	66.267	ENSIPUG00000002899	trmt1	85	66.267	Ictalurus_punctatus
ENSEASG00005004050	TRMT1	100	85.423	ENSSTOG00000012531	TRMT1	95	86.151	Ictidomys_tridecemlineatus
ENSEASG00005004050	TRMT1	93	84.175	ENSJJAG00000017154	Trmt1	94	82.602	Jaculus_jaculus
ENSEASG00005004050	TRMT1	90	67.250	ENSKMAG00000011809	trmt1	95	65.849	Kryptolebias_marmoratus
ENSEASG00005004050	TRMT1	90	65.849	ENSLBEG00000012703	trmt1	84	65.849	Labrus_bergylta
ENSEASG00005004050	TRMT1	90	58.478	ENSLACG00000014585	TRMT1	96	57.647	Latimeria_chalumnae
ENSEASG00005004050	TRMT1	90	62.241	ENSLOCG00000006479	trmt1	97	62.414	Lepisosteus_oculatus
ENSEASG00005004050	TRMT1	98	85.805	ENSLAFG00000014072	TRMT1	93	88.264	Loxodonta_africana
ENSEASG00005004050	TRMT1	100	87.755	ENSMFAG00000033143	TRMT1	94	88.141	Macaca_fascicularis
ENSEASG00005004050	TRMT1	100	81.534	ENSMMUG00000001167	TRMT1	95	81.789	Macaca_mulatta
ENSEASG00005004050	TRMT1	100	87.598	ENSMNEG00000037867	TRMT1	94	87.981	Macaca_nemestrina
ENSEASG00005004050	TRMT1	100	87.127	ENSMLEG00000016142	TRMT1	95	87.500	Mandrillus_leucophaeus
ENSEASG00005004050	TRMT1	90	67.308	ENSMAMG00000004357	trmt1	85	67.308	Mastacembelus_armatus
ENSEASG00005004050	TRMT1	94	62.397	ENSMZEG00005014510	trmt1	91	62.397	Maylandia_zebra
ENSEASG00005004050	TRMT1	98	82.080	ENSMAUG00000011134	Trmt1	93	82.419	Mesocricetus_auratus
ENSEASG00005004050	TRMT1	99	87.736	ENSMICG00000000793	TRMT1	94	87.801	Microcebus_murinus
ENSEASG00005004050	TRMT1	97	82.448	ENSMOCG00000015895	Trmt1	93	83.089	Microtus_ochrogaster
ENSEASG00005004050	TRMT1	90	66.200	ENSMMOG00000011097	trmt1	92	66.200	Mola_mola
ENSEASG00005004050	TRMT1	96	75.772	ENSMODG00000011619	TRMT1	99	75.772	Monodelphis_domestica
ENSEASG00005004050	TRMT1	100	81.279	MGP_CAROLIEiJ_G0031304	Trmt1	100	81.749	Mus_caroli
ENSEASG00005004050	TRMT1	100	81.123	ENSMUSG00000001909	Trmt1	100	80.989	Mus_musculus
ENSEASG00005004050	TRMT1	100	80.967	MGP_SPRETEiJ_G0032422	Trmt1	100	80.989	Mus_spretus
ENSEASG00005004050	TRMT1	100	87.284	ENSMPUG00000004210	TRMT1	89	87.340	Mustela_putorius_furo
ENSEASG00005004050	TRMT1	100	88.697	ENSMLUG00000012809	TRMT1	93	89.085	Myotis_lucifugus
ENSEASG00005004050	TRMT1	99	80.878	ENSNGAG00000022486	Trmt1	94	81.280	Nannospalax_galili
ENSEASG00005004050	TRMT1	78	68.249	ENSNBRG00000024376	trmt1	85	68.249	Neolamprologus_brichardi
ENSEASG00005004050	TRMT1	78	88.365	ENSNLEG00000013019	-	93	88.365	Nomascus_leucogenys
ENSEASG00005004050	TRMT1	94	75.084	ENSMEUG00000013756	TRMT1	100	75.084	Notamacropus_eugenii
ENSEASG00005004050	TRMT1	82	84.045	ENSOPRG00000009471	-	76	86.525	Ochotona_princeps
ENSEASG00005004050	TRMT1	98	83.892	ENSODEG00000010323	TRMT1	94	84.355	Octodon_degus
ENSEASG00005004050	TRMT1	94	65.829	ENSONIG00000000400	trmt1	95	65.829	Oreochromis_niloticus
ENSEASG00005004050	TRMT1	79	87.723	ENSOCUG00000021934	TRMT1	95	87.723	Oryctolagus_cuniculus
ENSEASG00005004050	TRMT1	90	60.616	ENSORLG00000020074	trmt1	90	60.616	Oryzias_latipes
ENSEASG00005004050	TRMT1	90	64.286	ENSORLG00020007561	trmt1	90	64.111	Oryzias_latipes_hni
ENSEASG00005004050	TRMT1	90	64.634	ENSORLG00015006547	trmt1	86	64.634	Oryzias_latipes_hsok
ENSEASG00005004050	TRMT1	95	63.279	ENSOMEG00000019343	trmt1	92	63.279	Oryzias_melastigma
ENSEASG00005004050	TRMT1	97	85.113	ENSOGAG00000025576	TRMT1	97	85.113	Otolemur_garnettii
ENSEASG00005004050	TRMT1	100	71.607	ENSOARG00000009397	TRMT1	88	71.975	Ovis_aries
ENSEASG00005004050	TRMT1	100	80.063	ENSPPRG00000012117	TRMT1	96	80.128	Panthera_pardus
ENSEASG00005004050	TRMT1	78	91.456	ENSPTIG00000008833	TRMT1	92	91.456	Panthera_tigris_altaica
ENSEASG00005004050	TRMT1	99	66.349	ENSPTRG00000050421	-	94	66.071	Pan_troglodytes
ENSEASG00005004050	TRMT1	97	88.728	ENSPTRG00000010557	TRMT1	94	88.728	Pan_troglodytes
ENSEASG00005004050	TRMT1	100	87.755	ENSPANG00000009247	TRMT1	94	88.141	Papio_anubis
ENSEASG00005004050	TRMT1	98	62.460	ENSPANG00000034058	-	94	61.889	Papio_anubis
ENSEASG00005004050	TRMT1	90	68.118	ENSPKIG00000005309	trmt1	84	68.118	Paramormyrops_kingsleyae
ENSEASG00005004050	TRMT1	91	58.491	ENSPSIG00000008762	TRMT1	83	58.491	Pelodiscus_sinensis
ENSEASG00005004050	TRMT1	90	65.849	ENSPMGG00000019764	trmt1	90	65.849	Periophthalmus_magnuspinnatus
ENSEASG00005004050	TRMT1	97	83.548	ENSPEMG00000016247	Trmt1	93	83.548	Peromyscus_maniculatus_bairdii
ENSEASG00005004050	TRMT1	92	57.804	ENSPMAG00000004329	trmt1	91	57.804	Petromyzon_marinus
ENSEASG00005004050	TRMT1	96	75.246	ENSPCIG00000019273	TRMT1	96	74.396	Phascolarctos_cinereus
ENSEASG00005004050	TRMT1	91	67.802	ENSPFOG00000008527	trmt1	90	67.802	Poecilia_formosa
ENSEASG00005004050	TRMT1	95	65.738	ENSPLAG00000018788	trmt1	89	69.811	Poecilia_latipinna
ENSEASG00005004050	TRMT1	94	66.116	ENSPMEG00000013120	trmt1	93	66.118	Poecilia_mexicana
ENSEASG00005004050	TRMT1	90	67.304	ENSPREG00000000211	trmt1	85	67.708	Poecilia_reticulata
ENSEASG00005004050	TRMT1	97	88.567	ENSPPYG00000009622	TRMT1	94	88.567	Pongo_abelii
ENSEASG00005004050	TRMT1	99	78.060	ENSPCAG00000003698	TRMT1	96	78.205	Procavia_capensis
ENSEASG00005004050	TRMT1	99	87.421	ENSPCOG00000008653	TRMT1	95	87.801	Propithecus_coquereli
ENSEASG00005004050	TRMT1	100	88.697	ENSPVAG00000015076	TRMT1	95	88.782	Pteropus_vampyrus
ENSEASG00005004050	TRMT1	90	63.525	ENSPNYG00000013960	trmt1	92	63.525	Pundamilia_nyererei
ENSEASG00005004050	TRMT1	84	68.267	ENSPNAG00000024859	trmt1	88	68.267	Pygocentrus_nattereri
ENSEASG00005004050	TRMT1	100	80.967	ENSRNOG00000002914	Trmt1	97	82.419	Rattus_norvegicus
ENSEASG00005004050	TRMT1	100	87.441	ENSRBIG00000038324	TRMT1	94	87.821	Rhinopithecus_bieti
ENSEASG00005004050	TRMT1	95	68.525	ENSRBIG00000037505	-	95	68.525	Rhinopithecus_bieti
ENSEASG00005004050	TRMT1	95	67.869	ENSRROG00000031847	-	94	67.869	Rhinopithecus_roxellana
ENSEASG00005004050	TRMT1	100	87.284	ENSRROG00000028599	TRMT1	94	87.660	Rhinopithecus_roxellana
ENSEASG00005004050	TRMT1	80	36.989	YDR120C	-	92	37.175	Saccharomyces_cerevisiae
ENSEASG00005004050	TRMT1	100	81.476	ENSSBOG00000028861	TRMT1	98	83.797	Saimiri_boliviensis_boliviensis
ENSEASG00005004050	TRMT1	90	78.683	ENSSHAG00000014381	TRMT1	99	75.487	Sarcophilus_harrisii
ENSEASG00005004050	TRMT1	91	66.552	ENSSFOG00015004139	trmt1	85	66.552	Scleropages_formosus
ENSEASG00005004050	TRMT1	90	67.073	ENSSMAG00000021136	trmt1	85	67.073	Scophthalmus_maximus
ENSEASG00005004050	TRMT1	91	65.470	ENSSDUG00000012740	trmt1	89	64.298	Seriola_dumerili
ENSEASG00005004050	TRMT1	91	65.470	ENSSLDG00000005971	trmt1	89	64.298	Seriola_lalandi_dorsalis
ENSEASG00005004050	TRMT1	85	84.982	ENSSARG00000005138	TRMT1	96	84.982	Sorex_araneus
ENSEASG00005004050	TRMT1	91	55.119	ENSSPUG00000001084	TRMT1	91	55.290	Sphenodon_punctatus
ENSEASG00005004050	TRMT1	92	63.328	ENSSPAG00000007153	trmt1	97	63.328	Stegastes_partitus
ENSEASG00005004050	TRMT1	100	89.185	ENSSSCG00000013744	TRMT1	98	89.600	Sus_scrofa
ENSEASG00005004050	TRMT1	89	61.872	ENSTRUG00000010700	trmt1	86	62.045	Takifugu_rubripes
ENSEASG00005004050	TRMT1	90	65.271	ENSTNIG00000018808	trmt1	98	65.271	Tetraodon_nigroviridis
ENSEASG00005004050	TRMT1	100	85.557	ENSTTRG00000006379	TRMT1	95	85.577	Tursiops_truncatus
ENSEASG00005004050	TRMT1	100	88.069	ENSUAMG00000022911	TRMT1	96	88.141	Ursus_americanus
ENSEASG00005004050	TRMT1	100	87.598	ENSUMAG00000006027	TRMT1	98	87.660	Ursus_maritimus
ENSEASG00005004050	TRMT1	100	88.697	ENSVVUG00000024177	TRMT1	94	88.782	Vulpes_vulpes
ENSEASG00005004050	TRMT1	72	71.584	ENSXETG00000033863	TRMT1	92	71.584	Xenopus_tropicalis
ENSEASG00005004050	TRMT1	90	67.652	ENSXCOG00000015733	trmt1	88	68.056	Xiphophorus_couchianus
ENSEASG00005004050	TRMT1	90	67.244	ENSXMAG00000013823	trmt1	98	67.530	Xiphophorus_maculatus